int main(int argc, char *argv[])
{
char *listName = "finished.new";
char *fofName = "unfinished_acc.fof";
char *outName = "frags.txt";
FILE *out = mustOpen(outName, "w");
struct fof *fof = fofOpen(fofName, NULL);
struct kvt *kvt = newKvt(64);
char line[512];
int lineCount = 0;
FILE *lf;
char *keyText;
char *s, *t;
int size;
lf = mustOpen(listName, "r");
while (fgets(line, sizeof(line), lf))
{
++lineCount;
kvtClear(kvt);
s = trimSpaces(line);
t = strchr(s, '.');
if (t != NULL)
*t = 0;
keyText = fofFetchString(fof, s, &size);
kvtParseAdd(kvt, keyText);
fprintf(out, "%s phase %s frags %s\n", s, kvtLookup(kvt, "pha"), kvtLookup(kvt, "frg"));
freez(&keyText);
}
freeKvt(&kvt);
return 0;
}
void scanFile(struct keyExp *exp, char *fileName)
/* Scan file for things that match expression. */
{
FILE *f = mustOpen(fileName, "r");
int keyBufSize = 32*1024;
char *keysBuf = needMem(keyBufSize+1);
int lastc, c;
int kbIx;
int modMax = 10000;
int mod = modMax;
printf("scanning %s", fileName);
fflush(stdout);
for (;;)
{
if (--mod <= 0)
{
printf(".");
fflush(stdout);
mod = modMax;
}
kvtClear(kvt);
kbIx = 0;
lastc = 0;
for (;;)
{
if (((c = fgetc(f)) == EOF) || (c == '\n' && lastc == '\n'))
break;
keysBuf[kbIx] = c;
if (++kbIx >= keyBufSize)
errAbort("Record too long\n");
lastc = c;
}
if (kbIx > 0)
{
kvtParseAdd(kvt, keysBuf);
if (exp == NULL || keyExpEval(exp, kvt))
{
++matchCount;
if (command == ctPrint)
{
char *kv = kvtLookup(kvt, selectKey);
if (kv == NULL)
kv = "NULL";
fprintf(out, "%s\n", kv);
}
if (command == ctStats || command == ctHist)
{
char *kv = kvtLookup(kvt, selectKey);
struct useCount *u;
struct hashEl *hel;
if (kv == NULL)
kv = "NULL";
if ((hel = hashLookup(statHash, kv)) == NULL)
{
AllocVar(u);
hel = hashAdd(statHash, kv, u);
u->what = hel->name;
u->count = 1;
slAddHead(&useCounts, u);
}
else
{
u = hel->val;
++u->count;
}
}
}
}
if (c == EOF)
break;
}
freeMem(keysBuf);
fclose(f);
printf("\n");
}