Genotype* Genotypes::loadGenotype(string& content)
{
// cerr << "loading genotype start" << endl;
Genotype* gt = new Genotype();
string passToBody;
string passToBrain;
string line = Parser::Instance()->returnUntillStrip( "\n", content );
while ( !line.empty() )
{
// adamdist=690;
if ( Parser::Instance()->beginMatchesStrip( "adamdist=", line ) )
{
string AD = Parser::Instance()->returnUntillStrip( ";", line );
//cerr << "AD: " << AD << endl;
if(EOF == sscanf(AD.c_str(), "%d", >->adamdist)) cerr << "ERROR INSERTING CRITTER" << endl;
}
// the rest goes to the body or brain
else
{
if (
Parser::Instance()->beginMatches( "color=", line ) ||
Parser::Instance()->beginMatches( "retinasize=", line ) ||
Parser::Instance()->beginMatches( "b ", line ) ||
Parser::Instance()->beginMatches( "m ", line ) ||
Parser::Instance()->beginMatches( "c ", line ) ||
Parser::Instance()->beginMatches( "cm ", line )
)
{
passToBody.append(line);
passToBody.append("\n");
}
else
{
passToBrain.append(line);
passToBrain.append("\n");
}
}
line = Parser::Instance()->returnUntillStrip( "\n", content );
}
gt->bodyArch->setArch(&passToBody);
gt->registerBrainInputOutputs();
gt->brainzArch->setArch(&passToBrain);
gt->count=1;
gt->speciescolor = colorH.randomColorRGB().getNormalized();
list.push_back(gt);
// genotype = genotypes->newg(passToBody, passToBrain, retinasize); // FIXME, with a speciesID
// genotype->bodyArch->setArch(&passToBody);
// genotype->brainzArch->setArch(&passToBrain);
// cerr << "loading genotype end" << endl;
return gt;
}
Genotype* Genotypes::copy(Genotype* gt, bool brainmutant, unsigned int brruns, bool bodymutant, unsigned int boruns)
{
// cerr << " gentotype copy start" << endl;
if ( bodymutant || brainmutant )
{
Genotype* newgt = new Genotype();
newgt->bodyArch->copyFrom(gt->bodyArch);
if ( bodymutant )
{
unsigned int runs = BeRand::Instance()->get(1, boruns);
newgt->bodyArch->mutate( runs );
}
newgt->registerBrainInputOutputs();
newgt->brainzArch->copyFrom(gt->brainzArch);
if ( bodymutant )
newgt->brainzArch->removeObsoleteMotorsAndSensors();
if ( brainmutant )
{
unsigned int runs = BeRand::Instance()->get(1, brruns);
newgt->brainzArch->mutate( runs );
}
newgt->count=1;
newgt->adamdist = gt->adamdist+1;
if ( BeRand::Instance()->get( 1 , 1000) <= Settings::Instance()->getCVar("critter_mutate_carnivore") && Settings::Instance()->getCVar("critter_enablecarnivores") == 1 )
{
if (gt->crittertype == 1 )
newgt->crittertype = 0;
else newgt->crittertype = 1;
}
else
newgt->crittertype = gt->crittertype;
newgt->speciescolor = colorH.randomBeColorRGB().getNormalized();
list.push_back(newgt);
// cerr << " gentotype copy end" << endl;
return newgt;
}
else
{
add(gt);
// cerr << " gentotype copy end" << endl;
return gt;
}
// cerr << " copied genotype " << list.size() << endl;
}
Genotype* Genotypes::copy(Genotype* gt, bool brainmutant, unsigned int brruns, bool bodymutant, unsigned int boruns)
{
// cerr << " gentotype copy start" << endl;
if ( bodymutant || brainmutant )
{
Genotype* newgt = new Genotype();
newgt->bodyArch->copyFrom(gt->bodyArch);
if ( bodymutant )
{
unsigned int runs = RandGen::Instance()->get(1, boruns);
newgt->bodyArch->mutate( runs );
}
newgt->registerBrainInputOutputs();
newgt->brainzArch->copyFrom(gt->brainzArch);
if ( bodymutant )
newgt->brainzArch->removeObsoleteMotorsAndSensors();
if ( brainmutant )
{
unsigned int runs = RandGen::Instance()->get(1, brruns);
newgt->brainzArch->mutate( runs );
}
newgt->count=1;
newgt->adamdist = gt->adamdist+1;
newgt->speciescolor = colorH.randomColorRGB().getNormalized();
list.push_back(newgt);
// cerr << " gentotype copy end" << endl;
return newgt;
}
else
{
add(gt);
// cerr << " gentotype copy end" << endl;
return gt;
}
// cerr << " copied genotype " << list.size() << endl;
}
Genotype* Genotypes::newg( Settings* settings )
{
// cerr << " gentotype start" << endl;
Genotype* gt = new Genotype();
gt->bodyArch->retinasize = settings->getCVar("critter_retinasize");
gt->bodyArch->color = colorH.randomColorRGB();
