void Plugin14CRefView::setDate(const Date& d, const ProjectSettings& settings)
{
QLocale locale=QLocale();
GraphViewRefAbstract::setDate(d, settings);
Date date = d;
mGraph->removeAllCurves();
mGraph->clearInfos();
mGraph->showInfos(true);
mGraph->setRangeX(mSettings.mTmin, mSettings.mTmax);
mGraph->setCurrentX(mSettings.mTmin, mSettings.mTmax);
mGraph->setFormatFunctX(mFormatFuncX);
if(!date.isNull())
{
double age = date.mData.value(DATE_14C_AGE_STR).toDouble();
double error = date.mData.value(DATE_14C_ERROR_STR).toDouble();
double delta_r = date.mData.value(DATE_14C_DELTA_R_STR).toDouble();
double delta_r_error = date.mData.value(DATE_14C_DELTA_R_ERROR_STR).toDouble();
QString ref_curve = date.mData.value(DATE_14C_REF_CURVE_STR).toString().toLower();
// ----------------------------------------------
// Reference curve
// ----------------------------------------------
QColor color2(150, 150, 150);
Plugin14C* plugin = (Plugin14C*)date.mPlugin;
const QMap<QString, QMap<double, double> >& curves = plugin->getRefData(ref_curve);
QMap<double, double> curveG;
QMap<double, double> curveG95Sup;
QMap<double, double> curveG95Inf;
double yMin = curves["G95Inf"][mSettings.mTmin];
double yMax = curves["G95Sup"][mSettings.mTmin];
double tMinGraph=curves["G"].firstKey()>mSettings.mTmin ? curves["G"].firstKey(): mSettings.mTmin;
double tMaxGraph=curves["G"].lastKey()<mSettings.mTmax ? curves["G"].lastKey() : mSettings.mTmax;
for(double t=tMinGraph; t<=tMaxGraph; ++t) {
curveG[t] = curves["G"][t];
curveG95Sup[t] = curves["G95Sup"][t];
curveG95Inf[t] = curves["G95Inf"][t];
yMin = qMin(yMin, curveG95Inf[t]);
yMax = qMax(yMax, curveG95Sup[t]);
}
GraphCurve graphCurveG;
graphCurveG.mName = "G";
graphCurveG.mData = curveG;
graphCurveG.mPen.setColor(Qt::blue);
graphCurveG.mIsHisto = false;
mGraph->addCurve(graphCurveG);
GraphCurve graphCurveG95Sup;
graphCurveG95Sup.mName = "G95Sup";
graphCurveG95Sup.mData = curveG95Sup;
graphCurveG95Sup.mPen.setColor(QColor(180, 180, 180));
graphCurveG95Sup.mIsHisto = false;
mGraph->addCurve(graphCurveG95Sup);
GraphCurve graphCurveG95Inf;
graphCurveG95Inf.mName = "G95Inf";
graphCurveG95Inf.mData = curveG95Inf;
graphCurveG95Inf.mPen.setColor(QColor(180, 180, 180));
graphCurveG95Inf.mIsHisto = false;
mGraph->addCurve(graphCurveG95Inf);
// Display reference curve name
mGraph->addInfo(tr("Ref : ") + ref_curve);
// -------------------------------------------
yMin = qMin(yMin, age);
yMin = floor(yMin/10)*10;
yMax = qMax(yMax, age);
yMax = ceil(yMax/10)*10;
mGraph->setRangeY(yMin, yMax);
// ----------------------------------------------
// Measure curve
// ----------------------------------------------
GraphCurve curveMeasure;
curveMeasure.mName = "Measure";
QColor penColor(mMeasureColor);
QColor brushColor(mMeasureColor);
// Lower opacity in case of delta r not null
if(delta_r != 0 && delta_r_error != 0){
penColor.setAlpha(100);
brushColor.setAlpha(15);
}else{
penColor.setAlpha(255);
brushColor.setAlpha(50);
}
curveMeasure.mPen = penColor;
curveMeasure.mBrush = brushColor;
curveMeasure.mIsVertical = true;
curveMeasure.mIsHisto = false;
// 5000 pts are used on vertical measure
// because the y scale auto adjusts depending on x zoom.
