void YarrGui::doScan(QString qn){
std::ofstream *tmpOfCout = new std::ofstream("deleteMeCout.txt");
std::streambuf *coutBuf = std::cout.rdbuf(tmpOfCout->rdbuf());
std::ofstream *tmpOfCerr = new std::ofstream("deleteMeCerr.txt");
std::streambuf *cerrBuf = std::cerr.rdbuf(tmpOfCerr->rdbuf());
int N = ui->feTree->topLevelItemCount();
int M = scanVec.size();
for(int j = 0; j < N; j++){
scanDone = false;
processorDone = false;
if(!(ui->feTree->topLevelItem(j)->child(4)->checkState(1))){continue;} //Is the Scan checkbox checked?
Fei4 * fe = dynamic_cast<Fei4*>(bk->feList.at(j));
ScanBase * s = nullptr;
if(qn == "NS") {s = new Fei4NoiseScan(bk);}
if(qn == "DS") {s = new Fei4DigitalScan(bk);}
if(qn == "AS") {s = new Fei4AnalogScan(bk);}
if(qn == "TS") {s = new Fei4ThresholdScan(bk);}
if(qn == "ToTS") {s = new Fei4TotScan(bk);}
if(qn == "GTT") {s = new Fei4GlobalThresholdTune(bk);}
if(qn == "GPT") {s = new Fei4GlobalPreampTune(bk);}
if(qn == "PTT") {s = new Fei4PixelThresholdTune(bk);}
if(qn == "PPT") {s = new Fei4PixelPreampTune(bk);}
if(qn == "CS") {s = &cs;}
if(s == nullptr){
std::cerr << "Invalid scan QString parameter passed or scan object construction failed. Returning...\n";
return;
}
QTreeWidgetItem * plotTreeItem = nullptr; //Plot tree item for current FE
for(int k = 0; k < ui->plotTree->topLevelItemCount(); k++){ //Is the current FE already in the tree? ...
if(ui->plotTree->topLevelItem(k)->text(0) == ui->feTree->topLevelItem(j)->text(0)){
plotTreeItem = ui->plotTree->topLevelItem(k);
break;
}
}
if(plotTreeItem == nullptr){ //... if not: create a branch for it
plotTreeItem = new QTreeWidgetItem(ui->plotTree);
plotTreeItem->setText(0, ui->feTree->topLevelItem(j)->text(0));
}
QTreeWidgetItem * plotTreeItemDS = new QTreeWidgetItem(); //plot tree item for current scan
plotTreeItemDS->setText(0, qn);
plotTreeItem->addChild(plotTreeItemDS);
fe->histogrammer = new Fei4Histogrammer();
fe->histogrammer->connect(fe->clipDataFei4, fe->clipHisto);
fe->ana = new Fei4Analysis(bk, fe->getRxChannel());
fe->ana->connect(s, fe->clipHisto, fe->clipResult);
if (qn=="CS"){
CustomScan * tmp;
tmp = dynamic_cast<CustomScan*>(s);
if(tmp->bA.at(OCC_MAP) == true) {fe->histogrammer->addHistogrammer(new OccupancyMap());}
if(tmp->bA.at(TOT_MAP) == true) {fe->histogrammer->addHistogrammer(new TotMap());}
if(tmp->bA.at(TOT_2_MAP) == true) {fe->histogrammer->addHistogrammer(new Tot2Map());}
if(tmp->bA.at(OCC_ANA) == true) {fe->ana->addAlgorithm(new OccupancyAnalysis());}
if(tmp->bA.at(NOISE_ANA) == true) {fe->ana->addAlgorithm(new NoiseAnalysis());}
if(tmp->bA.at(TOT_ANA) == true) {fe->ana->addAlgorithm(new TotAnalysis());}
if(tmp->bA.at(S_CU_FIT) == true) {fe->ana->addAlgorithm(new ScurveFitter());}
if(tmp->bA.at(PIX_THR) == true) {fe->ana->addAlgorithm(new OccPixelThresholdTune);}
}else{
fe->histogrammer->addHistogrammer(new OccupancyMap());
