void print_WAPP_hdr(struct HEADERP *hdr)
/* Output a WAPP header in human readable form */
{
int len, vers, inverted = 0;
char datetime[100];
vers = get_hdr_int(hdr, "header_version");
printf("\n Header version = %d\n", vers);
printf(" Header size (bytes) = %d\n", hdr->headlen + hdr->offset);
printf(" Source Name = %s\n", get_hdr_string(hdr, "src_name", &len));
printf(" Observation Type = %s\n", get_hdr_string(hdr, "obs_type", &len));
printf(" Observation Date (YYYMMDD) = %s\n", get_hdr_string(hdr, "obs_date", &len));
printf(" Obs Start UT (HH:MM:SS) = %s\n", get_hdr_string(hdr, "start_time", &len));
printf(" MJD start time = %.12Lf\n",
UT_strings_to_MJD(get_hdr_string(hdr, "obs_date", &len),
get_hdr_string(hdr, "start_time", &len),
datetime));
printf(" Project ID = %s\n", get_hdr_string(hdr, "project_id", &len));
printf(" Observers = %s\n", get_hdr_string(hdr, "observers", &len));
printf(" Scan Number = %d\n", get_hdr_int(hdr, "scan_number"));
printf(" RA (J2000, HHMMSS.SSSS) = %.4f\n", get_hdr_double(hdr, "src_ra"));
printf(" DEC (J2000, DDMMSS.SSSS) = %.4f\n", get_hdr_double(hdr, "src_dec"));
printf(" Start Azimuth (deg) = %-17.15g\n", get_hdr_double(hdr, "start_az"));
printf(" Start Zenith Ang (deg) = %-17.15g\n", get_hdr_double(hdr, "start_za"));
printf(" Start AST (sec) = %-17.15g\n", get_hdr_double(hdr, "start_ast"));
printf(" Start LST (sec) = %-17.15g\n", get_hdr_double(hdr, "start_lst"));
printf(" Obs Length (sec) = %-17.15g\n", get_hdr_double(hdr, "obs_time"));
printf(" Requested T_samp (us) = %-17.15g\n", get_hdr_double(hdr, "samp_time"));
printf(" Actual T_samp (us) = %-17.15g\n", get_hdr_double(hdr, "wapp_time"));
printf(" Central freq (MHz) = %-17.15g\n", get_hdr_double(hdr, "cent_freq"));
printf(" Total Bandwidth (MHz) = %-17.15g\n", get_hdr_double(hdr, "bandwidth"));
printf(" Number of lags = %d\n", get_hdr_int(hdr, "num_lags"));
printf(" Number of IFs = %d\n", get_hdr_int(hdr, "nifs"));
printf(" Samples since obs start = %lld\n", get_hdr_longlong(hdr, "timeoff"));
printf(" Other information:\n");
if (get_hdr_int(hdr, "sum") == 1) printf(" IFs are summed.\n");
if (get_hdr_int(hdr, "freqinversion")) {
inverted = (inverted == 1) ? 0 : 1;
}
if (vers >= 7) {
if (get_hdr_int(hdr, "iflo_flip")) {
inverted = (inverted == 1) ? 0 : 1;
}
}
if (inverted) printf(" Frequency band is inverted.\n");
if (get_hdr_int(hdr, "lagformat") == 0)
printf(" Lags are 16 bit integers.\n");
else
printf(" Lags are 32 bit integers.\n");
}
void read_PSRFITS_files(struct spectra_info *s)
// Read and convert PSRFITS information from a group of files
// and place the resulting info into a spectra_info structure.