// => the visible part of the measure may be very reduced !
double step = (yMax - yMin) / 5000.;
for(double t=yMin; t<yMax; t += step)
{
double v = exp(-0.5 * pow((age - t) / error, 2));
curveMeasure.mData[t] = v;
}
curveMeasure.mData = normalize_map(curveMeasure.mData);
mGraph->addCurve(curveMeasure);
// Infos to write :
QString info = tr("Age BP : ") + locale.toString(age) + " ± " + locale.toString(error);
// ----------------------------------------------
// Delta R curve
// ----------------------------------------------
if(delta_r != 0 && delta_r_error != 0)
{
// Apply reservoir effect
age = (age - delta_r);
error = sqrt(error * error + delta_r_error * delta_r_error);
GraphCurve curveDeltaR;
curveDeltaR.mName = "Delta R";
penColor = mMeasureColor;
brushColor = mMeasureColor;
brushColor.setAlpha(50);
curveDeltaR.mPen = penColor;
curveDeltaR.mBrush = brushColor;
curveDeltaR.mIsVertical = true;
curveDeltaR.mIsHisto = false;
// 5000 pts are used on vertical measure
// because the y scale auto adjusts depending on x zoom.
// => the visible part of the measure may be very reduced !
step = (yMax - yMin) / 5000.;
for(double t=yMin; t<yMax; t += step)
{
double v = exp(-0.5 * pow((age - t) / error, 2));
curveDeltaR.mData[t] = v;
}
curveDeltaR.mData = normalize_map(curveDeltaR.mData);
mGraph->addCurve(curveDeltaR);
info += tr(", ΔR : ") + locale.toString(delta_r) + " ± " + locale.toString(delta_r_error);
}
// ----------------------------------------------
// Sub-dates curves (combination)
// ----------------------------------------------
for(int i=0; i<date.mSubDates.size(); ++i){
const Date& d = date.mSubDates[i];
GraphCurve curveSubMeasure;
curveSubMeasure.mName = "Sub-Measure " + QString::number(i);
QColor penColor = QColor(167, 126, 73);
QColor brushColor = QColor(167, 126, 73);
double sub_age = d.mData.value(DATE_14C_AGE_STR).toDouble();
double sub_error = d.mData.value(DATE_14C_ERROR_STR).toDouble();
double sub_delta_r = d.mData.value(DATE_14C_DELTA_R_STR).toDouble();
double sub_delta_r_error = d.mData.value(DATE_14C_DELTA_R_ERROR_STR).toDouble();
// Apply reservoir effect
sub_age = (sub_age - sub_delta_r);
sub_error = sqrt(sub_error * sub_error + sub_delta_r_error * sub_delta_r_error);
penColor.setAlpha(255);
brushColor.setAlpha(50);
curveSubMeasure.mPen = penColor;
curveSubMeasure.mBrush = brushColor;
curveSubMeasure.mIsVertical = true;
curveSubMeasure.mIsHisto = false;
// 5000 pts are used on vertical measure
// because the y scale auto adjusts depending on x zoom.
// => the visible part of the measure may be very reduced !
double step = (yMax - yMin) / 5000.;
for(double t=yMin; t<yMax; t += step)
{
double v = exp(-0.5 * pow((sub_age - t) / sub_error, 2));
curveSubMeasure.mData[t] = v;
}
curveSubMeasure.mData = normalize_map(curveSubMeasure.mData);
mGraph->addCurve(curveSubMeasure);
}
// ----------------------------------------------
// Textual info
// ----------------------------------------------
mGraph->addInfo(info);
// ----------------------------------------------
// Error on measure (horizontal lines)
// ----------------------------------------------
GraphCurve curveMeasureAvg;
curveMeasureAvg.mName = "MeasureAvg";
curveMeasureAvg.mPen.setColor(mMeasureColor);
curveMeasureAvg.mPen.setStyle(Qt::SolidLine);
curveMeasureAvg.mIsHorizontalLine = true;
GraphCurve curveMeasureSup;
curveMeasureSup.mName = "MeasureSup";
curveMeasureSup.mPen.setColor(mMeasureColor);
