double bilinear_height(DataAccessor pSrcAcc, double I, double J)
{
double z1=0,z2=0,z3=0,z4=0;
pSrcAcc->toPixel(int(J),int(I));
VERIFY(pSrcAcc.isValid());
z1 = pSrcAcc->getColumnAsDouble();
pSrcAcc->toPixel(int(J)+1,int(I));
VERIFY(pSrcAcc.isValid());
z2 = pSrcAcc->getColumnAsDouble();
pSrcAcc->toPixel(int(J),int(I)+1);
VERIFY(pSrcAcc.isValid());
z3 = pSrcAcc->getColumnAsDouble();
pSrcAcc->toPixel(int(J)+1,int(I)+1);
VERIFY(pSrcAcc.isValid());
z4 = pSrcAcc->getColumnAsDouble();
double a=0,b=0,c=0,d=0;
d = z1;
a = (z2-z1);
b = (z3-z1);
c = (z4+z1-z2-z3);
double H = a*(J-int(J))+b*(I-int(I))+c*(I-int(I))*(J-int(J))+d;
return H;
}
bool Deconvolution::execute(PlugInArgList* pInArgList, PlugInArgList* pOutArgList)
{
StepResource pStep("Deconvolution Sharpening", "app", "619F3C8A-FB70-44E0-B211-B116E604EDDA");
if (pInArgList == NULL || pOutArgList == NULL)
{
return false;
}
Progress* pProgress = pInArgList->getPlugInArgValue<Progress>(Executable::ProgressArg());
RasterElement* pCube = pInArgList->getPlugInArgValue<RasterElement>(Executable::DataElementArg());
if (pCube == NULL)
{
std::string msg = "A raster cube must be specified.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
RasterDataDescriptor* pDesc = static_cast<RasterDataDescriptor*>(pCube->getDataDescriptor());
VERIFY(pDesc != NULL);
EncodingType ResultType = pDesc->getDataType();
if (pDesc->getDataType() == INT4SCOMPLEX)
{
ResultType = INT4SBYTES;
}
else if (pDesc->getDataType() == FLT8COMPLEX)
{
ResultType = FLT8BYTES;
}
FactoryResource<DataRequest> pRequest;
pRequest->setInterleaveFormat(BSQ);
DataAccessor pSrcAcc = pCube->getDataAccessor(pRequest.release());
ModelResource<RasterElement> pResultCube(RasterUtilities::createRasterElement(pCube->getName() +
"_Deconvolution_Sharpening_Result", pDesc->getRowCount(), pDesc->getColumnCount(), ResultType));
if (pResultCube.get() == NULL)
{
std::string msg = "A raster cube could not be created.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
FactoryResource<DataRequest> pResultRequest;
pResultRequest->setWritable(true);
DataAccessor pDestAcc = pResultCube->getDataAccessor(pResultRequest.release());
Service<DesktopServices> pDesktop;
DeconvolutionDlg dlg(pDesktop->getMainWidget());
int stat = dlg.exec();
if (stat != QDialog::Accepted)
{
return true;
}
double minGrayValue;
double maxGrayValue;
double deltaValue = 0.0;
int nFilterType = dlg.getCurrentFilterType();
int windowSize = dlg.getCurrentWindowSize();
double sigmaVal = dlg.getSigmaValue();
double gamaVal = dlg.getGamaValue();
windowSize = (windowSize-1)/2;
if (NULL != pOriginalImage)
{
free(pOriginalImage);
}
pOriginalImage = (double *)malloc(sizeof(double)*pDesc->getRowCount()*pDesc->getColumnCount());
double *OrigData = (double *)malloc(sizeof(double)*pDesc->getRowCount()*pDesc->getColumnCount());
double *NewData = (double *)malloc(sizeof(double)*pDesc->getRowCount()*pDesc->getColumnCount());
double *ConvoData = (double *)malloc(sizeof(double)*pDesc->getRowCount()*pDesc->getColumnCount());
double *pTempData;
InitializeData(pSrcAcc, pOriginalImage, OrigData, pDesc->getRowCount(), pDesc->getColumnCount(), pDesc->getDataType());
GetGrayScale(&minGrayValue, &maxGrayValue, pDesc->getDataType());
//Perform deconvolution iteratively
for (int num = 0; num < MAX_ITERATION_NUMBER; num++)
{
if (pProgress != NULL)
{
pProgress->updateProgress("Deconvolution process", num*100/MAX_ITERATION_NUMBER, NORMAL);
}
if (isAborted())
{
std::string msg = getName() + " has been aborted.";
pStep->finalize(Message::Abort, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ABORT);
}
free(OrigData);
free(NewData);
free(ConvoData);
return false;
}
deltaValue = DeconvolutionFunc(OrigData, pOriginalImage, NewData, ConvoData, sigmaVal, gamaVal,
windowSize, pDesc->getRowCount(), pDesc->getColumnCount(), nFilterType, maxGrayValue, minGrayValue);
pTempData = OrigData;
OrigData = NewData;
NewData = pTempData;
double errorRate = deltaValue/(maxGrayValue-minGrayValue);
if (errorRate < CONVERGENCE_THRESHOLD)
{
break;
}
}
free(NewData);
free(ConvoData);
//Output result
unsigned int nCount = 0;
for (int i = 0; i < pDesc->getRowCount(); i++)
{
for (int j = 0; j < pDesc->getColumnCount(); j++)
{
if (!pDestAcc.isValid())
{
std::string msg = "Unable to access the cube data.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
free(OrigData);
return false;
}
pDestAcc->toPixel(i, j);
switchOnEncoding(ResultType, restoreImageValue, pDestAcc->getColumn(), (OrigData+nCount));
nCount++;
}
}
free(OrigData);
if (!isBatch())
{
Service<DesktopServices> pDesktop;
SpatialDataWindow* pWindow = static_cast<SpatialDataWindow*>(pDesktop->createWindow(pResultCube->getName(),
SPATIAL_DATA_WINDOW));
SpatialDataView* pView = (pWindow == NULL) ? NULL : pWindow->getSpatialDataView();
if (pView == NULL)
{
std::string msg = "Unable to create view.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
pView->setPrimaryRasterElement(pResultCube.get());
pView->createLayer(RASTER, pResultCube.get());
}
if (pProgress != NULL)
{
pProgress->updateProgress("Deconvolution enhancement is complete.", 100, NORMAL);
}
pOutArgList->setPlugInArgValue("Deconvolution enhancement Result", pResultCube.release());
pStep->finalize();
return true;
}
void ConvolutionFilterShell::ConvolutionFilterThread::convolve(const T*)
{
int numResultsCols = mInput.mpIterCheck->getNumSelectedColumns();
if (mInput.mpResult == NULL)
{
return;
}
const RasterDataDescriptor* pResultDescriptor = static_cast<const RasterDataDescriptor*>(
mInput.mpResult->getDataDescriptor());
// account for AOIs which extend outside the dataset
int maxRowNum = static_cast<int>(mInput.mpDescriptor->getRowCount()) - 1;
mRowRange.mFirst = std::max(0, mRowRange.mFirst);
mRowRange.mLast = std::min(mRowRange.mLast, maxRowNum);
unsigned int bandCount = mInput.mBands.size();
for (unsigned int bandNum = 0; bandNum < bandCount; ++bandNum)
{
FactoryResource<DataRequest> pResultRequest;
pResultRequest->setRows(pResultDescriptor->getActiveRow(mRowRange.mFirst),
