void ctkEAScenario2EventConsumer::handleEvent(const ctkEvent& event)
{
QMutexLocker l(&mutex);
try
{
/* get the topic from the event*/
// QString eventTopic = event.getTopic();
//TODO security topic permission
// /* make a topic permission from the received topic in order to check it*/
// TopicPermission permissionAccuired = new TopicPermission(eventTopic, "SUBSCRIBE");
// /* make a topic permission from the topic to consume in order to check it*/
// TopicPermission actualPermission = new TopicPermission(topicsToConsume[0], "SUBSCRIBE");
// /* assert if the topic in the event is the same as the topic to listen fore including wildcard */
// assertTrue("The topics was not equal", actualPermission.implies(permissionAccuired));
/* try to get the message */
QString message = event.getProperty("Synchronous message").toString();
if(!message.isNull())
{
/* its a syncronous message */
qDebug() << "received a synchronous event with message:" << message;
/* assert that the messages of syncronous type are not too many */
QVERIFY2(synchMessages < numSyncMessages, "too many synchronous messages");
synchMessages++;
qDebug() << "Max number of Sync messages is:" << numSyncMessages << "and number of received Sync messages is: " << synchMessages;
}
else
{
message = event.getProperty("Asynchronous message").toString();
if(!message.isNull())
{
qDebug() << "received an asynchronous event with message:" << message;
/* assert that the messsage of the asyncronous type are not too many */
QVERIFY2(asynchMessages < numAsyncMessages, "too many asynchronous messages");
asynchMessages++;
qDebug() << "Max number of Async messages is:" << numAsyncMessages << "and number of received Async messages is:" << asynchMessages;
}
}
}
catch (const ctkRuntimeException& e)
{
error = true;
exc = e;
throw e;
}
catch (...)
{
error = true;
}
}
//----------------------------------------------------------------------------
void ctkEAScenario3EventConsumer::handleEvent(const ctkEvent& event)
{
QMutexLocker l(&mutex);
try
{
/* try to get the message */
QString message = event.getProperty("Synchronous message").toString();
if (!message.isNull())
{
/* its an asyncronous message */
synchMessages++;
qDebug() << "recived a Synchronous event with message:" << message;
}
else
{
message = event.getProperty("Asynchronous message").toString();
if (!message.isNull())
{
asynchMessages++;
qDebug() << "recived an Asynchronus event with message:" << message;
}
}
/* assert that the messages property is not null */
QVERIFY2(!message.isNull(), "Message should not be null in handleEvent()");
/* assert that the messages of syncronous type are not too many */
QVERIFY2(synchMessages < numSyncMessages + 1, "too many synchronous messages");
/* assert that the messsage of the asyncronous type are not too many */
QVERIFY2(asynchMessages < numAsyncMessages + 1, "too many asynchronous messages");
}
catch (const ctkRuntimeException& e)
{
error = true;
exc = e;
throw e;
}
catch (...)
{
error = true;
}
}
void DicomEventHandler::OnSignalAddSeriesToDataManager(const ctkEvent& ctkEvent)
{
QStringList listOfFilesForSeries;
mitk::DicomSeriesReader::StringContainer seriesToLoad;
listOfFilesForSeries = ctkEvent.getProperty("FilesForSeries").toStringList();
if (!listOfFilesForSeries.isEmpty()){
QStringListIterator it(listOfFilesForSeries);
while (it.hasNext())
{
seriesToLoad.push_back(it.next().toStdString());
}
mitk::DataNode::Pointer node = mitk::DicomSeriesReader::LoadDicomSeries(seriesToLoad);
if (node.IsNull())
{
MITK_ERROR << "Error loading series: " << ctkEvent.getProperty("SeriesName").toString().toStdString()
<< " id: " <<ctkEvent.getProperty("SeriesUID").toString().toStdString();
}
else
{
//Get Reference for default data storage.