{
int IMJD, SMJD, itmp, ii, status = 0;
double OFFS, dtmp;
long double MJDf;
char ctmp[80], comment[120];
s->datatype = PSRFITS;
s->fitsfiles = (fitsfile **)malloc(sizeof(fitsfile *) * s->num_files);
s->start_subint = gen_ivect(s->num_files);
s->num_subint = gen_ivect(s->num_files);
s->start_spec = (long long *)malloc(sizeof(long long) * s->num_files);
s->num_spec = (long long *)malloc(sizeof(long long) * s->num_files);
s->num_pad = (long long *)malloc(sizeof(long long) * s->num_files);
s->start_MJD = (long double *)malloc(sizeof(long double) * s->num_files);
s->N = 0;
s->num_beams = 1;
s->get_rawblock = &get_PSRFITS_rawblock;
s->offset_to_spectra = &offset_to_PSRFITS_spectra;
// By default, don't flip the band. But don't change
// the input value if it is aleady set to flip the band always
if (s->apply_flipband==-1) s->apply_flipband = 0;
// Step through the other files
for (ii = 0 ; ii < s->num_files ; ii++) {
// Is the file a PSRFITS file?
if (!is_PSRFITS(s->filenames[ii])) {
fprintf(stderr,
"\nError! File '%s' does not appear to be PSRFITS!\n",
s->filenames[ii]);
exit(1);
}
// Open the PSRFITS file
fits_open_file(&(s->fitsfiles[ii]), s->filenames[ii], READONLY, &status);
// Is the data in search mode?
fits_read_key(s->fitsfiles[ii], TSTRING, "OBS_MODE", ctmp, comment, &status);
// Quick fix for Parkes DFB data (SRCH? why????)...
if (strcmp("SRCH", ctmp)==0) {
strncpy(ctmp, "SEARCH", 40);
}
if (strcmp(ctmp, "SEARCH")) {
fprintf(stderr,
"\nError! File '%s' does not contain SEARCH-mode data!\n",
s->filenames[ii]);
exit(1);
}
// Now get the stuff we need from the primary HDU header
fits_read_key(s->fitsfiles[ii], TSTRING, "TELESCOP", ctmp, comment, &status); \
// Quick fix for MockSpec data...
if (strcmp("ARECIBO 305m", ctmp)==0) {
strncpy(ctmp, "Arecibo", 40);
}
// Quick fix for Parkes DFB data...
{
char newctmp[80];
// Copy ctmp first since strlower() is in-place
strcpy(newctmp, ctmp);
if (strcmp("parkes", strlower(remove_whitespace(newctmp)))==0) {
strncpy(ctmp, "Parkes", 40);
}
}
if (status) {
printf("Error %d reading key %s\n", status, "TELESCOP");
if (ii==0) s->telescope[0]='\0';
if (status==KEY_NO_EXIST) status=0;
} else {
if (ii==0) strncpy(s->telescope, ctmp, 40);
else if (strcmp(s->telescope, ctmp)!=0)
printf("Warning!: %s values don't match for files 0 and %d!\n",
"TELESCOP", ii);
}
get_hdr_string("OBSERVER", s->observer);
get_hdr_string("SRC_NAME", s->source);
get_hdr_string("FRONTEND", s->frontend);
get_hdr_string("BACKEND", s->backend);
get_hdr_string("PROJID", s->project_id);
get_hdr_string("DATE-OBS", s->date_obs);
get_hdr_string("FD_POLN", s->poln_type);
get_hdr_string("RA", s->ra_str);
get_hdr_string("DEC", s->dec_str);
get_hdr_double("OBSFREQ", s->fctr);
get_hdr_int("OBSNCHAN", s->orig_num_chan);
get_hdr_double("OBSBW", s->orig_df);
//get_hdr_double("CHAN_DM", s->chan_dm);
get_hdr_double("BMIN", s->beam_FWHM);
/* This is likely not in earlier versions of PSRFITS so */
/* treat it a bit differently */
fits_read_key(s->fitsfiles[ii], TDOUBLE, "CHAN_DM",
&(s->chan_dm), comment, &status);
if (status==KEY_NO_EXIST) {
status = 0;
s->chan_dm = 0.0;
}
// Don't use the macros unless you are using the struct!
fits_read_key(s->fitsfiles[ii], TINT, "STT_IMJD", &IMJD, comment, &status);
s->start_MJD[ii] = (long double) IMJD;
fits_read_key(s->fitsfiles[ii], TINT, "STT_SMJD", &SMJD, comment, &status);
fits_read_key(s->fitsfiles[ii], TDOUBLE, "STT_OFFS", &OFFS, comment, &status);
s->start_MJD[ii] += ((long double) SMJD + (long double) OFFS) / SECPERDAY;
// Are we tracking?