pResultDescriptor->getActiveRow(mRowRange.mLast));
pResultRequest->setColumns(pResultDescriptor->getActiveColumn(0),
pResultDescriptor->getActiveColumn(numResultsCols - 1));
pResultRequest->setBands(pResultDescriptor->getActiveBand(bandNum),
pResultDescriptor->getActiveBand(bandNum));
pResultRequest->setWritable(true);
DataAccessor resultAccessor = mInput.mpResult->getDataAccessor(pResultRequest.release());
if (!resultAccessor.isValid())
{
return;
}
int oldPercentDone = -1;
int rowOffset = static_cast<int>(mInput.mpIterCheck->getOffset().mY);
int startRow = mRowRange.mFirst + rowOffset;
int stopRow = mRowRange.mLast + rowOffset;
int columnOffset = static_cast<int>(mInput.mpIterCheck->getOffset().mX);
int startColumn = columnOffset;
int stopColumn = numResultsCols + columnOffset - 1;
int yshift = (mInput.mKernel.Nrows() - 1) / 2;
int xshift = (mInput.mKernel.Ncols() - 1) / 2;
FactoryResource<DataRequest> pRequest;
pRequest->setRows(mInput.mpDescriptor->getActiveRow(std::max(0, startRow - yshift)),
mInput.mpDescriptor->getActiveRow(std::min(maxRowNum, stopRow + mInput.mKernel.Nrows() - yshift)));
pRequest->setColumns(mInput.mpDescriptor->getActiveColumn(startColumn),
mInput.mpDescriptor->getActiveColumn(stopColumn));
pRequest->setBands(mInput.mpDescriptor->getActiveBand(mInput.mBands[bandNum]),
mInput.mpDescriptor->getActiveBand(mInput.mBands[bandNum]));
DataAccessor accessor = mInput.mpRaster->getDataAccessor(pRequest.release());
if (!accessor.isValid())
{
return;
}
Service<ModelServices> model;
ModelServices* pModel = model.get();
int numRows = stopRow - startRow + 1;
for (int row_index = startRow; row_index <= stopRow; ++row_index)
{
int percentDone = 100 * ((bandNum * numRows) + (row_index - startRow)) / (numRows * bandCount);
if (percentDone > oldPercentDone)
{
oldPercentDone = percentDone;
getReporter().reportProgress(getThreadIndex(), percentDone);
}
if (mInput.mpAbortFlag != NULL && *mInput.mpAbortFlag)
{
break;
}
for (int col_index = startColumn; col_index <= stopColumn; ++col_index)
{
double accum = 0.0;
if (mInput.mpIterCheck->getPixel(col_index, row_index))
{
for (int kernelrow = 0; kernelrow < mInput.mKernel.Nrows(); kernelrow++)
{
int neighbor_row = row_index - yshift + kernelrow;
int real_row = std::min(std::max(0, neighbor_row),
static_cast<int>(mInput.mpDescriptor->getRowCount()) - 1);
for (int kernelcol = 0; kernelcol < mInput.mKernel.Ncols(); kernelcol++)
{
int neighbor_col = col_index - xshift + kernelcol;
int real_col = std::min(std::max(0, neighbor_col),
static_cast<int>(mInput.mpDescriptor->getColumnCount()) - 1);
accessor->toPixel(real_row, real_col);
if (accessor.isValid() == false)
{
return;
}
double val = 0.0;
pModel->getDataValue<T>(reinterpret_cast<T*>(accessor->getColumn()), COMPLEX_MAGNITUDE, 0, val);
accum += mInput.mKernel(kernelrow+1, kernelcol+1) * val / mInput.mKernel.Storage();
}
}
}
if (resultAccessor.isValid() == false)
{
return;
}
switchOnEncoding(pResultDescriptor->getDataType(), assignResult,
resultAccessor->getColumn(), accum + mInput.mOffset);
resultAccessor->nextColumn();
}
resultAccessor->nextRow();
}
}
}
double edgeDetection7(DataAccessor pSrcAcc, int row, int col, int rowSize, int colSize)
{
int prevCol = std::max(col - 1, 0);
int prevRow = std::max(row - 1, 0);
int nextCol = std::min(col + 1, colSize - 1);
int nextRow = std::min(row + 1, rowSize - 1);
int prevCol1 = std::max(col-2,0);
int prevRow1= std::max(row-2,0);
int nextCol1= std::min(col+2,colSize-1);
int nextRow1= std::min(row+2,rowSize-1);
pSrcAcc->toPixel(prevRow1, prevCol1);
int row1col1 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow1, prevCol);
int row1col2 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow1, col);
int row1col3 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow1, nextCol);
int row1col4 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow1, nextCol1);
int row1col5 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow, prevCol1);
int row2col1 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow, prevCol);
int row2col2 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow, col);
int row2col3 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow, nextCol);
int row2col4 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(prevRow, nextCol1);
int row2col5 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(row, prevCol1);
int row3col1 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(row, prevCol);
int row3col2 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(row, col);
int row3col3 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(row, nextCol);
int row3col4 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(row, nextCol1);
int row3col5 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow, prevCol1);
int row4col1 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow, prevCol);
int row4col2 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow, col);
int row4col3 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow, nextCol);
int row4col4 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow, nextCol1);
int row4col5 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow1, prevCol1);
int row5col1 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow1, prevCol);
int row5col2 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow1, col);
int row5col3 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow1, nextCol);
int row5col4 = pSrcAcc->getColumnAsInteger();
pSrcAcc->toPixel(nextRow1, nextCol1);
int row5col5 = pSrcAcc->getColumnAsInteger();
int g = row1col1 + row1col2 + row1col3 + row1col4 + row1col5 + row2col1 + row2col2 + row2col3 + row2col4
+ row2col5 + row3col1 + row3col2 + 24*row3col3 + row3col4 + row3col5 + row4col1 + row4col2 + row4col3
+ row4col4 + row4col5 + row5col1 + row5col2 + row5col3 + row5col4 + row5col5;
double value = g/159.0;
return value;
};
bool Orthorectification::process(int type, RasterElement *pDSM, GRID DSMGrid, double Geoid_Offset, int DSM_resampling)
