ImpHuffmanWaveletTree(stream_type & in)
:
// number of symbols
n(::libmaus2::util::NumberSerialisation::deserialiseNumber(in)),
// root of huffman tree
sroot ( ::libmaus2::huffman::HuffmanTreeNode::deserialize(in) ),
// number of contexts = number of bit vectors
dicts( ::libmaus2::util::NumberSerialisation::deserialiseNumber(in) ),
// root of dictionary tree
root(0),
//
enctable(sroot.get()),
//
maxdepth(0)
{
// std::cerr << "** n=" << n << std::endl;
for ( uint64_t i = 0; i < dicts.size(); ++i )
{
rank_ptr_type tdictsi(new rank_type(in));
dicts [ i ] = UNIQUE_PTR_MOVE(tdictsi);
dicts [ i ] -> checkSanity();
}
nodepos = ::libmaus2::util::NumberSerialisation::deserialiseNumberVector<uint64_t>(in);
::libmaus2::util::NumberSerialisation::deserialiseNumber(in); // index position
init();
}
ImpHuffmanWaveletTree(stream_type & in, uint64_t & s)
:
// number of symbols
n(::libmaus2::util::NumberSerialisation::deserialiseNumber(in)),
// root of huffman tree
sroot ( ::libmaus2::huffman::HuffmanTreeNode::deserialize(in,s) ),
// number of contexts = number of bit vectors
dicts( ::libmaus2::util::NumberSerialisation::deserialiseNumber(in) ),
// root of dictionary tree
root(0),
//
enctable(sroot.get()),
//
maxdepth(0)
{
s += 2*sizeof(uint64_t);
for ( uint64_t i = 0; i < dicts.size(); ++i )
{
rank_ptr_type tdictsi(new rank_type(in,s));
dicts [ i ] = UNIQUE_PTR_MOVE(tdictsi);
}
nodepos = ::libmaus2::util::NumberSerialisation::deserialiseNumberVector<uint64_t>(in);
::libmaus2::util::NumberSerialisation::deserialiseNumber(in); // index position
s += (1+nodepos.size()+1)*sizeof(uint64_t);
init();
}
ImpCompactHuffmanWaveletTreeTemplate(stream_type & in)
:
// number of symbols
n(::libmaus2::util::NumberSerialisation::deserialiseNumber(in)),
// huffman tree
H(new libmaus2::huffman::HuffmanTree(in)),
E(new libmaus2::huffman::HuffmanTree::EncodeTable(*H)),
// number of contexts = number of bit vectors
dicts( ::libmaus2::util::NumberSerialisation::deserialiseNumber(in) ),
//
maxdepth(0)
{
// std::cerr << "** n=" << n << std::endl;
for ( uint64_t i = 0; i < dicts.size(); ++i )
{
rank_ptr_type tdictsi(new rank_type(in));
dicts [ i ] = UNIQUE_PTR_MOVE(tdictsi);
// dicts [ i ] -> checkSanity();
}
nodepos = ::libmaus2::util::NumberSerialisation::deserialiseNumberVector<uint64_t>(in);
::libmaus2::util::NumberSerialisation::deserialiseNumber(in); // index position
init();
}