END_TEST
START_TEST (test_comp_fileresolver_resolve_3)
{
string filename(TestDataDirectory);
SBMLFileResolver fr;
SBMLDocument* doc2 = fr.resolve("enzyme_model.xml", filename);
fail_unless(doc2 != NULL);
fail_unless(doc2->getModel() != NULL);
}
END_TEST
START_TEST (test_comp_fileresolver_resolve_5)
{
SBMLFileResolver fr;
string name("chrome://anything/enzyme_model.xml");
string name1("http://anything/enzyme_model.xml");
SBMLDocument* doc2 = fr.resolve(name, name1);
// this passes because we have inadvertently used
// the file nam at the end of the uri
fail_unless(doc2 == NULL);
}
int
CompFlatteningConverter::convert()
{
// need to keep track so we can delete it later;
int basePathResolverIndex = -1;
// need to set the base path if we have the option
if (getProperties() != NULL && getProperties()->hasOption("basePath"))
{
string basePath = getProperties()->getValue("basePath");
if(basePath != ".")
{
// temporarily add a new resolver with the new basePath
SBMLFileResolver basePathResolver;
basePathResolver.addAdditionalDir(basePath);
basePathResolverIndex =
SBMLResolverRegistry::getInstance().getNumResolvers();
SBMLResolverRegistry::getInstance().addResolver(&basePathResolver);
}
}
// remember number of registered callbacks
int numRegisteredCallbacks = Submodel::getNumProcessingCallbacks();
int result = performConversion();
if (basePathResolverIndex != -1)
{
// if we added a resolver remove it
SBMLResolverRegistry::getInstance().removeResolver(basePathResolverIndex);
}
// remove all registered callbacks
for (int index = Submodel::getNumProcessingCallbacks()-1; index >= numRegisteredCallbacks; --index)
{
Submodel::removeProcessingCallback(index);
}
// clean up PkgsToStrip
if (mPkgsToStrip != NULL)
{
mPkgsToStrip->clear();
delete mPkgsToStrip;
mPkgsToStrip = NULL;
}
return result;
}
END_TEST
START_TEST (test_comp_fileresolver_resolve)
{
string filename(TestDataDirectory);
filename += "complexified.xml";
SBMLDocument* doc = readSBMLFromFile(filename.c_str());
fail_unless(doc->getLocationURI() == "file:" + filename);
SBMLFileResolver fr;
SBMLDocument* doc2 = fr.resolve("enzyme_model.xml", doc->getLocationURI());
fail_unless(doc2 != NULL);
fail_unless(doc2->getModel() != NULL);
}
END_TEST
START_TEST (test_comp_fileresolver_resolve_6)
{
string filename(TestDataDirectory);
size_t pos = filename.rfind('/');
if (pos != filename.npos)
{
filename = filename.substr(0, pos);
}
SBMLFileResolver fr;
SBMLDocument* doc2 = fr.resolve("enzyme_model.xml", filename);
fail_unless(doc2 != NULL);
fail_unless(doc2->getModel() != NULL);
delete doc2;
}
END_TEST
START_TEST (test_comp_fileresolver_resolve_4)
{
string filename(TestDataDirectory);
filename += "complexified.xml";
SBMLDocument* doc = readSBMLFromFile(filename.c_str());
fail_unless(doc->getLocationURI() == "file:" + filename);
SBMLFileResolver fr;
string newDir(TestDataDirectory);
newDir += "/subdir";
fr.addAdditionalDir(newDir);
SBMLDocument* doc2 = fr.resolve("new_aggregate.xml", doc->getLocationURI());
fail_unless(doc2 != NULL);
fail_unless(doc2->getModel() != NULL);
}
END_TEST
START_TEST (test_comp_fileresolver_resolve_2)
{
string filename(TestDataDirectory);
filename += "complexified.xml";
SBMLDocument* doc = readSBMLFromFile(filename.c_str());
fail_unless(doc->getLocationURI() == "file:" + filename);
SBMLFileResolver fr;
string newFilename("chrome://anything/enzyme_model.xml");
SBMLDocument* doc2 = fr.resolve(newFilename, doc->getLocationURI());
// this passes because we have inadvertently used
// the file name at the end of the uri
fail_unless(doc2 != NULL);
fail_unless(doc2->getModel() != NULL);
}