{
StepResource pStep("Orthorectification Process", "app", "B4D426EC-E06D-11E1-83C8-42E56088709B");
pStep->addStep("Start","app", "B4D426EC-E06D-11E1-83C8-42E56088709B");
boxsize=0;
res_type = type;
if (res_type == 0)
{
boxsize=0;
}
else if (res_type == 1)
{
boxsize=1;
}
else if (res_type == 2)
{
boxsize=2;
}
else if (res_type == 3)
{
boxsize=3;
}
ProgressResource pResource("ProgressBar");
Progress *pProgress=pResource.get();
pProgress->setSettingAutoClose(false);
RasterDataDescriptor* pDesc = static_cast<RasterDataDescriptor*>(Image->getDataDescriptor());
FactoryResource<DataRequest> pRequest;
DataAccessor pSrcAcc = Image->getDataAccessor(pRequest.release());
RasterDataDescriptor* pDescDSM = static_cast<RasterDataDescriptor*>(pDSM->getDataDescriptor());
FactoryResource<DataRequest> pRequestDSM;
DataAccessor pDSMAcc = pDSM->getDataAccessor(pRequestDSM.release());
unsigned int N_Row = int(OrthoGrid.Y_Dim)+1;
unsigned int N_Col = int(OrthoGrid.X_Dim)+1;
// Check name of raster element //
Service<ModelServices> pModel;
vector<string> mCubeNames = pModel->getElementNames("RasterElement");
int NameIndex = 0, control=0;
stringstream out;
string OutputName=Image->getName();
string OutputName1 = OutputName.substr(0,OutputName.find_last_of("."));
while (control == 0)
{
control = 1;
OutputName = OutputName1+"_ortho_";
out << NameIndex;
OutputName.append(out.str()+".tiff");
for (unsigned int k=0; k<mCubeNames.size(); k++)
{
if (OutputName.compare(mCubeNames[k]) == 0) control = 0;
}
NameIndex++;
out.str("");
out.clear();
}
// Create output raster element and assoiciated descriptor and accessor //
ModelResource<RasterElement> pResultCube(RasterUtilities::createRasterElement(OutputName,N_Row ,N_Col, FLT4BYTES));
RasterDataDescriptor* pResultDesc = static_cast<RasterDataDescriptor*> (pResultCube->getDataDescriptor());
FactoryResource<DataRequest> pResultRequest;
pResultRequest->setWritable(true);
DataAccessor pDestAcc = pResultCube->getDataAccessor(pResultRequest.release());
double NodeLat, NodeLon, H_IJ=0;
//int DSM_I, DSM_J;
for (unsigned int row = 0; row < N_Row; ++row)
{
if (pProgress != NULL)
{
pProgress->updateProgress("Calculating result", row * 100 / N_Row, NORMAL);
}
if (!pDestAcc.isValid())
{
std::string msg = "Unable to access the cube data.";
pProgress->updateProgress(msg, 0, ERRORS);
pStep->finalize(Message::Failure, msg);
return false;
}
for (unsigned int col = 0; col < N_Col; ++col)
{
NodeLat = OrthoGrid.Lat_Min+row*OrthoGrid.Lat_Step;
NodeLon = OrthoGrid.Lon_Min+col*OrthoGrid.Lon_Step;
// RETRIEVE HEIGHT VALUE FROM DSM
if (DSM_resampling == 0)
{
int DSM_I = int((NodeLon - DSMGrid.Lon_Min)/DSMGrid.Lon_Step);
int DSM_J = pDescDSM->getRowCount() - int((NodeLat - DSMGrid.Lat_Min)/DSMGrid.Lat_Step);
pDSMAcc->toPixel(DSM_J,DSM_I);
VERIFY(pDSMAcc.isValid());
H_IJ = (pDSMAcc->getColumnAsDouble());
}
else
{
double DSM_I = ((NodeLon - DSMGrid.Lon_Min)/DSMGrid.Lon_Step);
double DSM_J = pDescDSM->getRowCount() - ((NodeLat - DSMGrid.Lat_Min)/DSMGrid.Lat_Step);
H_IJ = bilinear_height(pDSMAcc,DSM_I,DSM_J);
}
P_COORD NodeImage = Model->SAR_GroundToImage(NodeLon,NodeLat,H_IJ+Geoid_Offset);
if ((NodeImage.I>1 && NodeImage.I< Model->Metadata.Width-1) && (NodeImage.J>1 && NodeImage.J< Model->Metadata.Height-1))
{
switchOnEncoding(pResultDesc->getDataType(), copypixel3, pDestAcc->getColumn(), pSrcAcc, int(NodeImage.I), int(NodeImage.J),boxsize, H_IJ);
}
pDestAcc->nextColumn();
}
pDestAcc->nextRow();
}
Service<DesktopServices> pDesktop;
Service<ModelServices> pMod;
GcpList* GcpL = static_cast<GcpList*>(pMod->createElement("corner coordinate","GcpList",pResultCube.get()));
// Update GCPs Information: to account for Opticks reading gcp lat&lon values the opposite way around,
// here it is necessary to switch the value to assign lat to gcp.mCoordinate.mX and lon to gcp.mCoordinate.mY
GcpPoint Punto;
Punto.mCoordinate.mX = OrthoGrid.Lat_Min;
Punto.mCoordinate.mY = OrthoGrid.Lon_Min;
Punto.mCoordinate.mZ = 0.0;
Punto.mPixel.mX = 0.0;
Punto.mPixel.mY = 0.0;
GcpL->addPoint(Punto);
Punto.mCoordinate.mX = OrthoGrid.Lat_Max;
Punto.mCoordinate.mY = OrthoGrid.Lon_Min;
Punto.mCoordinate.mZ = 0.0;
Punto.mPixel.mX = 0.0;
Punto.mPixel.mY = OrthoGrid.Y_Dim;
GcpL->addPoint(Punto);
Punto.mCoordinate.mX = OrthoGrid.Lat_Min;
Punto.mCoordinate.mY = OrthoGrid.Lon_Max;
Punto.mCoordinate.mZ = 0.0;
Punto.mPixel.mX = OrthoGrid.X_Dim;
Punto.mPixel.mY = 0.0;
GcpL->addPoint(Punto);
Punto.mCoordinate.mX = OrthoGrid.Lat_Max;
Punto.mCoordinate.mY = OrthoGrid.Lon_Max;
Punto.mCoordinate.mZ = 0.0;
Punto.mPixel.mX = OrthoGrid.X_Dim;
Punto.mPixel.mY = OrthoGrid.Y_Dim;
GcpL->addPoint(Punto);
SpatialDataWindow* pWindow = static_cast<SpatialDataWindow*>(pDesktop->createWindow(pResultCube->getName(),
SPATIAL_DATA_WINDOW));
SpatialDataView* pView = (pWindow == NULL) ? NULL : pWindow->getSpatialDataView();
pView->setPrimaryRasterElement(pResultCube.get());
pView->createLayer(RASTER, pResultCube.get());
pView->createLayer(GCP_LAYER,GcpL,"GCP");
pView->setDataOrigin(LOWER_LEFT);
pResultCube.release();
pProgress->updateProgress("Orthorectification is complete.", 100, NORMAL);
pStep->addStep("End","app", "B4D426EC-E06D-11E1-83C8-42E56088709B");
pStep->finalize();
return true;
}
bool TextureSegmentation::execute(PlugInArgList* pInArgList, PlugInArgList* pOutArgList)
{
StepResource pStep("SAR image segmentation", "app", "CC430C1A-9D8C-4bb5-9254-FCF7EECAFA3C");
if (pInArgList == NULL || pOutArgList == NULL)
{
return false;
}
Progress* pProgress = pInArgList->getPlugInArgValue<Progress>(Executable::ProgressArg());
RasterElement* pCube = pInArgList->getPlugInArgValue<RasterElement>(Executable::DataElementArg());
if (pCube == NULL)
{
std::string msg = "A raster cube must be specified.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
RasterDataDescriptor* pDesc = static_cast<RasterDataDescriptor*>(pCube->getDataDescriptor());
VERIFY(pDesc != NULL);
EncodingType ResultType = INT1UBYTE;
FactoryResource<DataRequest> pRequest;