fits_read_key(s->fitsfiles[ii], TSTRING, "TRK_MODE", ctmp, comment, &status);
itmp = (strcmp("TRACK", ctmp)==0) ? 1 : 0;
if (ii==0) s->tracking = itmp;
else if (s->tracking != itmp)
printf("Warning!: TRK_MODE values don't match for files 0 and %d!\n", ii);
// Now switch to the SUBINT HDU header
fits_movnam_hdu(s->fitsfiles[ii], BINARY_TBL, "SUBINT", 0, &status);
get_hdr_double("TBIN", s->dt);
get_hdr_int("NCHAN", s->num_channels);
get_hdr_int("NPOL", s->num_polns);
get_hdr_string("POL_TYPE", s->poln_order);
fits_read_key(s->fitsfiles[ii], TINT, "NCHNOFFS", &itmp, comment, &status);
if (itmp > 0)
printf("Warning!: First freq channel is not 0 in file %d!\n", ii);
get_hdr_int("NSBLK", s->spectra_per_subint);
get_hdr_int("NBITS", s->bits_per_sample);
fits_read_key(s->fitsfiles[ii], TINT, "NAXIS2",
&(s->num_subint[ii]), comment, &status);
fits_read_key(s->fitsfiles[ii], TINT, "NSUBOFFS",
&(s->start_subint[ii]), comment, &status);
s->time_per_subint = s->dt * s->spectra_per_subint;
/* This is likely not in earlier versions of PSRFITS so */
/* treat it a bit differently */
fits_read_key(s->fitsfiles[ii], TFLOAT, "ZERO_OFF",
&(s->zero_offset), comment, &status);
if (status==KEY_NO_EXIST) {
status = 0;
s->zero_offset = 0.0;
}
s->zero_offset = fabs(s->zero_offset);
// Get the time offset column info and the offset for the 1st row
{
double offs_sub;
int colnum, anynull, numrows;
// Identify the OFFS_SUB column number
fits_get_colnum(s->fitsfiles[ii], 0, "OFFS_SUB", &colnum, &status);
if (status==COL_NOT_FOUND) {
printf("Warning!: Can't find the OFFS_SUB column!\n");
status = 0; // Reset status
} else {
if (ii==0) {
s->offs_sub_col = colnum;
} else if (colnum != s->offs_sub_col) {
printf("Warning!: OFFS_SUB column changes between files!\n");
}
}
// Read the OFFS_SUB column value for the 1st row
fits_read_col(s->fitsfiles[ii], TDOUBLE,
s->offs_sub_col, 1L, 1L, 1L,
0, &offs_sub, &anynull, &status);
numrows = (int)((offs_sub - 0.5 * s->time_per_subint) /
s->time_per_subint + 1e-7);
// Check to see if any rows have been deleted or are missing
if (numrows > s->start_subint[ii]) {
printf("Warning: NSUBOFFS reports %d previous rows\n"
" but OFFS_SUB implies %d. Using OFFS_SUB.\n"
" Will likely be able to correct for this.\n",
s->start_subint[ii], numrows);
}
s->start_subint[ii] = numrows;
}
// This is the MJD offset based on the starting subint number
MJDf = (s->time_per_subint * s->start_subint[ii]) / SECPERDAY;
// The start_MJD values should always be correct
s->start_MJD[ii] += MJDf;
// Compute the starting spectra from the times
MJDf = s->start_MJD[ii] - s->start_MJD[0];
if (MJDf < 0.0) {
fprintf(stderr, "Error!: File %d seems to be from before file 0!\n", ii);
exit(1);
}
s->start_spec[ii] = (long long)(MJDf * SECPERDAY / s->dt + 0.5);
// Now pull stuff from the other columns
{
float ftmp;
long repeat, width;
int colnum, anynull;
// Identify the data column and the data type
fits_get_colnum(s->fitsfiles[ii], 0, "DATA", &colnum, &status);
