Esempi in C++ (Cpp) per CSeq_entry_Handle::GetParentEntry

Esempio n. 1

File: bioseq_handle.cpp Progetto: swuecho/igblast

CSeq_entry_Handle
CBioseq_Handle::GetComplexityLevel(CBioseq_set::EClass cls) const
{
    const CBioseq_set_Handle::TComplexityTable& ctab =
        CBioseq_set_Handle::sx_GetComplexityTable();
    if (cls == CBioseq_set::eClass_other) {
        // adjust 255 to the correct value
        cls = CBioseq_set::EClass(sizeof(ctab) - 1);
    }
    CSeq_entry_Handle last = GetParentEntry();
    _ASSERT(last && last.IsSeq());
    CSeq_entry_Handle e = last.GetParentEntry();
    while ( e ) {
        _ASSERT(e.IsSet());
        // Found good level
        if ( last.IsSet()  &&
             ctab[last.GetSet().GetClass()] == ctab[cls] )
            break;
        // Gone too high
        if ( ctab[e.GetSet().GetClass()] > ctab[cls] ) {
            break;
        }
        // Go up one level
        last = e;
        e = e.GetParentEntry();
    }
    return last;
}