pRequest->setInterleaveFormat(BSQ);
DataAccessor pSrcAcc = pCube->getDataAccessor(pRequest.release());
ModelResource<RasterElement> pResultCube(RasterUtilities::createRasterElement(pCube->getName() +
"_Segmentation_Result", pDesc->getRowCount(), pDesc->getColumnCount(), ResultType));
if (pResultCube.get() == NULL)
{
std::string msg = "A raster cube could not be created.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
FactoryResource<DataRequest> pResultRequest;
pResultRequest->setWritable(true);
DataAccessor pDestAcc = pResultCube->getDataAccessor(pResultRequest.release());
if (isAborted())
{
std::string msg = getName() + " has been aborted.";
pStep->finalize(Message::Abort, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ABORT);
}
return false;
}
if (NULL != pBuffer)
{
free(pBuffer);
}
pBuffer = (float *)malloc(sizeof(float)*pDesc->getRowCount()*pDesc->getColumnCount());
MakeSegmentation(pSrcAcc, pBuffer, pBuffer, pDesc->getRowCount(), pDesc->getColumnCount(), pDesc->getDataType());
//Output the value
unsigned int nCount = 0;
for (unsigned int j = 0; j < pDesc->getColumnCount(); j++)
{
for (unsigned int i = 0; i < pDesc->getRowCount(); i++)
{
if (!pDestAcc.isValid())
{
std::string msg = "Unable to access the cube data.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
pDestAcc->toPixel(i, j);
switchOnEncoding(ResultType, restoreSegmentationValue, pDestAcc->getColumn(), (pBuffer+nCount));
nCount++;
}
}
if (!isBatch())
{
Service<DesktopServices> pDesktop;
SpatialDataWindow* pWindow = static_cast<SpatialDataWindow*>(pDesktop->createWindow(pResultCube->getName(),
SPATIAL_DATA_WINDOW));
SpatialDataView* pView = (pWindow == NULL) ? NULL : pWindow->getSpatialDataView();
if (pView == NULL)
{
std::string msg = "Unable to create view.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
pView->setPrimaryRasterElement(pResultCube.get());
pView->createLayer(RASTER, pResultCube.get());
}
if (pProgress != NULL)
{
pProgress->updateProgress("Image segmentation is compete.", 100, NORMAL);
}
pOutArgList->setPlugInArgValue("Image segmentation result", pResultCube.release());
pStep->finalize();
return true;
}
bool WaveletKSigmaFilter::execute(PlugInArgList* pInArgList, PlugInArgList* pOutArgList)
{
StepResource pStep("Wavelet K-Sigma Filter", "app", "1A4BDC34-5A95-419B-8E53-C92333AFFC3E");
if (pInArgList == NULL || pOutArgList == NULL)
{
return false;
}
Progress* pProgress = pInArgList->getPlugInArgValue<Progress>(Executable::ProgressArg());
RasterElement* pCube = pInArgList->getPlugInArgValue<RasterElement>(Executable::DataElementArg());
if (pCube == NULL)
{
std::string msg = "A raster cube must be specified.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
RasterDataDescriptor* pDesc = static_cast<RasterDataDescriptor*>(pCube->getDataDescriptor());
VERIFY(pDesc != NULL);
EncodingType ResultType = pDesc->getDataType();
if (pDesc->getDataType() == INT4SCOMPLEX)
{
ResultType = INT4SBYTES;
}
else if (pDesc->getDataType() == FLT8COMPLEX)
{
ResultType = FLT8BYTES;
}
FactoryResource<DataRequest> pRequest;
pRequest->setInterleaveFormat(BSQ);
DataAccessor pSrcAcc = pCube->getDataAccessor(pRequest.release());
ModelResource<RasterElement> pResultCube(RasterUtilities::createRasterElement(pCube->getName() +
"_Noise_Removal_Result", pDesc->getRowCount(), pDesc->getColumnCount(), ResultType));
if (pResultCube.get() == NULL)
{
std::string msg = "A raster cube could not be created.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
FactoryResource<DataRequest> pResultRequest;
pResultRequest->setWritable(true);
DataAccessor pDestAcc = pResultCube->getDataAccessor(pResultRequest.release());
Service<DesktopServices> pDesktop;
WaveletKSigmaDlg dlg(pDesktop->getMainWidget());
int stat = dlg.exec();
if (stat != QDialog::Accepted)
{
// pProgress->updateProgress("Level 4 " + StringUtilities::toDisplayString(dlg.getLevelThreshold(3))
// + " Level5 " + StringUtilities::toDisplayString(dlg.getLevelThreshold(4)), dlg.getLevelThreshold(0), NORMAL);
return true;
}
unsigned int rowLoops;
unsigned int colLoops;
unsigned int rowIndex = 0;
unsigned int colIndex = 0;
double ScaleKValue[MAX_WAVELET_LEVELS] = {0.0};
for (int k=0; k<MAX_WAVELET_LEVELS;k++)
{
ScaleKValue[k] = dlg.getLevelThreshold(k);
}
if (0 == pDesc->getRowCount()%rowBlocks)
{
rowLoops = pDesc->getRowCount()/rowBlocks;
}
else
{
rowLoops = pDesc->getRowCount()/rowBlocks + 1;
}
if (0 == pDesc->getColumnCount()%colBlocks)
{
colLoops = pDesc->getColumnCount()/colBlocks;
}
else
{
colLoops = pDesc->getColumnCount()/colBlocks + 1;
}
for (unsigned int i = 0; i < rowLoops; i++)
{
if ( rowIndex + rowBlocks > pDesc->getRowCount())
{
rowIndex = pDesc->getRowCount() - rowBlocks;
}
colIndex = 0;
for (unsigned int j = 0; j < colLoops; j++)
{
if ( colIndex + colBlocks > pDesc->getColumnCount())
{
colIndex = pDesc->getColumnCount() - colBlocks;
}
if (pProgress != NULL)
{
pProgress->updateProgress("Remove result", (i*colLoops+j) / (rowLoops*colLoops), NORMAL);
}
if (isAborted())
{
std::string msg = getName() + " has been aborted.";
pStep->finalize(Message::Abort, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ABORT);
}
return false;
}
//Process the data in current block
ProcessData(pSrcAcc, pBuffer, rowIndex, colIndex, rowBlocks, colBlocks, ScaleKValue, pDesc->getDataType());
//Output the value
for (unsigned int m = 0; m < rowBlocks; m++)
{
for (unsigned int n = 0; n < colBlocks; n++)
{
if (!pDestAcc.isValid())
{
std::string msg = "Unable to access the cube data.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
pDestAcc->toPixel(rowIndex+m, colIndex+n);
switchOnEncoding(ResultType, speckleNoiseRemove, pDestAcc->getColumn(), (pBuffer+m*colBlocks+n));
}
}
colIndex += colBlocks;
}
rowIndex += rowBlocks;
}
if (!isBatch())
{
Service<DesktopServices> pDesktop;
SpatialDataWindow* pWindow = static_cast<SpatialDataWindow*>(pDesktop->createWindow(pResultCube->getName(),
SPATIAL_DATA_WINDOW));
SpatialDataView* pView = (pWindow == NULL) ? NULL : pWindow->getSpatialDataView();
