void robust::solve(real a, real b){
real tol_bis = cfratio * tol;
bisection bis(f,tol_bis,maxit/2,criteria);
bis.solve(a,b);
real x_d=bis.get_result();
newton nwt(f,fprime,tol,maxit/2,criteria);
nwt.solve(x_d);
alpha=nwt.get_result();
done=true;
nit_coarse=bis.get_iter();
nit=nwt.get_iter();
return;
}
void test_crosschannelregistration(UnitTest &ut) {
ut.begin_test_set("CrossChannelRegistration");
Segmentation<uint16> segmenter;
EuclideanDistanceMap<uint16> edm;
Watershed<uint16> wat;
Invert<uint16> inv;
NWThreshold<uint16> nwt(5,0.5,60000,NWThreshold<uint16>::mask_type_square);//0.75 beautiful
SwiftImage<uint16> c1a_i1("./Images/smallfake2/c1_a.tif");
cout << "Load complete" << endl;
SwiftImage<uint16> c1a_i2 = nwt.process(c1a_i1);
cout << "Thresholding complete" << endl;
SwiftImage<uint16> c1a_i3 = edm.process(c1a_i2);
cout << "EDM complete" << endl;
SwiftImage<uint16> c1a_i4 = inv.process(c1a_i3);
cout << "INV complete" << endl;
SwiftImage<uint16> c1a_i5 = wat.process(c1a_i4);
cout << "Wat complete" << endl;
SwiftImage<uint16> c1a_i6 = c1a_i2 && c1a_i5;
vector<SwiftImageObject<> > c1a_objs1 = segmenter.process(c1a_i6);
SwiftImage<uint16> c2a_i1("./Images/smallfake2/c2_a.tif");
cout << "Load complete" << endl;
SwiftImage<uint16> c2a_i2 = nwt.process(c2a_i1);
cout << "Thresholding complete" << endl;
SwiftImage<uint16> c2a_i3 = edm.process(c2a_i2);
cout << "EDM complete" << endl;
SwiftImage<uint16> c2a_i4 = inv.process(c2a_i3);
cout << "INV complete" << endl;
SwiftImage<uint16> c2a_i5 = wat.process(c2a_i4);
cout << "Wat complete" << endl;
SwiftImage<uint16> c2a_i6 = c2a_i2 && c2a_i5;
vector<SwiftImageObject<> > c2a_objs1 = segmenter.process(c2a_i6);
SwiftImage<uint16> c1t_i1("./Images/smallfake2/c1_t.tif");
cout << "Load complete" << endl;
SwiftImage<uint16> c1t_i2 = nwt.process(c1t_i1);
cout << "Thresholding complete" << endl;
SwiftImage<uint16> c1t_i3 = edm.process(c1t_i2);
cout << "EDM complete" << endl;
SwiftImage<uint16> c1t_i4 = inv.process(c1t_i3);
cout << "INV complete" << endl;
SwiftImage<uint16> c1t_i5 = wat.process(c1t_i4);
cout << "Wat complete" << endl;
SwiftImage<uint16> c1t_i6 = c1t_i2 && c1t_i5;
vector<SwiftImageObject<> > c1t_objs1 = segmenter.process(c1t_i6);
SwiftImage<uint16> c2t_i1("./Images/smallfake2/c2_t.tif");
cout << "Load complete" << endl;
SwiftImage<uint16> c2t_i2 = nwt.process(c2t_i1);
cout << "Thresholding complete" << endl;
SwiftImage<uint16> c2t_i3 = edm.process(c2t_i2);
cout << "EDM complete" << endl;
SwiftImage<uint16> c2t_i4 = inv.process(c2t_i3);
cout << "INV complete" << endl;
SwiftImage<uint16> c2t_i5 = wat.process(c2t_i4);
cout << "Wat complete" << endl;
SwiftImage<uint16> c2t_i6 = c2t_i2 && c2t_i5;
vector<SwiftImageObject<> > c2t_objs1 = segmenter.process(c2t_i6);
// Now have c1_objs1 and c2_objs1 for registration
vector<vector<SwiftImageObject<> > > a_cycles;
a_cycles.push_back(c1a_objs1);
a_cycles.push_back(c2a_objs1);
vector<vector<SwiftImageObject<> > > t_cycles;
t_cycles.push_back(c1t_objs1);
t_cycles.push_back(c2t_objs1);
ChannelRegistration<> chanreg(c2a_i6.image_width(),c2a_i6.image_height());
vector<vector<SwiftImageCluster<> > > a_clusters = chanreg.process_channel_registration(a_cycles,SwiftImageCluster<>::base_a);
vector<vector<SwiftImageCluster<> > > c_clusters = chanreg.process_channel_registration(t_cycles,SwiftImageCluster<>::base_c);
vector<vector<SwiftImageCluster<> > > g_clusters = chanreg.process_channel_registration(a_cycles,SwiftImageCluster<>::base_g);
vector<vector<SwiftImageCluster<> > > t_clusters = chanreg.process_channel_registration(t_cycles,SwiftImageCluster<>::base_t);
CrossChannelRegistration<> crosschanreg(c2a_i6.image_width(),c2a_i6.image_height(),true,3);
vector<vector<SwiftImageCluster<> > > all_clusters = crosschanreg.process_crosschannel_registration(a_clusters,
c_clusters,
g_clusters,
t_clusters);
for(int n=0;n<all_clusters.size();n++) {
ut.test(static_cast<int>(all_clusters[n].size()),2);
}
ut.test(static_cast<int>(all_clusters.size()),5);
// Cluster 1, Cycle 1
ut.test(static_cast<int>(all_clusters[0][0].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[0][0].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[0][0].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[0][0].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 1, Cycle 2
ut.test(static_cast<int>(all_clusters[0][1].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[0][1].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[0][1].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[0][1].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 2, Cycle 1
ut.test(static_cast<int>(all_clusters[1][0].features[SwiftImageCluster<>::base_a].size()),2);
ut.test(static_cast<int>(all_clusters[1][0].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[1][0].features[SwiftImageCluster<>::base_g].size()),2);
ut.test(static_cast<int>(all_clusters[1][0].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[0].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[1].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[0].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[1].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 2, Cycle 2
ut.test(static_cast<int>(all_clusters[1][1].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[1][1].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[1][1].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[1][1].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[0].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[1].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[0].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[1].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[0].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[1].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[0].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,6);
// Cluster 3, Cycle 1
ut.test(static_cast<int>(all_clusters[2][0].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[2][0].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[2][0].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[2][0].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,1);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,1);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,1);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,1);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 3, Cycle 2
ut.test(static_cast<int>(all_clusters[2][1].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[2][1].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[2][1].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[2][1].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,1);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,1);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,1);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,1);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 4, Cycle 1
ut.test(static_cast<int>(all_clusters[3][0].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[3][0].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[3][0].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[3][0].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,8);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,5);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,8);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,6);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,8);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,5);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,8);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,6);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,8);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,5);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,8);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,6);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,8);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,5);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,8);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,6);
ut.test(all_clusters[3][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 4, Cycle 2