gt->bodyArch->buildArch();
gt->registerBrainInputOutputs();
gt->brainzArch->maxNeurons = settings->getCVar("brain_maxneurons");
gt->brainzArch->minSynapses = settings->getCVar("brain_minsynapses");
gt->brainzArch->maxSynapses = settings->getCVar("brain_maxsynapses");
gt->brainzArch->minNeuronsAtBuildtime = settings->getCVar("brain_minneuronsatbuildtime");
gt->brainzArch->maxNeuronsAtBuildtime = settings->getCVar("brain_maxneuronsatbuildtime");
gt->brainzArch->minSynapsesAtBuildtime = settings->getCVar("brain_minsynapsesatbuildtime");
// brain.mutate_minSynapsesAtBuildtime = settings->getCVar("brain_mutate_minsynapsesatbuildtime");
gt->brainzArch->maxSynapsesAtBuildtime = settings->getCVar("brain_maxsynapsesatbuildtime");
// brain.mutate_maxSynapsesAtBuildtime = settings->getCVar("brain_mutate_maxsynapsesatbuildtime");
gt->brainzArch->percentChanceInhibitoryNeuron = settings->getCVar("brain_percentchanceinhibitoryneuron");
gt->brainzArch->mutate_percentChanceInhibitoryNeuron = settings->getCVar("brain_mutate_percentchanceinhibitoryneuron");
gt->brainzArch->percentChanceMotorNeuron = settings->getCVar("brain_percentchancemotorneuron");
gt->brainzArch->mutate_percentChanceMotorNeuron = settings->getCVar("brain_mutate_percentchancemotorneuron");
gt->brainzArch->percentChancePlasticNeuron = settings->getCVar("brain_percentchanceplasticneuron");
gt->brainzArch->mutate_percentChancePlasticNeuron = settings->getCVar("brain_mutate_percentchanceplasticneuron");
gt->brainzArch->minPlasticityStrengthen = settings->getCVar("brain_minplasticitystrengthen");
gt->brainzArch->maxPlasticityStrengthen = settings->getCVar("brain_maxplasticitystrengthen");
gt->brainzArch->minPlasticityWeaken = settings->getCVar("brain_minplasticityweaken");
gt->brainzArch->maxPlasticityWeaken = settings->getCVar("brain_maxplasticityweaken");
gt->brainzArch->mutate_PlasticityFactors = settings->getCVar("brain_mutate_plasticityfactors");
gt->brainzArch->minFiringThreshold = settings->getCVar("brain_minfiringthreshold");
gt->brainzArch->mutate_minFiringThreshold = settings->getCVar("brain_mutate_minfiringthreshold");
gt->brainzArch->maxFiringThreshold = settings->getCVar("brain_maxfiringthreshold");
gt->brainzArch->mutate_maxFiringThreshold = settings->getCVar("brain_mutate_maxfiringthreshold");
gt->brainzArch->maxDendridicBranches = settings->getCVar("brain_maxdendridicbranches");
gt->brainzArch->mutate_maxDendridicBranches = settings->getCVar("brain_mutate_maxdendridicbranches");
gt->brainzArch->percentChanceConsistentSynapses = settings->getCVar("brain_percentchanceconsistentsynapses");
gt->brainzArch->mutate_percentChanceConsistentSynapses = settings->getCVar("brain_mutate_percentchanceconsistentsynapses");
gt->brainzArch->percentChanceInhibitorySynapses = settings->getCVar("brain_percentchanceinhibitorysynapses");
gt->brainzArch->mutate_percentChanceInhibitorySynapses = settings->getCVar("brain_mutate_percentchanceinhibitorysynapses");
gt->brainzArch->percentChanceSensorySynapse = settings->getCVar("brain_percentchancesensorysynapse");
gt->brainzArch->mutate_percentChanceSensorySynapse = settings->getCVar("brain_mutate_percentchancesensorysynapse");
gt->brainzArch->percentMutateEffectAddNeuron = settings->getCVar("brain_percentmutateeffectaddneuron");
gt->brainzArch->percentMutateEffectRemoveNeuron = settings->getCVar("brain_percentmutateeffectremoveneuron");
gt->brainzArch->percentMutateEffectAlterNeuron = settings->getCVar("brain_percentmutateeffectalterneuron");
gt->brainzArch->percentMutateEffectAddSynapse = settings->getCVar("brain_percentmutateeffectaddsynapse");
gt->brainzArch->percentMutateEffectRemoveSynapse = settings->getCVar("brain_percentmutateeffectremovesynapse");
gt->brainzArch->mutate_MutateEffects = settings->getCVar("brain_mutate_mutateeffects");
gt->brainzArch->buildArch();
gt->count=1;
gt->adamdist=0;
gt->speciescolor = colorH.randomColorRGB().getNormalized();
list.push_back(gt);
// cerr << " new genotype " << list.size() << endl;
return gt;
}