curveMeasureSup.mPen.setStyle(Qt::DashLine);
curveMeasureSup.mIsHorizontalLine = true;
GraphCurve curveMeasureInf;
curveMeasureInf.mName = "MeasureInf";
curveMeasureInf.mPen.setColor(mMeasureColor);
curveMeasureInf.mPen.setStyle(Qt::DashLine);
curveMeasureInf.mIsHorizontalLine = true;
curveMeasureAvg.mHorizontalValue = age;
curveMeasureSup.mHorizontalValue = age + error;
curveMeasureInf.mHorizontalValue = age - error;
mGraph->addCurve(curveMeasureAvg);
mGraph->addCurve(curveMeasureSup);
mGraph->addCurve(curveMeasureInf);
}
}
void PluginGaussRefView::setDate(const Date& d, const ProjectSettings& settings)
{
QLocale locale=QLocale();
GraphViewRefAbstract::setDate(d, settings);
Date date = d;
mGraph->removeAllCurves();
mGraph->clearInfos();
mGraph->showInfos(true);
mGraph->setRangeX(mSettings.mTmin, mSettings.mTmax);
mGraph->setCurrentX(mSettings.mTmin, mSettings.mTmax);
mGraph->setFormatFunctX(mFormatFuncX);
if(!date.isNull())
{
double age = date.mData.value(DATE_GAUSS_AGE_STR).toDouble();
double error = date.mData.value(DATE_GAUSS_ERROR_STR).toDouble();
double a = date.mData.value(DATE_GAUSS_A_STR).toDouble();
double b = date.mData.value(DATE_GAUSS_B_STR).toDouble();
double c = date.mData.value(DATE_GAUSS_C_STR).toDouble();
QString mode = date.mData.value(DATE_GAUSS_MODE_STR).toString();
QString ref_curve = date.mData.value(DATE_GAUSS_CURVE_STR).toString();
// ----------------------------------------------
// Reference curve
// ----------------------------------------------
GraphCurve curve;
curve.mName = "Reference";
curve.mPen.setColor(Qt::blue);
curve.mIsHisto = false;
double yMin;
double yMax;
if(mode == DATE_GAUSS_MODE_NONE)
{
/*for(double t=mSettings.mTmin; t<=mSettings.mTmax; t+=mSettings.mStep)
curve.mData[t] = t;
mGraph->addCurve(curve);
// Adjust scale :
yMin = mSettings.mTmin;
yMax = mSettings.mTmax;
yMin = qMin(yMin, age);
yMax = qMax(yMax, age);
mGraph->setRangeY(yMin, yMax);
*/
}
else if(mode == DATE_GAUSS_MODE_EQ)
{
for(double t=mSettings.mTmin; t<=mSettings.mTmax; t+=mSettings.mStep)
curve.mData[t] = a * t * t + b * t + c;
mGraph->addCurve(curve);
// Adjust scale :
yMin = map_min_value(curve.mData);
yMax = map_max_value(curve.mData);
yMin = qMin(yMin, age);
yMax = qMax(yMax, age);
mGraph->setRangeY(yMin, yMax);
}
else if(mode == DATE_GAUSS_MODE_CURVE)
{
PluginGauss* plugin = (PluginGauss*)date.mPlugin;
const QMap<QString, QMap<double, double> >& curves = plugin->getRefData(ref_curve);
QMap<double, double> curveG;
QMap<double, double> curveG95Sup;
QMap<double, double> curveG95Inf;
yMin = curves["G95Inf"][mSettings.mTmin];
yMax = curves["G95Sup"][mSettings.mTmin];
double tMinGraph=curves["G"].firstKey()>mSettings.mTmin ? curves["G"].firstKey(): mSettings.mTmin;
double tMaxGraph=curves["G"].lastKey()<mSettings.mTmax ? curves["G"].lastKey() : mSettings.mTmax;
for(double t=tMinGraph; t<=tMaxGraph; ++t) {
curveG[t] = curves["G"][t];
curveG95Sup[t] = curves["G95Sup"][t];
curveG95Inf[t] = curves["G95Inf"][t];
yMin = qMin(yMin, curveG95Inf[t]);
yMax = qMax(yMax, curveG95Sup[t]);
}
GraphCurve graphCurveG;
graphCurveG.mName = "G";
graphCurveG.mData = curveG;
graphCurveG.mPen.setColor(Qt::blue);
graphCurveG.mIsHisto = false;
mGraph->addCurve(graphCurveG);
GraphCurve graphCurveG95Sup;
graphCurveG95Sup.mName = "G95Sup";
graphCurveG95Sup.mData = curveG95Sup;
graphCurveG95Sup.mPen.setColor(QColor(180, 180, 180));
graphCurveG95Sup.mIsHisto = false;