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,8);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,5);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,8);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,6);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,8);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,5);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,8);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,6);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,8);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,5);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,8);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,6);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,8);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,5);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,8);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,6);
ut.test(all_clusters[3][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
all_clusters = crosschanreg.process_crosschannel_registration_inv(a_clusters,
c_clusters,
g_clusters,
t_clusters);
for(int n=0;n<all_clusters.size();n++) {
ut.test(static_cast<int>(all_clusters[n].size()),2);
}
ut.test(static_cast<int>(all_clusters.size()),5);
// Cluster 1, Cycle 1
ut.test(static_cast<int>(all_clusters[0][0].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[0][0].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[0][0].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[0][0].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 1, Cycle 2
ut.test(static_cast<int>(all_clusters[0][1].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[0][1].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[0][1].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[0][1].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[0][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 2, Cycle 1
ut.test(static_cast<int>(all_clusters[1][0].features[SwiftImageCluster<>::base_a].size()),2);
ut.test(static_cast<int>(all_clusters[1][0].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[1][0].features[SwiftImageCluster<>::base_g].size()),2);
ut.test(static_cast<int>(all_clusters[1][0].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[0].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[1].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_a][1].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[0].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[1].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_g][1].pixels[1].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,5);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 2, Cycle 2
ut.test(static_cast<int>(all_clusters[1][1].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[1][1].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[1][1].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[1][1].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[0].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_a][0].pixels[1].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[0].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_t][0].pixels[1].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[0].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_g][0].pixels[1].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,5);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[0].length,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,1);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,6);
ut.test(all_clusters[1][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,6);
// Cluster 3, Cycle 1
ut.test(static_cast<int>(all_clusters[4][0].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[4][0].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[4][0].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[4][0].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,5);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,1);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,5);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,5);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,1);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,5);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,5);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,1);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,5);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,5);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,1);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,5);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[4][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 3, Cycle 2
ut.test(static_cast<int>(all_clusters[4][1].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[4][1].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[4][1].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[4][1].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,5);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,1);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,5);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,5);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,1);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,5);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,5);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,1);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,5);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,5);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,1);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,5);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,2);
ut.test(all_clusters[4][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 4, Cycle 1
ut.test(static_cast<int>(all_clusters[2][0].features[SwiftImageCluster<>::base_a].size()),1);
ut.test(static_cast<int>(all_clusters[2][0].features[SwiftImageCluster<>::base_t].size()),1);
ut.test(static_cast<int>(all_clusters[2][0].features[SwiftImageCluster<>::base_g].size()),1);
ut.test(static_cast<int>(all_clusters[2][0].features[SwiftImageCluster<>::base_c].size()),1);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,8);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,8);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,6);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,8);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,8);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,6);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,8);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,8);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,6);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,8);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,5);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,8);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,6);
ut.test(all_clusters[2][0].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
// Cluster 4, Cycle 2
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.x,8);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[0].pos.y,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[0].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.x,8);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[1].pos.y,6);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_a][0].pixels[1].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.x,8);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[0].pos.y,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[0].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.x,8);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[1].pos.y,6);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_t][0].pixels[1].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.x,8);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[0].pos.y,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[0].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.x,8);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[1].pos.y,6);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_g][0].pixels[1].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.x,8);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[0].pos.y,5);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[0].length,2);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.x,8);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[1].pos.y,6);
ut.test(all_clusters[2][1].features[SwiftImageCluster<>::base_c][0].pixels[1].length,2);
ut.end_test_set();
}