if (pView == NULL)
{
std::string msg = "Unable to create view.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
pView->setPrimaryRasterElement(pResultCube.get());
pView->createLayer(RASTER, pResultCube.get());
}
if (pProgress != NULL)
{
pProgress->updateProgress("Noise removal is compete.", 100, NORMAL);
}
pOutArgList->setPlugInArgValue("Noise removal Result", pResultCube.release());
pStep->finalize();
return true;
}
bool SamAlgorithm::processAll()
{
auto_ptr<Wavelengths> pWavelengths;
ProgressTracker progress(getProgress(), "Starting SAM", "spectral", "C4320027-6359-4F5B-8820-8BC72BF1B8F0");
progress.getCurrentStep()->addProperty("Interactive", isInteractive());
RasterElement* pElement = getRasterElement();
if (pElement == NULL)
{
progress.report(SAMERR012, 0, ERRORS, true);
return false;
}
progress.getCurrentStep()->addProperty("Cube", pElement->getName());
const RasterDataDescriptor* pDescriptor = static_cast<RasterDataDescriptor*>(pElement->getDataDescriptor());
VERIFY(pDescriptor != NULL);
BitMaskIterator iter(getPixelsToProcess(), pElement);
unsigned int numRows = iter.getNumSelectedRows();
unsigned int numColumns = iter.getNumSelectedColumns();
unsigned int numBands = pDescriptor->getBandCount();
Opticks::PixelOffset layerOffset(iter.getColumnOffset(), iter.getRowOffset());
// get cube wavelengths
DynamicObject* pMetadata = pElement->getMetadata();
if (pMetadata != NULL)
{
pWavelengths.reset(new Wavelengths(pMetadata));
if (!pWavelengths->isEmpty() && (!pWavelengths->hasEndValues() || !pWavelengths->hasStartValues()))
{
pWavelengths->calculateFwhm();
}
}
VERIFY(pWavelengths.get() != NULL);
int sig_index = 0;
bool bSuccess = true;
if (mInputs.mSignatures.empty())
{
progress.report(SAMERR005, 0, ERRORS, true);
return false;
}
int iSignatureCount = mInputs.mSignatures.size();
// Get colors for all the signatures
vector<ColorType> layerColors, excludeColors;
excludeColors.push_back(ColorType(0, 0, 0));
excludeColors.push_back(ColorType(255, 255, 255));
ColorType::getUniqueColors(iSignatureCount, layerColors, excludeColors);
// Create a vector for the signature names
vector<string> sigNames;
// Create a pseudocolor results matrix if necessary
RasterElement* pPseudocolorMatrix = NULL;
RasterElement* pLowestSAMValueMatrix = NULL;
// Check for multiple Signatures and if the user has selected
// to combined multiple results in one pseudocolor output layer
if (iSignatureCount > 1 && mInputs.mbCreatePseudocolor)
{
pPseudocolorMatrix = createResults(numRows, numColumns, mInputs.mResultsName);
pLowestSAMValueMatrix = createResults(numRows, numColumns, "LowestSAMValue");
if (pPseudocolorMatrix == NULL || pLowestSAMValueMatrix == NULL )
{
progress.report(SAMERR007, 0, ERRORS, true);
return false;
}
FactoryResource<DataRequest> pseudoRequest;
pseudoRequest->setWritable(true);
string failedDataRequestErrorMessage =
SpectralUtilities::getFailedDataRequestErrorMessage(pseudoRequest.get(), pPseudocolorMatrix);
DataAccessor pseudoAccessor = pPseudocolorMatrix->getDataAccessor(pseudoRequest.release());
if (!pseudoAccessor.isValid())
{
string msg = "Unable to access results.";
if (!failedDataRequestErrorMessage.empty())
{
msg += "\n" + failedDataRequestErrorMessage;
}
progress.report(msg, 0, ERRORS, true);
return false;
}
FactoryResource<DataRequest> lsvRequest;
lsvRequest->setWritable(true);
failedDataRequestErrorMessage =
SpectralUtilities::getFailedDataRequestErrorMessage(lsvRequest.get(), pLowestSAMValueMatrix);
DataAccessor lowestSamValueAccessor = pLowestSAMValueMatrix->getDataAccessor(lsvRequest.release());
if (!lowestSamValueAccessor.isValid())
{
string msg = "Unable to access results.";
if (!failedDataRequestErrorMessage.empty())
{
msg += "\n" + failedDataRequestErrorMessage;
}
progress.report(msg, 0, ERRORS, true);
return false;
}
//Lets zero out all the results incase we connect to an existing matrix.
float* pPseudoValue = NULL;
float* pLowestValue = NULL;
for (unsigned int row_ctr = 0; row_ctr < numRows; row_ctr++)
{
for (unsigned int col_ctr = 0; col_ctr < numColumns; col_ctr++)
{
if (!pseudoAccessor.isValid() || !lowestSamValueAccessor.isValid())
{
progress.report("Unable to access results.", 0, ERRORS, true);
return false;
}
pLowestValue = reinterpret_cast<float*>(lowestSamValueAccessor->getColumn());
pPseudoValue = reinterpret_cast<float*>(pseudoAccessor->getColumn());
//Initialize the matrices
*pPseudoValue = 0.0f;
*pLowestValue = 180.0f;
pseudoAccessor->nextColumn();
lowestSamValueAccessor->nextColumn();
}
pseudoAccessor->nextRow();
lowestSamValueAccessor->nextRow();
}
}
RasterElement* pResults = NULL;
bool resultsIsTemp = false;
// Processes each selected signature one at a time and
// accumulates results
for (sig_index = 0; bSuccess && (sig_index < iSignatureCount) && !mAbortFlag; sig_index++)
{
// Get the spectrum
Signature* pSignature = mInputs.mSignatures[sig_index];
// Create the results matrix
sigNames.push_back(pSignature->getName());
std::string rname = mInputs.mResultsName;
if (iSignatureCount > 1 && !mInputs.mbCreatePseudocolor)
{
rname += " " + sigNames.back();
}
else if (iSignatureCount > 1)
{
rname += "SamTemp";
resultsIsTemp = true;
}
pResults = createResults(numRows, numColumns, rname);
if (pResults == NULL)
{
bSuccess = false;
break;
}
//Send the message to the progress object
QString messageSigNumber = QString("Processing Signature %1 of %2 : SAM running on signature %3")
.arg(sig_index+1).arg(iSignatureCount).arg(QString::fromStdString(sigNames.back()));
string message = messageSigNumber.toStdString();
vector<double> spectrumValues;
vector<int> resampledBands;
bSuccess = resampleSpectrum(pSignature, spectrumValues, *pWavelengths.get(), resampledBands);
// Check for limited spectral coverage and warning log
if (bSuccess && pWavelengths->hasCenterValues() &&
resampledBands.size() != pWavelengths->getCenterValues().size())
{
QString buf = QString("Warning SamAlg014: The spectrum only provides spectral coverage for %1 of %2 bands.")