mGraph->addCurve(graphCurveG95Sup);
GraphCurve graphCurveG95Inf;
graphCurveG95Inf.mName = "G95Inf";
graphCurveG95Inf.mData = curveG95Inf;
graphCurveG95Inf.mPen.setColor(QColor(180, 180, 180));
graphCurveG95Inf.mIsHisto = false;
mGraph->addCurve(graphCurveG95Inf);
// Display reference curve name
mGraph->addInfo(tr("Ref : ") + ref_curve);
// Adjust scale :
yMin = qMin(yMin, age);
yMin = floor(yMin/10)*10;
yMax = qMax(yMax, age);
yMax = ceil(yMax/10)*10;
mGraph->setRangeY(yMin, yMax);
}
if(mode != DATE_GAUSS_MODE_NONE)
{
// ----------------------------------------------
// Measure curve
// ----------------------------------------------
GraphCurve curveMeasure;
curveMeasure.mName = "Measure";
curveMeasure.mPen.setColor(mMeasureColor);
QColor curveColor(mMeasureColor);
curveColor.setAlpha(50);
curveMeasure.mBrush = curveColor;
curveMeasure.mIsVertical = true;
curveMeasure.mIsHisto = false;
// 5000 pts are used on vertical measure
// because the y scale auto adjusts depending on x zoom.
// => the visible part of the measure may be very reduced !
double step = (yMax - yMin) / 5000.;
for(double t=yMin; t<yMax; t += step)
{
double v = exp(-0.5 * pow((t - age) / error, 2));
curveMeasure.mData[t] = v;
}
curveMeasure.mData = normalize_map(curveMeasure.mData);
mGraph->addCurve(curveMeasure);
// Write measure value :
mGraph->addInfo(tr("Measure : ") + locale.toString(age) + " ± " + locale.toString(error));
// ----------------------------------------------
// Error on measure
// ----------------------------------------------
GraphCurve curveMeasureAvg;
curveMeasureAvg.mName = "MeasureAvg";
curveMeasureAvg.mPen.setColor(mMeasureColor);
curveMeasureAvg.mPen.setStyle(Qt::SolidLine);
curveMeasureAvg.mIsHorizontalLine = true;
GraphCurve curveMeasureSup;
curveMeasureSup.mName = "MeasureSup";
curveMeasureSup.mPen.setColor(mMeasureColor);
curveMeasureSup.mPen.setStyle(Qt::DashLine);
curveMeasureSup.mIsHorizontalLine = true;
GraphCurve curveMeasureInf;
curveMeasureInf.mName = "MeasureInf";
curveMeasureInf.mPen.setColor(mMeasureColor);
curveMeasureInf.mPen.setStyle(Qt::DashLine);
curveMeasureInf.mIsHorizontalLine = true;
curveMeasureAvg.mHorizontalValue = age;
curveMeasureSup.mHorizontalValue = age + error;
curveMeasureInf.mHorizontalValue = age - error;
mGraph->addCurve(curveMeasureAvg);
mGraph->addCurve(curveMeasureSup);
mGraph->addCurve(curveMeasureInf);
}
}
}
void EventKnownItem::setEvent(const QJsonObject& event, const QJsonObject& settings)
{
prepareGeometryChange();
mData = event;
// ----------------------------------------------
// Update item position and selection
// ----------------------------------------------
setSelected(mData[STATE_IS_SELECTED].toBool());
setPos(mData[STATE_ITEM_X].toDouble(),
mData[STATE_ITEM_Y].toDouble());
// ----------------------------------------------
// Check if item should be greyed out
// ----------------------------------------------
//updateGreyedOut();
// ----------------------------------------------
// Recreate thumb
// ----------------------------------------------
double tmin = settings[STATE_SETTINGS_TMIN].toDouble();
double tmax = settings[STATE_SETTINGS_TMAX].toDouble();
double step = settings[STATE_SETTINGS_STEP].toDouble();
EventKnown bound = EventKnown::fromJson(event);
bound.updateValues(tmin, tmax, step);
/*QRectF rect = boundingRect();
double side = 40.f;
double top = 25.f;