if (status==COL_NOT_FOUND) {
printf("Warning!: Can't find the DATA column!\n");
status = 0; // Reset status
} else {
if (ii==0) {
s->data_col = colnum;
fits_get_coltype(s->fitsfiles[ii], colnum, &(s->FITS_typecode),
&repeat, &width, &status);
} else if (colnum != s->data_col) {
printf("Warning!: DATA column changes between files!\n");
}
}
// Telescope azimuth
fits_get_colnum(s->fitsfiles[ii], 0, "TEL_AZ", &colnum, &status);
if (status==COL_NOT_FOUND) {
s->azimuth = 0.0;
status = 0; // Reset status
} else {
fits_read_col(s->fitsfiles[ii], TFLOAT, colnum,
1L, 1L, 1L, 0, &ftmp, &anynull, &status);
if (ii==0) s->azimuth = (double) ftmp;
}
// Telescope zenith angle
fits_get_colnum(s->fitsfiles[ii], 0, "TEL_ZEN", &colnum, &status);
if (status==COL_NOT_FOUND) {
s->zenith_ang = 0.0;
status = 0; // Reset status
} else {
fits_read_col(s->fitsfiles[ii], TFLOAT, colnum,
1L, 1L, 1L, 0, &ftmp, &anynull, &status);
if (ii==0) s->zenith_ang = (double) ftmp;
}
// Observing frequencies
fits_get_colnum(s->fitsfiles[ii], 0, "DAT_FREQ", &colnum, &status);
if (status==COL_NOT_FOUND) {
printf("Warning!: Can't find the channel freq column!\n");
status = 0; // Reset status
} else {
int jj;
float *freqs = (float *)malloc(sizeof(float) * s->num_channels);
fits_read_col(s->fitsfiles[ii], TFLOAT, colnum, 1L, 1L,
s->num_channels, 0, freqs, &anynull, &status);
if (ii==0) {
s->df = freqs[1]-freqs[0];
s->lo_freq = freqs[0];
s->hi_freq = freqs[s->num_channels-1];
// Now check that the channel spacing is the same throughout
for (jj = 0 ; jj < s->num_channels - 1 ; jj++) {
ftmp = freqs[jj+1] - freqs[jj];
if (fabs(ftmp - s->df) > 1e-7)
printf("Warning!: Channel spacing changes in file %d!\n", ii);
}
} else {
ftmp = fabs(s->df-(freqs[1]-freqs[0]));
if (ftmp > 1e-7)
printf("Warning!: Channel spacing changes between files!\n");
ftmp = fabs(s->lo_freq-freqs[0]);
if (ftmp > 1e-7)
printf("Warning!: Low channel changes between files!\n");
ftmp = fabs(s->hi_freq-freqs[s->num_channels-1]);
if (ftmp > 1e-7)
printf("Warning!: High channel changes between files!\n");
}
free(freqs);
}
// Data weights
fits_get_colnum(s->fitsfiles[ii], 0, "DAT_WTS", &colnum, &status);
if (status==COL_NOT_FOUND) {
printf("Warning!: Can't find the channel weights!\n");
status = 0; // Reset status
} else {
if (s->apply_weight < 0) { // Use the data to decide
int jj;
if (ii==0) {
s->dat_wts_col = colnum;
} else if (colnum != s->dat_wts_col) {
printf("Warning!: DAT_WTS column changes between files!\n");
}
float *fvec = (float *)malloc(sizeof(float) * s->num_channels);
fits_read_col(s->fitsfiles[ii], TFLOAT, s->dat_wts_col, 1L, 1L,
s->num_channels, 0, fvec, &anynull, &status);
for (jj = 0 ; jj < s->num_channels ; jj++) {
// If the weights are not 1, apply them
if (fvec[jj] != 1.0) {
s->apply_weight = 1;
break;
}
}
free(fvec);
}
if (s->apply_weight < 0) s->apply_weight = 0; // not needed
}
// Data offsets
fits_get_colnum(s->fitsfiles[ii], 0, "DAT_OFFS", &colnum, &status);
if (status==COL_NOT_FOUND) {