.arg(resampledBands.size()).arg(pWavelengths->getCenterValues().size());
progress.report(buf.toStdString(), 0, WARNING, true);
}
if (bSuccess)
{
BitMaskIterator iterChecker(getPixelsToProcess(), pElement);
SamAlgInput samInput(pElement, pResults, spectrumValues, &mAbortFlag, iterChecker, resampledBands);
//Output Structure
SamAlgOutput samOutput;
// Reports current Spectrum SAM is running on
mta::ProgressObjectReporter reporter(message, getProgress());
// Initializes all threads
mta::MultiThreadedAlgorithm<SamAlgInput, SamAlgOutput, SamThread>
mtaSam(Service<ConfigurationSettings>()->getSettingThreadCount(),
samInput,
samOutput,
&reporter);
// Calculates spectral angle for current signature
mtaSam.run();
if (samInput.mpResultsMatrix == NULL)
{
Service<ModelServices>()->destroyElement(pResults);
progress.report(SAMERR006, 0, ERRORS, true);
mAbortFlag = false;
return false;
}
if ((isInteractive() || mInputs.mbDisplayResults) && iSignatureCount > 1 && mInputs.mbCreatePseudocolor)
{
// Merges results in to one output layer if a Pseudocolor
// output layer has been selected
FactoryResource<DataRequest> pseudoRequest, currentRequest, lowestRequest;
pseudoRequest->setWritable(true);
string failedDataRequestErrorMessage =
SpectralUtilities::getFailedDataRequestErrorMessage(pseudoRequest.get(), pPseudocolorMatrix);
DataAccessor daPseudoAccessor = pPseudocolorMatrix->getDataAccessor(pseudoRequest.release());
if (!daPseudoAccessor.isValid())
{
string msg = "Unable to access data.";
if (!failedDataRequestErrorMessage.empty())
{
msg += "\n" + failedDataRequestErrorMessage;
}
progress.report(msg, 0, ERRORS, true);
return false;
}
DataAccessor daCurrentAccessor = pResults->getDataAccessor(currentRequest.release());
lowestRequest->setWritable(true);
failedDataRequestErrorMessage =
SpectralUtilities::getFailedDataRequestErrorMessage(lowestRequest.get(), pLowestSAMValueMatrix);
DataAccessor daLowestSAMValue = pLowestSAMValueMatrix->getDataAccessor(lowestRequest.release());
if (!daLowestSAMValue.isValid())
{
string msg = "Unable to access data.";
if (!failedDataRequestErrorMessage.empty())
{
msg += "\n" + failedDataRequestErrorMessage;
}
progress.report(msg, 0, ERRORS, true);
return false;
}
float* pPseudoValue = NULL;
float* pCurrentValue = NULL;
float* pLowestValue = NULL;
for (unsigned int row_ctr = 0; row_ctr < numRows; row_ctr++)
{
for (unsigned int col_ctr = 0; col_ctr < numColumns; col_ctr++)
{
if (!daPseudoAccessor.isValid() || !daCurrentAccessor.isValid())
{
Service<ModelServices>()->destroyElement(pResults);
progress.report("Unable to access data.", 0, ERRORS, true);
return false;
}
daPseudoAccessor->toPixel(row_ctr, col_ctr);
daCurrentAccessor->toPixel(row_ctr, col_ctr);
pPseudoValue = reinterpret_cast<float*>(daPseudoAccessor->getColumn());
pCurrentValue = reinterpret_cast<float*>(daCurrentAccessor->getColumn());
daLowestSAMValue->toPixel(row_ctr, col_ctr);
pLowestValue = reinterpret_cast<float*>(daLowestSAMValue->getColumn());
if (*pCurrentValue <= mInputs.mThreshold)
{
if (*pCurrentValue < *pLowestValue)
{
*pPseudoValue = sig_index+1;
*pLowestValue = *pCurrentValue;
}
}
}
}
}
else
{
ColorType color;
if (sig_index <= static_cast<int>(layerColors.size()))
{
color = layerColors[sig_index];
}
double dMaxValue = pResults->getStatistics()->getMax();
// Displays results for current signature
displayThresholdResults(pResults, color, LOWER, mInputs.mThreshold, dMaxValue, layerOffset);
}
//If we are on the last signature then destroy the lowest value Matrix
if (sig_index == iSignatureCount-1)
{
if (pLowestSAMValueMatrix != NULL)
{
Service<ModelServices>()->destroyElement(pLowestSAMValueMatrix);
pLowestSAMValueMatrix = NULL;
}
}
}
} //End of Signature Loop Counter
if (resultsIsTemp || !bSuccess)
{
Service<ModelServices>()->destroyElement(pResults);
pResults = NULL;
}
if (bSuccess)
{
// Displays final Pseudocolor output layer results
if ((isInteractive() || mInputs.mbDisplayResults) && iSignatureCount > 1 && mInputs.mbCreatePseudocolor)
{
displayPseudocolorResults(pPseudocolorMatrix, sigNames, layerOffset);
}
}
// Aborts gracefully after clean up
if (mAbortFlag)
{
progress.abort();
mAbortFlag = false;
return false;
}
if (bSuccess)
{
if (pPseudocolorMatrix != NULL)
{
mpResults = pPseudocolorMatrix;
mpResults->updateData();
}
else if (pResults != NULL)
{
mpResults = pResults;
mpResults->updateData();
}
else
{
progress.report(SAMERR016, 0, ERRORS, true);
return false;
}
progress.report(SAMNORM200, 100, NORMAL);
}
progress.getCurrentStep()->addProperty("Display Layer", mInputs.mbDisplayResults);
progress.getCurrentStep()->addProperty("Threshold", mInputs.mThreshold);
progress.upALevel();
return bSuccess;
}
bool KDISTRIBUTION::execute(PlugInArgList* pInArgList, PlugInArgList* pOutArgList)
{
StepResource pStep("KDISTRIBUTION", "app10", "F298D57C-D816-42F0-AE27-43DAA02C0544");
if (pInArgList == NULL || pOutArgList == NULL)
{
return false;
}
Progress* pProgress = pInArgList->getPlugInArgValue<Progress>(Executable::ProgressArg());
RasterElement* pCube = pInArgList->getPlugInArgValue<RasterElement>(Executable::DataElementArg());
if (pCube == NULL)
{
std::string msg = "A raster cube must be specified.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
RasterDataDescriptor* pDesc = static_cast<RasterDataDescriptor*>(pCube->getDataDescriptor());
VERIFY(pDesc != NULL);
FactoryResource<DataRequest> pRequest;
FactoryResource<DataRequest> pRequest2;
pRequest->setInterleaveFormat(BSQ);
pRequest2->setInterleaveFormat(BSQ);
DataAccessor pAcc = pCube->getDataAccessor(pRequest.release());
DataAccessor pAcc2 = pCube->getDataAccessor(pRequest2.release());
ModelResource<RasterElement> pResultCube(RasterUtilities::createRasterElement(pCube->getName() +
"Result", pDesc->getRowCount(), pDesc->getColumnCount(), pDesc->getDataType()));
if (pResultCube.get() == NULL)
{
std::string msg = "A raster cube could not be created.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
FactoryResource<DataRequest> pResultRequest;
pResultRequest->setWritable(true);
DataAccessor pDestAcc = pResultCube->getDataAccessor(pResultRequest.release());
const RasterDataDescriptor* pDescriptor = dynamic_cast<const RasterDataDescriptor*>(pCube->getDataDescriptor());
int tester_count = 0;
int eastCol = 0;
int northRow = 0;
int westCol = 0;
int southRow = 0;
double zstatistic = 0;