if (qn == "ToTS" || qn == "GPT" || qn == "PPT"){
fe->histogrammer->addHistogrammer(new TotMap());
fe->histogrammer->addHistogrammer(new Tot2Map());
}
if(qn == "NS") {fe->ana->addAlgorithm(new NoiseAnalysis());}
if(qn == "DS") {fe->ana->addAlgorithm(new OccupancyAnalysis());}
if(qn == "AS") {fe->ana->addAlgorithm(new OccupancyAnalysis());}
if(qn == "TS") {fe->ana->addAlgorithm(new ScurveFitter());}
if(qn == "ToTS") {fe->ana->addAlgorithm(new TotAnalysis());}
if(qn == "GTT") {fe->ana->addAlgorithm(new OccGlobalThresholdTune());}
if(qn == "GPT") {fe->ana->addAlgorithm(new TotAnalysis());}
if(qn == "PTT") {fe->ana->addAlgorithm(new OccPixelThresholdTune());}
if(qn == "PPT") {fe->ana->addAlgorithm(new TotAnalysis());}
}
s->init();
ui->scanProgressBar->setValue(ui->scanProgressBar->value() + (int)(100.0/(7.0*N*M))); //1
s->preScan();
ui->scanProgressBar->setValue(ui->scanProgressBar->value() + (int)(100.0/(7.0*N*M))); //2
unsigned int numThreads = std::thread::hardware_concurrency();
//std::cout << "-> Starting " << numThreads << " processor Threads:" << std::endl;
std::vector<std::thread> procThreads;
for (unsigned i=0; i<numThreads; i++){
procThreads.push_back(std::thread(process, bk, &scanDone));
//std::cout << " -> Processor thread #" << i << " started!" << std::endl;
}
std::vector<std::thread> anaThreads;
//std::cout << "-> Starting histogrammer and analysis threads:" << std::endl;
if (fe->isActive()){
anaThreads.push_back(std::thread(analysis, fe->histogrammer, fe->ana, &processorDone));
//std::cout << " -> Analysis thread of Fe " << fe->getRxChannel() << std::endl;
}
s->run();
ui->scanProgressBar->setValue(ui->scanProgressBar->value() + (int)(100.0/(7.0*N*M))); //3
s->postScan();
ui->scanProgressBar->setValue(ui->scanProgressBar->value() + (int)(100.0/(7.0*N*M))); //4
scanDone = true;
for (unsigned i=0; i<numThreads; i++){
procThreads[i].join();
}
ui->scanProgressBar->setValue(ui->scanProgressBar->value() + (int)(100.0/(7.0*N*M))); //5
processorDone = true;
for(unsigned i=0; i<anaThreads.size(); i++){
anaThreads[i].join();
}
ui->scanProgressBar->setValue(ui->scanProgressBar->value() + (int)(100.0/(7.0*N*M))); //6
if(qn != "CS") {
delete s;
}
// fe->toFileBinary();
// fe->ana->plot("Scan_GUI");
//DEBUG begin [plotting]
//clear raw data
while(fe->clipDataFei4->size() != 0){
fe->clipDataFei4->popData();
}
//clear raw data
while(fe->clipHisto->size() != 0){
fe->clipHisto->popData();
}
while(fe->clipResult->size() != 0){
HistogramBase * showMe = fe->clipResult->popData();
//Add tab to plot tab widget
QCustomPlot * tabScanPlot = new QCustomPlot(ui->scanPlots_tabWidget); // X
QWidget * addToTabWidget = dynamic_cast<QWidget*>(tabScanPlot);
QString newTabName = qn + ' ' + ui->feTree->topLevelItem(j)->text(0);
ui->scanPlots_tabWidget->addTab(addToTabWidget, newTabName);
//Add plot to scan tree