printf("Warning!: Can't find the channel offsets!\n");
status = 0; // Reset status
} else {
if (s->apply_offset < 0) { // Use the data to decide
int jj;
if (ii==0) {
s->dat_offs_col = colnum;
} else if (colnum != s->dat_offs_col) {
printf("Warning!: DAT_OFFS column changes between files!\n");
}
float *fvec = (float *)malloc(sizeof(float) *
s->num_channels * s->num_polns);
fits_read_col(s->fitsfiles[ii], TFLOAT, s->dat_offs_col, 1L, 1L,
s->num_channels * s->num_polns,
0, fvec, &anynull, &status);
for (jj = 0 ; jj < s->num_channels * s->num_polns ; jj++) {
// If the offsets are not 0, apply them
if (fvec[jj] != 0.0) {
s->apply_offset = 1;
break;
}
}
free(fvec);
}
if (s->apply_offset < 0) s->apply_offset = 0; // not needed
}
// Data scalings
fits_get_colnum(s->fitsfiles[ii], 0, "DAT_SCL", &colnum, &status);
if (status==COL_NOT_FOUND) {
printf("Warning!: Can't find the channel scalings!\n");
status = 0; // Reset status
} else {
if (s->apply_scale < 0) { // Use the data to decide
int jj;
if (ii==0) {
s->dat_scl_col = colnum;
} else if (colnum != s->dat_scl_col) {
printf("Warning!: DAT_SCL column changes between files!\n");
}
float *fvec = (float *)malloc(sizeof(float) *
s->num_channels * s->num_polns);
fits_read_col(s->fitsfiles[ii], TFLOAT, colnum, 1L, 1L,
s->num_channels * s->num_polns,
0, fvec, &anynull, &status);
for (jj = 0 ; jj < s->num_channels * s->num_polns ; jj++) {
// If the scales are not 1, apply them
if (fvec[jj] != 1.0) {
s->apply_scale = 1;
break;
}
}
free(fvec);
}
if (s->apply_scale < 0) s->apply_scale = 0; // not needed
}
}
// Compute the samples per file and the amount of padding
// that the _previous_ file has
s->num_pad[ii] = 0;
s->num_spec[ii] = s->spectra_per_subint * s->num_subint[ii];
if (ii > 0) {
if (s->start_spec[ii] > s->N) { // Need padding
s->num_pad[ii-1] = s->start_spec[ii] - s->N;
s->N += s->num_pad[ii-1];
}
}
s->N += s->num_spec[ii];
}
// Convert the position strings into degrees
{
int d, h, m;
double sec;
ra_dec_from_string(s->ra_str, &h, &m, &sec);
s->ra2000 = hms2rad(h, m, sec) * RADTODEG;
ra_dec_from_string(s->dec_str, &d, &m, &sec);
s->dec2000 = dms2rad(d, m, sec) * RADTODEG;
}
// Are the polarizations summed?
if ((strncmp("AA+BB", s->poln_order, 5)==0) ||
(strncmp("INTEN", s->poln_order, 5)==0))
s->summed_polns = 1;
else
s->summed_polns = 0;
// Calculate some others
s->T = s->N * s->dt;
s->orig_df /= (double) s->orig_num_chan;
s->samples_per_spectra = s->num_polns * s->num_channels;
// Note: the following is the number of bytes that will be in
// the returned array from CFITSIO.
// CFITSIO turns bits into bytes when FITS_typecode=1
// and we turn 2-bits or 4-bits into bytes if bits_per_sample < 8
if (s->bits_per_sample < 8)
s->bytes_per_spectra = s->samples_per_spectra;
else
s->bytes_per_spectra = (s->bits_per_sample * s->samples_per_spectra) / 8;
s->samples_per_subint = s->samples_per_spectra * s->spectra_per_subint;
s->bytes_per_subint = s->bytes_per_spectra * s->spectra_per_subint;
// Flip the band?
