int operator_mutate_erc_init ( char *options, breedphase *bp )
{
int errors = 0;
mutate_erc_data *md;
int i, j;
double r;
char **argv;
int internalset = 0, externalset = 0;
md = (mutate_erc_data *)MALLOC ( sizeof ( mutate_erc_data ) );
/* fill in the breedphase record. */
bp->operatorID = OPERATOR_MUTATE_ERC; //HJJ
bp->data = (void *)md;
bp->operator_free = operator_mutate_erc_free;
bp->operator_start = operator_mutate_erc_start;
bp->operator_end = operator_mutate_erc_end;
bp->operator_operate = operator_mutate_erc;
/* default values for the mutation-specific data structure. */
md->var_percent = 0.2;
md->erc_percent = 0.2;
md->tree = (double *)MALLOC ( tree_count * sizeof ( double ) );
for ( j = 0; j < tree_count; ++j )
md->tree[j] = 0.0;
md->treetotal = 0.0;
md->sname = NULL;
j = parse_o_rama ( options, &argv );
for ( i = 0; i < j; ++i )
{
if ( strcmp ( "select", argv[i] ) == 0 )
{
if ( !exists_select_method ( argv[++i] ) )
{
++errors;
error ( E_ERROR, "mutation erc: \"%s\" is not a known selection method.",
argv[i] );
}
FREE ( md->sname );
md->sname = (char *)MALLOC ( (strlen(argv[i])+1) * sizeof ( char ) );
strcpy ( md->sname, argv[i] );
}
else if ( strcmp ( "varpercent", argv[i] ) == 0 )
{
md->var_percent = strtod ( argv[++i], NULL );
if ( md->var_percent < 0.0 )
{
++errors;
error ( E_ERROR, "mutation_erc: \"var_percent\" must be nonnegative." );
}
}
else if ( strcmp ( "ercpercent", argv[i] ) == 0 )
{
md->erc_percent = strtod ( argv[++i], NULL );
if ( md->erc_percent < 0.0 )
{
++errors;
error ( E_ERROR, "mutation erc: \"erc_percent\" must be nonnegative." );
}
}
else
{
++errors;
error ( E_ERROR, "mutation erc: unknown option \"%s\".",
argv[i] );
}
}
free_o_rama ( j, &argv );
if ( md->sname == NULL )
{
++errors;
error ( E_ERROR, "mutation erc: no selection method specified." );
}
for ( j = 0; j < tree_count; ++j )
md->treetotal += md->tree[j];
if ( md->treetotal == 0.0 )
{
for ( j = 0; j < tree_count; ++j )
md->tree[j] = 1.0;
md->treetotal = tree_count;
}
r = 0.0;
for ( j = 0; j < tree_count; ++j )
r = (md->tree[j] += r);
return errors;
}
int operator_crossover_init ( char *options, breedphase *bp )
{
int errors = 0;
crossover_data *cd;
int i, j, k, m;
double r;
char **argv, **targv;
int internalset = 0, externalset = 0;
char *cp;
cd = (crossover_data *)MALLOC ( sizeof ( crossover_data ) );
/* place values into the breedphase table record. */
bp->operator = OPERATOR_CROSSOVER;
bp->data = (void *)cd;
bp->operator_free = operator_crossover_free;
bp->operator_start = operator_crossover_start;
bp->operator_end = operator_crossover_end;
bp->operator_operate = operator_crossover;
/* default values for all the crossover options. */
cd->keep_trying = 0;
cd->internal = 0.9;
cd->external = 0.1;
cd->tree = (double *)MALLOC ( tree_count * sizeof ( double ) );
cd->treecumul = (double *)MALLOC ( tree_count * sizeof ( double ) );
for ( j = 0; j < tree_count; ++j )
cd->tree[j] = 0.0;
cd->treetotal = 0.0;
cd->func = (double *)MALLOC ( fset_count * sizeof ( double ) );
cd->sname = NULL;
cd->sname2 = NULL;
/* break the options string into an argv-style array of strings. */
j = parse_o_rama ( options, &argv );
for ( i = 0; i < j; ++i )
{
/* parse "keep_trying" option. */
if ( strcmp ( "keep_trying", argv[i] ) == 0 )
{
/* translate a string into a binary value. returns -1 if
the string is not one of the valid strings meaning
yes or no. */
cd->keep_trying = translate_binary ( argv[++i] );
if ( cd->keep_trying == -1 )
{
++errors;
error ( E_ERROR, "crossover: \"%s\" is not a valid setting for \"keep_trying\".",
