Esempi in C++ (Cpp) per RegionTable::GetEnd

Esempio n. 1

File: RegionUtils.cpp Progetto: outpaddling/blasr_libcpp

// General functions.
bool LookupHQRegion(int holeNumber, RegionTable &regionTable, 
    int &start, int &end, int &score) {

	int regionLowIndex, regionHighIndex;
	regionLowIndex = regionHighIndex = 0;

	regionTable.LookupRegionsByHoleNumber(holeNumber,
        regionLowIndex, regionHighIndex);

	bool readHasGoodRegion = true;
	int  regionIndex = regionLowIndex;
	while (regionIndex < regionHighIndex and 
		   regionTable.GetType(regionIndex) != HQRegion) {
		regionIndex++;
	}
	
	if (regionIndex == regionHighIndex) {
    start = end = score = 0;
		return false;
	}
	else {
		start = regionTable.GetStart(regionIndex);
		end   = regionTable.GetEnd(regionIndex);
        score = regionTable.GetScore(regionIndex);
		return true;
	}
}