if (s->hi_freq < s->lo_freq) {
float ftmp = s->hi_freq;
s->hi_freq = s->lo_freq;
s->lo_freq = ftmp;
s->df *= -1.0;
s->apply_flipband = 1;
}
// Compute the bandwidth
s->BW = s->num_channels * s->df;
// Flip the bytes for Parkes FB_1BIT data
if (s->bits_per_sample==1 &&
strcmp(s->telescope, "Parkes")==0 &&
strcmp(s->backend, "FB_1BIT")==0) {
printf("Flipping bit ordering since Parkes FB_1BIT data.\n");
s->flip_bytes = 1;
} else {
s->flip_bytes = 0;
}
// Allocate the buffers
cdatabuffer = gen_bvect(s->bytes_per_subint);
// Following is twice as big because we use it as a ringbuffer too
fdatabuffer = gen_fvect(2 * s->spectra_per_subint * s->num_channels);
s->padvals = gen_fvect(s->num_channels);
for (ii = 0 ; ii < s->num_channels ; ii++)
s->padvals[ii] = 0.0;
offsets = gen_fvect(s->num_channels * s->num_polns);
scales = gen_fvect(s->num_channels * s->num_polns);
weights = gen_fvect(s->num_channels);
// Initialize these if we won't be reading them from the file
if (s->apply_offset==0)
for (ii = 0 ; ii < s->num_channels * s->num_polns ; ii++)
offsets[ii] = 0.0;
if (s->apply_scale==0)
for (ii = 0 ; ii < s->num_channels * s->num_polns ; ii++)
scales[ii] = 1.0;
if (s->apply_weight==0)
for (ii = 0 ; ii < s->num_channels ; ii++)
weights[ii] = 1.0;
}
void fill_psrfits_struct(int numwapps, int numbits, struct HEADERP *h,
struct wappinfo *w, struct psrfits *pf)
{
int slen, ii;
char *cptr;
pf->filenum = 0; // Crucial for initialization
pf->hdr.nsblk = (int) (1.0 / w->dt); // _might_ be a problem...
// Now set values for our hdrinfo structure
strcpy(pf->hdr.telescope, "Arecibo");
cptr = get_hdr_string(h, "obs_type", &slen);
if (strncmp("PULSAR_SEARCH", cptr, slen) == 0) {
strcpy(pf->hdr.obs_mode, "SEARCH");
} else {
printf("Error: Wapp data is not in search format!\n\n");
exit(1);
}
strcpy(pf->hdr.backend, "WAPP");
cptr = get_hdr_string(h, "frontend", &slen);
if(cptr != NULL)
strncpy(pf->hdr.frontend, cptr, slen);
else
strncpy(pf->hdr.frontend, "alfa", 4);
cptr = get_hdr_string(h, "observers", &slen);
strncpy(pf->hdr.observer, cptr, slen);
cptr = get_hdr_string(h, "project_id", &slen);
strncpy(pf->hdr.project_id, cptr, slen);
cptr = get_hdr_string(h, "src_name", &slen);
strncpy(pf->hdr.source, cptr, slen);
strcpy(pf->hdr.date_obs, w->date_obs);
pf->hdr.scanlen = get_hdr_double(h, "obs_time");
strcpy(pf->hdr.poln_type, "LIN"); // set based on known receivers
if (get_hdr_int(h, "sum")) {
strcpy(pf->hdr.poln_order, "AA+BB");
pf->hdr.summed_polns = 1;
} else if (w->numifs == 1) {
strcpy(pf->hdr.poln_order, "AA");
pf->hdr.summed_polns = 0;
}
strcpy(pf->hdr.track_mode, "TRACK"); // Potentially not-true?
strcpy(pf->hdr.cal_mode, "OFF"); // Potentially not-true?
strcpy(pf->hdr.feed_mode, "FA"); // check this...