argv[i] );
}
}
/* parse "internal" option. */
else if ( strcmp ( "internal", argv[i] ) == 0 )
{
internalset = 1;
cd->internal = strtod ( argv[++i], NULL );
if ( cd->internal < 0.0 )
{
++errors;
error ( E_ERROR, "crossover: \"internal\" must be nonnegative." );
}
}
/* parse "external" option. */
else if ( strcmp ( "external", argv[i] ) == 0 )
{
externalset = 1;
cd->external = strtod ( argv[++i], NULL );
if ( cd->external < 0.0 )
{
++errors;
error ( E_ERROR, "crossover: \"external\" must be nonnegative." );
}
}
/* parse "select" option. */
else if ( strcmp ( "select", argv[i] ) == 0 )
{
if ( !exists_select_method ( argv[++i] ) )
{
++errors;
error ( E_ERROR, "crossover: \"%s\" is not a known selection method.",
argv[i] );
}
FREE ( cd->sname );
cd->sname = (char *)MALLOC ( (strlen(argv[i])+1) * sizeof ( char ) );
strcpy ( cd->sname, argv[i] );
if ( cd->sname2 == NULL )
cd->sname2 = cd->sname;
}
/* parse "select2" option. */
else if ( strcmp ( "select2", argv[i] ) == 0 )
{
if ( !exists_select_method ( argv[++i] ) )
{
++errors;
error ( E_ERROR, "crossover: \"%s\" is not a known selection method.",
argv[i] );
}
if ( cd->sname2 && cd->sname != cd->sname2 )
FREE ( cd->sname2 );
cd->sname2 = (char *)MALLOC ( (strlen(argv[i])+1) * sizeof ( char ) );
strcpy ( cd->sname2, argv[i] );
}
/* parse "tree" option. */
else if ( strcmp ( "tree", argv[i] ) == 0 )
{
k = parse_o_rama ( argv[++i], &targv );
if ( k != tree_count )
{
++errors;
error ( E_ERROR, "crossover: wrong number of tree fields: \"%s\".",
argv[i] );
}
else
{
for ( m = 0; m < k; ++m )
{
cd->tree[m] = strtod ( targv[m], &cp );
if ( *cp )
{
++errors;
error ( E_ERROR, "crossover: \"%s\" is not a number.",
targv[m] );
}
}
}
free_o_rama ( k, &targv );
}
/* parse "tree#" option. */
else if ( strncmp ( "tree", argv[i], 4 ) == 0 )
{
k = strtol ( argv[i]+4, &cp, 10 );
if ( *cp )
{
++errors;
error ( E_ERROR, "crossover: unknown option \"%s\".",
argv[i] );
}
if ( k < 0 || k >= tree_count )
{
++errors;
error ( E_ERROR, "crossover: \"%s\" is out of range.",
argv[i] );
}
else
{
cd->tree[k] = strtod ( argv[++i], &cp );
if ( *cp )
{
++errors;
error ( E_ERROR, "crossover: \"%s\" is not a number.",
argv[i] );
}
}
}
else
{
++errors;
error ( E_ERROR, "crossover: unknown option \"%s\".",
argv[i] );
}
}
free_o_rama ( j, &argv );
if ( internalset && !externalset )
cd->external = 0.0;
else if ( !internalset && externalset )
cd->internal = 0.0;
if ( cd->sname == NULL )
{
++errors;
error ( E_ERROR, "crossover: no selection method specified." );
}
/** compute "func" array from the "tree" array. **/
for ( j = 0; j < tree_count; ++j )
cd->treetotal += cd->tree[j];
if ( cd->treetotal == 0.0 )
{
for ( j = 0; j < tree_count; ++j )
cd->tree[j] = 1.0;
cd->treetotal = tree_count;
}
for ( j = 0; j < fset_count; ++j )
cd->func[j] = 0.0;
for ( j = 0; j < tree_count; ++j )
cd->func[tree_map[j].fset] += cd->tree[j];
r = 0.0;
for ( j = 0; j < fset_count; ++j )
r = (cd->func[j] += r);
#ifdef DEBUG
if ( !errors )
{
printf ( "crossover options:\n" );
printf ( " internal: %lf external: %lf\n", cd->internal, cd->external );
printf ( " keep_trying: %d\n", cd->keep_trying );
printf ( " primary selection: %s\n", cd->sname==NULL?"NULL":cd->sname );
printf ( " second selection: %s\n", cd->sname2==NULL?"NULL":(cd->sname2==cd->sname?"same as primary":cd->sname2) );
printf ( " tree total: %lf\n", cd->treetotal );
for ( j = 0; j < tree_count; ++j )
printf ( " tree %d: %lf\n", j, cd->tree[j] );
for ( j = 0; j < fset_count; ++j )
printf ( " fset %d: %lf\n", j, cd->func[j] );
}
#endif
return errors;
}