double total = 0.0;
double total_sum = 0.0;
double mean = 0.0;
double std = 0.0;
double a=0;
int rowSize=pDesc->getRowCount();
int colSize=pDesc->getColumnCount();
int prevCol = 0;
int prevRow = 0;
int nextCol = 0;
int nextRow = 0;
double long PFA = 0.0;
int DEPTH1 = 10;
int DEPTH2 = 10;
int DEPTH3 = 1;
int DEPTH4 = 1;
int count=0;
int zero=0;
double long threshold = 100000.0;
double look_table1[24][6];
for(int i=0; i<24; i++)
{
for(int j=0; j<3; j++)
{
look_table1[i][j]=0.0;
}
}
QStringList Names("0.0000001");
QString value = QInputDialog::getItem(Service<DesktopServices>()->getMainWidget(),
"Input a PFA value", "Input a PFA value (0.0000001 or 0.00000001)", Names);
std::string strAoi = value.toStdString();
std::istringstream stm;
stm.str(strAoi);
//stm >> PFA;
PFA=::atof(strAoi.c_str());
if (PFA==0.0000001)
{
look_table1[0][0]=1.0;
look_table1[0][1]=5.0;
look_table1[0][2]=32.3372530103729330;
look_table1[1][0]=1.0;
look_table1[1][1]=10.0;
look_table1[1][2]=25.0723580041031010;
look_table1[2][0]=1.0;
look_table1[2][1]=15.0;
look_table1[2][2]=22.3991160013551250;
look_table1[3][0]=1.0;
look_table1[3][1]=20.0;
look_table1[3][2]=20.9821949998985920;
look_table1[4][1]=1.0;
look_table1[4][2]=40.0;
look_table1[5][3]=18.7055519975583020;
look_table1[5][1]=1.0;
look_table1[5][2]=90.0;
look_table1[5][3]=18.7055519975583020;
look_table1[6][0]=2.0;
look_table1[6][1]=5.0;
look_table1[6][2]=20.2619339991581950;
look_table1[7][0]=2.0;
look_table1[7][1]=10.0;
look_table1[7][2]=15.4860609951617470;
look_table1[8][0]=2.0;
look_table1[8][1]=15.0;
look_table1[8][2]=13.7276789964777210;
look_table1[9][0]=2.0;
look_table1[9][1]=20.0;
look_table1[9][2]=12.7942589971762930;
look_table1[10][0]=2.0;
look_table1[10][1]=40.0;
look_table1[10][2]=11.2895769983023970;
look_table1[11][0]=2.0;
look_table1[11][1]=90.0;
look_table1[11][2]=10.3695259989909640;
look_table1[12][0]=3.0;
look_table1[12][1]=5.0;
look_table1[12][2]=15.9102209948443050;
look_table1[13][0]=3.0;
look_table1[13][1]=10.0;
look_table1[13][2]=12.0443629977375150;
look_table1[14][0]=3.0;
look_table1[14][1]=15.0;
look_table1[14][2]=10.6203179988032710;
look_table1[15][0]=3.0;
look_table1[15][1]=20.0;
look_table1[15][2]=9.8635499993696367;
look_table1[16][0]=3.0;
look_table1[16][1]=40.0;
look_table1[16][2]=8.6407550002847771;
look_table1[17][0]=3.0;
look_table1[17][1]=90.0;
look_table1[17][2]=7.8893780007488568;
look_table1[18][0]=4.0;
look_table1[18][1]=5.0;
look_table1[18][2]=13.6166519965608130;
look_table1[19][0]=4.0;
look_table1[19][1]=10.0;
look_table1[19][2]=10.2336029990926890;
look_table1[20][0]=4.0;
look_table1[20][1]=15.0;
look_table1[20][2]=10.6203179988032710;
look_table1[21][0]=4.0;
look_table1[21][1]=20.0;
look_table1[21][2]=8.9868610000257512;
look_table1[22][0]=4.0;
look_table1[22][1]=40.0;
look_table1[22][2]=7.2502150006595159;
look_table1[23][0]=4.0;
look_table1[23][1]=90.0;
look_table1[23][2]=6.5879140005669408;
}
if (PFA==0.00000001)
{
look_table1[0][0]=1.0;
look_table1[0][1]=5.0;
look_table1[0][2]=20.0000019988889410;
look_table1[1][0]=1.0;
look_table1[1][1]=10.0;
look_table1[1][2]=20.0000019988889410;
look_table1[2][0]=1.0;
look_table1[2][1]=15.0;
look_table1[2][2]=20.0000019988889410;
look_table1[3][0]=1.0;
look_table1[3][1]=20.0;
look_table1[3][2]=20.0000019988889410;
look_table1[4][1]=1.0;
look_table1[4][2]=40.0;
look_table1[5][3]=20.0000019988889410;
look_table1[5][1]=1.0;
look_table1[5][2]=90.0;
look_table1[5][3]=20.0000019988889410;
look_table1[6][0]=2.0;
look_table1[6][1]=5.0;
look_table1[6][2]=18.3243529971664460;
look_table1[7][0]=2.0;
look_table1[7][1]=10.0;
look_table1[7][2]=18.3243529971664460;
look_table1[8][0]=2.0;
look_table1[8][1]=15.0;
look_table1[8][2]=16.0869139948664570;
look_table1[9][0]=2.0;
look_table1[9][1]=20.0;
look_table1[9][2]=14.8998299956004820;
look_table1[10][0]=2.0;
look_table1[10][1]=40.0;
look_table1[10][2]=12.9846719970337880;
look_table1[11][0]=2.0;
look_table1[11][1]=90.0;
look_table1[11][2]=11.8094659979133120;
look_table1[12][0]=3.0;
look_table1[12][1]=5.0;
look_table1[12][2]=18.9816659978421360;
look_table1[13][0]=3.0;
look_table1[13][1]=10.0;
look_table1[13][2]=14.1167729961865230;
look_table1[14][0]=3.0;
look_table1[14][1]=15.0;
look_table1[14][2]=12.3304539975234050;
look_table1[15][0]=3.0;
look_table1[15][1]=20.0;
look_table1[15][2]=11.3819769982332450;
look_table1[16][0]=3.0;
look_table1[16][1]=40.0;
look_table1[16][2]=9.8488249993806569;
look_table1[17][0]=3.0;
look_table1[17][1]=90.0;
look_table1[17][2]=8.9039850000877756;
look_table1[18][0]=4.0;
look_table1[18][1]=5.0;
look_table1[18][2]=16.1272319949079020;
look_table1[19][0]=4.0;
look_table1[19][1]=10.0;
look_table1[19][2]=11.9117899978367330;
look_table1[20][0]=4.0;
look_table1[20][1]=15.0;
look_table1[20][2]=10.3636999989953240;
look_table1[21][0]=4.0;
look_table1[21][1]=20.0;
look_table1[21][2]=9.5411879996108926;
look_table1[22][0]=4.0;
look_table1[22][1]=40.0;
look_table1[22][2]=8.2095870006074634;
look_table1[23][0]=4.0;
look_table1[23][1]=90.0;
look_table1[23][2]=7.3860650006785047;
}
QStringList Names1("10");
QString value1 = QInputDialog::getItem(Service<DesktopServices>()->getMainWidget(),
"Input the size of the window width", "Input the size of the window width in terms of the number of pixels (eg. 10)", Names1);
std::string strAoi1 = value1.toStdString();
std::istringstream stm1;
stm1.str(strAoi1);
//stm1 >> DEPTH1;
DEPTH1=::atof(strAoi1.c_str());
QStringList Names2("10");
QString value2 = QInputDialog::getItem(Service<DesktopServices>()->getMainWidget(),
"Input the size of the window height", "Input the size of the window height in terms of the number of pixels (eg. 10)", Names2);
std::string strAoi2 = value2.toStdString();
std::istringstream stm2;
stm2.str(strAoi2);
//stm2 >> DEPTH2;
DEPTH2=::atof(strAoi2.c_str());
QStringList Names3("1");
QString value3 = QInputDialog::getItem(Service<DesktopServices>()->getMainWidget(),
"Input the size of the gaurd width", "Input the size of the guard width in terms of the number of pixels (eg. 1)", Names3);
std::string strAoi3 = value3.toStdString();
std::istringstream stm3;
stm3.str(strAoi3);
//stm3 >> DEPTH3;
DEPTH3=::atof(strAoi3.c_str());
QStringList Names4("1");
QString value4 = QInputDialog::getItem(Service<DesktopServices>()->getMainWidget(),