QRectF thumbRect(rect.x() + side, rect.y() + top + mEltsMargin + mTitleHeight, rect.width() - 2*side, mThumbH);*/
GraphView* graph = new GraphView();
//graph->setFixedSize(thumbRect.width(), thumbRect.height());
graph->setFixedSize(200, 50);
graph->setMargins(0, 0, 0, 0);
graph->setRangeX(tmin, tmax);
graph->setCurrentX(tmin, tmax);
graph->setRangeY(0, 1.1f);
graph->showXAxisArrow(false);
graph->showXAxisTicks(false);
graph->showXAxisSubTicks(false);
graph->showXAxisValues(false);
graph->showYAxisArrow(false);
graph->showYAxisTicks(false);
graph->showYAxisSubTicks(false);
graph->showYAxisValues(false);
graph->setXAxisMode(GraphView::eHidden);
graph->setYAxisMode(GraphView::eHidden);
GraphCurve curve;
curve.mData = normalize_map(bound.mValues);
curve.mName = "Bound";
curve.mPen = QPen(Painting::mainColorLight, 2.f);
curve.mBrush = Painting::mainColorLight;
curve.mIsRectFromZero = true;
curve.mIsHisto = (bound.knownType() == EventKnown::eUniform);
graph->addCurve(curve);
graph->setFormatFunctX(DateUtils::convertToAppSettingsFormatStr);
graph->mLegendX = DateUtils::getAppSettingsFormat();
mThumb = QPixmap(graph->size());
graph->render(&mThumb);
delete graph;
// ----------------------------------------------
// Repaint based on mEvent
// ----------------------------------------------
update();
}
/*
* Force maps map[0 ... n-1] to be all distinct by updating them.
* - store = particle store to create fresh indices
* - f = type descriptor for all the maps in the array
* - n must be positive
*
* Technique used:
* - create fresh indices i_1,..,i_k in the domain of f
* - create c values a_1,..., a_c in the range of f
* such that (c ^ k) >= n.
* Update map[t] by adding [i_1 -> a_t1, ..., i_k -> a_tk]
* in such a way that (t1, ...., tk) differ from (u1, ..., uk) when u/=t.
*
* Return false if that's not possible (i.e., the number of functions
* of the type f is finite and smaller than n).
*/
bool force_maps_to_differ(pstore_t *store, function_type_t *f, uint32_t n, map_t **map) {
type_table_t *types;
particle_t *idx;
particle_t *a;
uint32_t *tuple;
type_t tau;
uint32_t i, j, k, c;
types = store->types;
tau = f->range;
if (is_unit_type(types, tau)) {
return false;
}
if (is_finite_type(types, tau)) {
c = type_card(types, tau);
k = ceil_log(c, n);
} else {
c = n;
k = 1;
}
assert(k>0 && c>0 && upower32(c, k) >= n);
// tuple + index array are of size k
// a is of size c
tuple = (uint32_t *) safe_malloc(k * sizeof(uint32_t));
idx = (particle_t *) safe_malloc(k * sizeof(particle_t));
a = (particle_t *) safe_malloc(c * sizeof(particle_t));
// initialize the idx array with fresh values
if (f->ndom == 1) {
for (i=0; i<k; i++) {
idx[i] = get_new_particle(store, f->domain[0]);
if (idx[i] == null_particle) goto failed;
}
} else {
for (i=0; i<k; i++) {
idx[i] = get_new_tuple(store, f->ndom, f->domain);
if (idx[i] == null_particle) goto failed;
}
}
// fill-in a with c distinct values of type tau
for (i=0; i<c; i++) {
a[i] = get_distinct_particle(store, tau, i, a);
assert(a[i] != null_particle);
}
// initialize tuple = (0,...,0)
for (i=0; i<k; i++) {
tuple[i] = 0;
}
// update then normalize the maps
i = 0;
for (;;) {
assert(i < n);
for (j=0; j<k; j++) {
assert(tuple[j] < c);
add_elem_to_map(map[i], idx[j], a[tuple[j]]);
}
normalize_map(map[i]);
i ++;
if (i == n) break;
tuple_successor(tuple, k, c);
}
safe_free(a);
safe_free(idx);
safe_free(tuple);
return true;
failed:
safe_free(a);
safe_free(idx);
safe_free(tuple);
return false;
}