pf->hdr.beamnum = 0;
if (get_hdr_int(h, "isalfa"))
pf->hdr.beamnum = w->beamnum;
pf->hdr.dt = w->dt;
pf->hdr.fctr = w->fctr + 0.5 * (numwapps - 1.0) * w->BW;
pf->hdr.BW = w->BW * numwapps;
pf->hdr.beam_FWHM = beam_FWHM(pf->hdr.fctr, 300.0);
pf->hdr.nchan = w->numchans * numwapps;
pf->hdr.orig_nchan = w->numchans * numwapps;
pf->hdr.orig_df = pf->hdr.df = pf->hdr.BW / pf->hdr.nchan;
pf->hdr.nbits = numbits;
pf->hdr.npol = w->numifs;
pf->hdr.MJD_epoch = w->MJD_epoch;
pf->hdr.start_day = (int) (w->MJD_epoch);
pf->hdr.start_sec = (w->MJD_epoch - pf->hdr.start_day) * 86400.0;
pf->hdr.scan_number = get_hdr_int(h, "scan_number");
pf->hdr.ra2000 = w->ra;
dec2hms(pf->hdr.ra_str, pf->hdr.ra2000 / 15.0, 0);
pf->hdr.dec2000 = w->dec;
dec2hms(pf->hdr.dec_str, pf->hdr.dec2000, 1);
pf->hdr.azimuth = get_hdr_double(h, "start_az");
pf->hdr.zenith_ang = get_hdr_double(h, "start_za");
pf->hdr.rcvr_polns = 2;
pf->hdr.offset_subint = 0;
pf->hdr.onlyI = 0;
pf->hdr.ds_time_fact = 1;
pf->hdr.ds_freq_fact = 1;
pf->hdr.chan_dm = 0.0;
pf->hdr.fd_hand = pf->hdr.be_phase = 0; // This is almost certainly not correct
pf->hdr.fd_sang = pf->hdr.fd_xyph = 0.0; // This is almost certainly not correct
pf->hdr.feed_angle = 0.0; // This is almost certainly not correct
pf->hdr.cal_freq = pf->hdr.cal_dcyc = pf->hdr.cal_phs = 0.0; // ditto
// Now set values for our subint structure
pf->sub.tel_az = get_hdr_double(h, "start_az");
pf->sub.tel_zen = get_hdr_double(h, "start_za");
pf->sub.lst = get_hdr_double(h, "start_lst");
pf->hdr.start_lst = pf->sub.lst;
pf->sub.tsubint = pf->hdr.nsblk * pf->hdr.dt;
pf->sub.ra = pf->hdr.ra2000;
pf->sub.dec = pf->hdr.dec2000;
pf->sub.offs = 0.5 * pf->sub.tsubint;
slaEqgal(pf->hdr.ra2000 * DEGTORAD, pf->hdr.dec2000 * DEGTORAD,
&pf->sub.glon, &pf->sub.glat);
pf->sub.glon *= RADTODEG;
pf->sub.glat *= RADTODEG;
// The following three are unknown or hard to get, I think (SMR)
pf->sub.feed_ang = 0.0;
pf->sub.pos_ang = 0.0;
pf->sub.par_ang = 0.0;
pf->sub.bytes_per_subint = (pf->hdr.nbits * pf->hdr.nchan *
pf->hdr.npol * pf->hdr.nsblk) / 8;
pf->sub.FITS_typecode = TBYTE; // 11 = byte
// Create and initialize the subint arrays
pf->sub.dat_freqs = gen_fvect(pf->hdr.nchan);
pf->sub.dat_weights = gen_fvect(pf->hdr.nchan);
for (ii = 0; ii < pf->hdr.nchan; ii++) {
pf->sub.dat_freqs[ii] = w->lofreq + ii * pf->hdr.df;
pf->sub.dat_weights[ii] = 1.0;
}
// The following are re-set to try to preserve the band shape later
pf->sub.dat_offsets = gen_fvect(pf->hdr.nchan * pf->hdr.npol);
pf->sub.dat_scales = gen_fvect(pf->hdr.nchan * pf->hdr.npol);
for (ii = 0; ii < pf->hdr.nchan * pf->hdr.npol; ii++) {
pf->sub.dat_offsets[ii] = 0.0;
pf->sub.dat_scales[ii] = 1.0;
}
// This is the raw data block that will be updated
// for each row of the PSRFITS file
pf->sub.data = gen_bvect(pf->sub.bytes_per_subint);
}
static void set_wappinfo(struct HEADERP *h, struct wappinfo *w)
{
int ival;
// Header version
w->header_version = get_hdr_int(h, "header_version");
// Header Length
w->header_size = h->headlen + h->offset;