"Input the size of the guard height", "Input the size of the guard height in terms of the number of pixels (eg. 1)", Names4);
std::string strAoi4 = value4.toStdString();
std::istringstream stm4;
stm4.str(strAoi4);
stm4 >> DEPTH4;
DEPTH4=::atof(strAoi4.c_str());
for (int row = 0; row < rowSize; ++row)
{
if (isAborted())
{
std::string msg = getName() + " has been aborted.";
pStep->finalize(Message::Abort, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ABORT);
}
return false;
}
if (!pAcc.isValid())
{
std::string msg = "Unable to access the cube data.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
if (pProgress != NULL)
{
pProgress->updateProgress("Calculating statistics", row * 100 / pDesc->getRowCount(), NORMAL);
}
for (int col = 0; col < colSize; ++col)
{
//p[col]=pAcc2->getColumnAsInteger();
westCol=max(col-DEPTH1,zero);
northRow=max(row-DEPTH2,zero);
eastCol=min(colSize-1,col+DEPTH1);
southRow=min(rowSize-1,row+DEPTH2);
prevCol=max(col-DEPTH3,zero);
prevRow=max(row-DEPTH4,zero);
nextCol=min(col+DEPTH3,colSize-1);
nextRow=min(row+DEPTH4,rowSize-1);
pAcc2->toPixel(northRow,westCol);
for(int row1=northRow; row1 < southRow+1; ++row1)
{
for (int col1=westCol; col1 < eastCol+1; ++col1)
{
if((row1>=prevRow && row1<=nextRow) && (col1>=prevCol && col1<=nextCol))
{
continue;
}
else
{
updateStatistics3(pAcc2->getColumnAsDouble(), total, total_sum, count);
}
pAcc2->nextColumn();
}
pAcc2->nextRow();
}
mean = total / count;
std = sqrt(total_sum / count - mean * mean);
int ELVI = (mean/std)*(mean/std);
int v = (ELVI+1)/((ELVI*mean/(std*std))-1);
pAcc2->toPixel(row,col);
pDestAcc->toPixel(row,col);
zstatistic = (pAcc2->getColumnAsDouble()-mean)/std;
if(v<=7 && v>=0)
{ v=5;
}
if(v<=12 && v>7)
{
v=10;
}
if(v<=17 && v>12)
{
v=15;
}
if(v<=30 && v>17)
{
v=20;
}
if(v<=65 && v>30)
{
v=40;
}
if(v<=90 && v>65)
{
v=90;
}
for(int i=0; i<24; i++)
{
if((look_table1[i][0]=ELVI) && (look_table1[i][1]==v))
{
threshold=look_table1[i][2];
}
}
if(zstatistic>threshold)
{
switchOnEncoding(pDesc->getDataType(), conversion1, pDestAcc->getColumn(), 1000.0);
}
else
{
switchOnEncoding(pDesc->getDataType(), conversion1, pDestAcc->getColumn(), 0.0);
}
total = 0.0;
total_sum=0.0;
threshold=100000.0;
mean = 0.0;
std = 0.0;
count=0;
pAcc->nextColumn();
}
pAcc->nextRow();
}
// Create a GCP layer
/*
SpatialDataWindow* pWindow = dynamic_cast<SpatialDataWindow*>(Service<DesktopServices>()->createWindow(pResultCube.get()->getName(), SPATIAL_DATA_WINDOW));
SpatialDataView* pView = pWindow->getSpatialDataView();
*/
Service<DesktopServices> pDesktop;
SpatialDataWindow* pWindow = static_cast<SpatialDataWindow*>(pDesktop->createWindow(pResultCube->getName(),
SPATIAL_DATA_WINDOW));
SpatialDataView* pView = (pWindow == NULL) ? NULL : pWindow->getSpatialDataView();
if (pView == NULL)
{
std::string msg = "Unable to create view.";
pStep->finalize(Message::Failure, msg);
if (pProgress != NULL)
{
pProgress->updateProgress(msg, 0, ERRORS);
}
return false;
}
pView->setPrimaryRasterElement(pResultCube.get());
pView->createLayer(RASTER, pResultCube.get());
// Create the GCP list
if (pCube->isGeoreferenced() == true)
{
const vector<DimensionDescriptor>& rows = pDescriptor->getRows();
const vector<DimensionDescriptor>& columns = pDescriptor->getColumns();
if ((rows.empty() == false) && (columns.empty() == false))
{
// Get the geocoordinates at the chip corners
/*
VERIFYNRV(rows.front().isActiveNumberValid() == true);
VERIFYNRV(rows.back().isActiveNumberValid() == true);
VERIFYNRV(columns.front().isActiveNumberValid() == true);
VERIFYNRV(columns.back().isActiveNumberValid() == true);
*/
unsigned int startRow = rows.front().getActiveNumber();
unsigned int endRow = rows.back().getActiveNumber();
unsigned int startCol = columns.front().getActiveNumber();
unsigned int endCol = columns.back().getActiveNumber();
GcpPoint ulPoint;
ulPoint.mPixel = LocationType(startCol, startRow);
ulPoint.mCoordinate = pCube->convertPixelToGeocoord(ulPoint.mPixel);
GcpPoint urPoint;
urPoint.mPixel = LocationType(endCol, startRow);
urPoint.mCoordinate = pCube->convertPixelToGeocoord(urPoint.mPixel);
GcpPoint llPoint;
llPoint.mPixel = LocationType(startCol, endRow);
llPoint.mCoordinate = pCube->convertPixelToGeocoord(llPoint.mPixel);
GcpPoint lrPoint;
lrPoint.mPixel = LocationType(endCol, endRow);
lrPoint.mCoordinate = pCube->convertPixelToGeocoord(lrPoint.mPixel);
GcpPoint centerPoint;
centerPoint.mPixel = LocationType((startCol + endCol) / 2, (startRow + endRow) / 2);
centerPoint.mCoordinate = pCube->convertPixelToGeocoord(centerPoint.mPixel);
/*
// Reset the coordinates to be in active numbers relative to the chip
const vector<DimensionDescriptor>& chipRows = pDescriptor->getRows();
const vector<DimensionDescriptor>& chipColumns = pDescriptor->getColumns();
VERIFYNRV(chipRows.front().isActiveNumberValid() == true);
VERIFYNRV(chipRows.back().isActiveNumberValid() == true);
VERIFYNRV(chipColumns.front().isActiveNumberValid() == true);
VERIFYNRV(chipColumns.back().isActiveNumberValid() == true);
unsigned int chipStartRow = chipRows.front().getActiveNumber();
unsigned int chipEndRow = chipRows.back().getActiveNumber();
unsigned int chipStartCol = chipColumns.front().getActiveNumber();
unsigned int chipEndCol = chipColumns.back().getActiveNumber();
ulPoint.mPixel = LocationType(chipStartCol, chipStartRow);
urPoint.mPixel = LocationType(chipEndCol, chipStartRow);
llPoint.mPixel = LocationType(chipStartCol, chipEndRow);
lrPoint.mPixel = LocationType(chipEndCol, chipEndRow);
centerPoint.mPixel = LocationType((chipStartCol + chipEndCol) / 2, (chipStartRow + chipEndRow) / 2);
*/
Service<ModelServices> pModel;
GcpList* pGcpList = static_cast<GcpList*>(pModel->createElement("Corner Coordinates",
TypeConverter::toString<GcpList>(), pResultCube.get()));
if (pGcpList != NULL)
{
list<GcpPoint> gcps;
gcps.push_back(ulPoint);
gcps.push_back(urPoint);
gcps.push_back(llPoint);
gcps.push_back(lrPoint);
gcps.push_back(centerPoint);
pGcpList->addPoints(gcps);
pView->createLayer(GCP_LAYER, pGcpList);
}
}
}
if (pProgress != NULL)
{
pProgress->updateProgress("CFAR is compete.", 100, NORMAL);
}
pOutArgList->setPlugInArgValue("Result", pResultCube.release());
pStep->finalize();
return true;
}
void toPixel(int x, int y) {
dataAccessor->toPixel(y, x);
if (!dataAccessor.isValid()) { qDebug("DataAccessor invalid after toPixel"); /* throw exception */ }
}
