void printGenomicSeqLink(struct sqlConnection *conn, char *geneId,
char *chrom, int start, int end)
/* Figure out known genes table, position of gene, link it. */
{
char *table = genomeSetting("knownGene");
webPrintWideCellStart(3, HG_COL_TABLE);
printGenomicAnchor(table, geneId, chrom, start, end);
hPrintf("Genomic Sequence (%s:", chrom);
printLongWithCommas(stdout, start+1);
hPrintf("-");
printLongWithCommas(stdout, end);
hPrintf(")</A>");
webPrintLinkCellEnd();
}
static void printSeqLink(struct sqlConnection *conn, char *geneId,
char *tableId, char *command, char *label, int colCount)
/* Print out link to mRNA or protein. */
{
char *table = genomeSetting(tableId);
boolean gotHyperlink = FALSE;
webPrintWideCellStart(colCount, HG_COL_TABLE);
if (sqlTableExists(conn, table))
{
char query[512];
safef(query, sizeof(query), "select count(*) from %s where name = '%s'",
table, geneId);
if (sqlExists(conn, query))
{
hPrintf("<A HREF=\"../cgi-bin/hgGene?%s&%s=1&hgg_gene=%s\" class=\"toc\">",
cartSidUrlString(cart), command, geneId);
hPrintf("%s</A>", label);
gotHyperlink = TRUE;
}
}
if (!gotHyperlink)
hPrintf("%s", label);
webPrintLinkCellEnd();
}
void webPrintLinkCellStart()
/* Print link cell start in our colors. */
{
webPrintWideCellStart(1, HG_COL_TABLE);
}