// Number of channels (i.e. lags)
w->numchans = get_hdr_int(h, "num_lags");
// Number of IFs (i.e. polns) in the data
w->numifs = get_hdr_int(h, "nifs");
if (w->numifs > 1) {
printf("\nERROR: wapp2psrfits cannot (yet?) handle more than 1 IF!\n\n");
exit(1);
}
// 16- or 32-bit lags
ival = get_hdr_int(h, "lagformat");
if (ival == 0)
w->bits_per_lag = 16;
else if (ival == 1)
w->bits_per_lag = 32;
else {
printf("\nERROR: Unrecognized bits per sample (%d, 'lagformat')!\n\n",
w->bits_per_lag);
exit(1);
}
// How many bytes are there in a sample in time (i.e. all the lags)
w->bytes_per_sample = (w->bits_per_lag / 8) * w->numifs * w->numchans;
// 3- or 9-level correlations
ival = get_hdr_int(h, "level");
if (ival == 1)
w->corr_level = 3;
else if (ival == 2)
w->corr_level = 9;
else {
printf("\nERROR: Unrecognized 'level' setting! (%d)\n\n", w->corr_level);
exit(1);
}
// Is the band inverted? (i.e. lower sideband)
w->invertband = 0;
if (get_hdr_int(h, "freqinversion")) {
w->invertband = (w->invertband == 1) ? 0 : 1;
}
// These two parameters are cumulative...
if (w->header_version >= 7) {
if (get_hdr_int(h, "iflo_flip")) {
w->invertband = (w->invertband == 1) ? 0 : 1;
}
}
// Sampling time in sec
w->dt = get_hdr_double(h, "wapp_time") / 1.0e6;
// Bandwidth in MHz
w->BW = get_hdr_double(h, "bandwidth");
// Center freq of the band
w->fctr = get_hdr_double(h, "cent_freq");
// Channel BW in MHz
w->df = fabs(w->BW / w->numchans);
// Center freq of the lowest freq channel
// See: http://www.cv.nrao.edu/~pdemores/wapp/
// Note: If band is inverted, since we reorder the channels
// explicitly, we don't need to use the negative "B"
// factor from Paul's webpage above. And the following
// is correct for USB or LSB data.
w->lofreq = w->fctr - 0.5 * w->BW + 0.5 * w->df;
// Correlator scaling
{
double dtus, corr_rate;
dtus = w->dt * 1.0e6;
corr_rate = 1.0 / (dtus - WAPP_DEADTIME);
w->corr_scale = corr_rate / w->BW;
// Correction for narrow band use
if (w->BW < 50.0)
w->corr_scale = corr_rate / 50.0;
if (w->corr_level == 9) // 9-level sampling
w->corr_scale /= 16.0;
if (get_hdr_int(h, "sum")) // summed IFs (search mode)
w->corr_scale /= 2.0;
w->corr_scale *= pow(2.0, (double) get_hdr_int(h, "lagtrunc"));
}
// RA (J2000) in decimal degrees
{
double hr, m, s, dval;
dval = get_hdr_double(h, "src_ra");
hr = (int) floor(dval / 10000.0);
m = (int) floor((dval - hr * 10000) / 100.0);
s = dval - hr * 10000 - m * 100;
w->ra = (hr + (m + s / 60.0) / 60.0) * 15.0;
}
// DEC (J2000) in decimal degrees
{
double d, m, s, dval;
dval = get_hdr_double(h, "src_dec");
d = (int) floor(fabs(dval) / 10000.0);
m = (int) floor((fabs(dval) - d * 10000) / 100.0);
s = fabs(dval) - d * 10000 - m * 100;
w->dec = (d + (m + s / 60.0) / 60.0);
if (dval < 0.0)
w->dec = -w->dec;
}
// Epoch (MJD) of the first sample
{
int len;
char *cptr1, *cptr2;
cptr1 = get_hdr_string(h, "obs_date", &len);
cptr2 = get_hdr_string(h, "start_time", &len);
w->MJD_epoch = UT_strings_to_MJD(cptr1, cptr2, w->date_obs);
}
}