QTreeWidgetItem * plotTreeItemP = new QTreeWidgetItem(plotTreeItemDS); // X
plotTreeItemP->setText(0, "Plot " + QString::number(plotTreeItemDS->childCount())
+ " (" + QString::fromStdString(showMe->getName()) + ")");
plotTreeItemDS->addChild(plotTreeItemP);
if(dynamic_cast<Histo2d*>(showMe) != nullptr){
Histo2d * myHist2d = dynamic_cast<Histo2d*>(showMe);
//Create plot
QCPColorMap * colorMap = new QCPColorMap(tabScanPlot->xAxis, tabScanPlot->yAxis);
QCPColorScale * colorScale = new QCPColorScale(tabScanPlot);
tabScanPlot->addPlottable(colorMap);
tabScanPlot->plotLayout()->insertRow(0);
tabScanPlot->plotLayout()->addElement(0, 0, new QCPPlotTitle(tabScanPlot, QString::fromStdString(myHist2d->getName())));
colorMap->setName(QString::fromStdString(myHist2d->getName()));
colorMap->data()->setSize(80, 336);
colorMap->data()->setRange(QCPRange(0, 80), QCPRange(0, 336));
colorMap->keyAxis()->setLabel(QString::fromStdString(myHist2d->getXaxisTitle()));
colorMap->valueAxis()->setLabel(QString::fromStdString(myHist2d->getYaxisTitle()));
for(int xCoord = 0; xCoord<80; xCoord++){
for(int yCoord = 0; yCoord<336; yCoord++){
double colVal = myHist2d->getBin(yCoord + 336*xCoord); //TODO make better
colorMap->data()->setCell(xCoord, yCoord, colVal);
}
}
tabScanPlot->plotLayout()->addElement(1, 1, colorScale);
colorScale->setType(QCPAxis::atRight);
colorMap->setColorScale(colorScale);
colorScale->axis()->setLabel(QString::fromStdString(myHist2d->getZaxisTitle()));
colorMap->setGradient(QCPColorGradient::gpPolar);
colorMap->rescaleDataRange();
}else if(dynamic_cast<Histo1d*>(showMe) != nullptr){
Histo1d * myHist1d = dynamic_cast<Histo1d*>(showMe);
QCPBars * myBars = new QCPBars(tabScanPlot->xAxis, tabScanPlot->yAxis);
tabScanPlot->addPlottable(myBars);
myBars->setName(QString::fromStdString(myHist1d->getName()));
for(unsigned int i = 0; i < myHist1d->size(); i++) {
myBars->addData((double)(i+1), myHist1d->getBin(i));
}
myBars->rescaleAxes();
tabScanPlot->plotLayout()->insertRow(0);
tabScanPlot->plotLayout()->addElement(0, 0, new QCPPlotTitle(tabScanPlot, QString::fromStdString(myHist1d->getName())));
myBars->keyAxis()->setLabel(QString::fromStdString(myHist1d->getXaxisTitle()));
myBars->valueAxis()->setLabel(QString::fromStdString(myHist1d->getYaxisTitle()));
}else{
std::cerr << "Correct plot type not found or severe cast error\n"; //DEBUG
return;
}
tabScanPlot->rescaleAxes();
tabScanPlot->replot();
}
ui->scanProgressBar->setValue(ui->scanProgressBar->value() + (int)(100.0/(7.0*N*M))); //7
delete fe->histogrammer;
fe->histogrammer = nullptr;
delete fe->ana;
fe->ana = nullptr;
}
std::cout.rdbuf(coutBuf);
std::cerr.rdbuf(cerrBuf);
tmpOfCout->close();
tmpOfCerr->close();
std::ifstream tmpInCout("deleteMeCout.txt");
std::ifstream tmpInCerr("deleteMeCerr.txt");
std::cout << tmpInCout.rdbuf();
std::cerr << tmpInCerr.rdbuf();
tmpInCout.close();
tmpInCerr.close();
return;
}