ctkServiceReference serviceReference =mitk::PluginActivator::getContext()->getServiceReference<mitk::IDataStorageService>();
mitk::IDataStorageService* storageService = mitk::PluginActivator::getContext()->getService<mitk::IDataStorageService>(serviceReference);
mitk::DataStorage* dataStorage = storageService->GetDefaultDataStorage().GetPointer()->GetDataStorage();
dataStorage->Add(node);
// Initialize the RenderWindow
mitk::TimeSlicedGeometry::Pointer geometry = dataStorage->ComputeBoundingGeometry3D(dataStorage->GetAll());
mitk::RenderingManager::GetInstance()->InitializeViews(geometry);
}
}
else
{
MITK_INFO << "There are no files for the current series";
}
}
void ctkEventBusImpl::dispatchEvent(const ctkEvent& event, bool isAsync)
{
QString topic = event.topic();
QSet<ctkEventHandlerWrapper*> eventHandlers = this->handlers(topic);
if (eventHandlers.empty()) return;
QSetIterator<ctkEventHandlerWrapper*> iter(eventHandlers);
while (iter.hasNext())
{
iter.next()->handleEvent(event);
}
}
void DicomEventHandler::OnSignalAddSeriesToDataManager(const ctkEvent& ctkEvent)
{
QStringList listOfFilesForSeries;
listOfFilesForSeries = ctkEvent.getProperty("FilesForSeries").toStringList();
if (!listOfFilesForSeries.isEmpty())
{
//for rt data, if the modality tag isn't defined or is "CT" the image is handled like before
if(ctkEvent.containsProperty("Modality") &&
(ctkEvent.getProperty("Modality").toString().compare("RTDOSE",Qt::CaseInsensitive) == 0 ||
ctkEvent.getProperty("Modality").toString().compare("RTSTRUCT",Qt::CaseInsensitive) == 0 ||
ctkEvent.getProperty("Modality").toString().compare("RTPLAN", Qt::CaseInsensitive) == 0))
{
QString modality = ctkEvent.getProperty("Modality").toString();
if(modality.compare("RTDOSE",Qt::CaseInsensitive) == 0)
{
auto doseReader = mitk::RTDoseReaderService();
doseReader.SetInput(listOfFilesForSeries.front().toStdString());
std::vector<itk::SmartPointer<mitk::BaseData> > readerOutput = doseReader.Read();
if (!readerOutput.empty()){
mitk::Image::Pointer doseImage = dynamic_cast<mitk::Image*>(readerOutput.at(0).GetPointer());
mitk::DataNode::Pointer doseImageNode = mitk::DataNode::New();
doseImageNode->SetData(doseImage);
doseImageNode->SetName("RTDose");
if (doseImage != nullptr)
{
auto sopUIDProperty = doseImage->GetProperty("dicomseriesreader.SOPClassUID");
if (sopUIDProperty.IsNotNull()){
auto sopUIDStringProperty = dynamic_cast<mitk::StringProperty*>(sopUIDProperty.GetPointer());
if (sopUIDStringProperty != nullptr){
std::string sopUID = sopUIDStringProperty->GetValue();
doseImageNode->SetName(sopUID);
}
}
berry::IPreferencesService* prefService = berry::Platform::GetPreferencesService();
berry::IPreferences::Pointer prefNode = prefService->GetSystemPreferences()->Node(mitk::RTUIConstants::ROOT_DOSE_VIS_PREFERENCE_NODE_ID.c_str());
if (prefNode.IsNull())
{
mitkThrow() << "Error in preference interface. Cannot find preset node under given name. Name: " << prefNode->ToString().toStdString();
}
//set some specific colorwash and isoline properties
bool showColorWashGlobal = prefNode->GetBool(mitk::RTUIConstants::GLOBAL_VISIBILITY_COLORWASH_ID.c_str(), true);
bool showIsolinesGlobal = prefNode->GetBool(mitk::RTUIConstants::GLOBAL_VISIBILITY_ISOLINES_ID.c_str(), true);
//Set reference dose property
double referenceDose = prefNode->GetDouble(mitk::RTUIConstants::REFERENCE_DOSE_ID.c_str(), mitk::RTUIConstants::DEFAULT_REFERENCE_DOSE_VALUE);
mitk::ConfigureNodeAsDoseNode(doseImageNode, mitk::GeneratIsoLevels_Virtuos(), referenceDose, showColorWashGlobal);
ctkServiceReference serviceReference = mitk::PluginActivator::getContext()->getServiceReference<mitk::IDataStorageService>();
mitk::IDataStorageService* storageService = mitk::PluginActivator::getContext()->getService<mitk::IDataStorageService>(serviceReference);
mitk::DataStorage* dataStorage = storageService->GetDefaultDataStorage().GetPointer()->GetDataStorage();
dataStorage->Add(doseImageNode);
mitk::RenderingManager::GetInstance()->InitializeViewsByBoundingObjects(dataStorage);
}
}//END DOSE
}
else if(modality.compare("RTSTRUCT",Qt::CaseInsensitive) == 0)
{
auto structReader = mitk::RTStructureSetReaderService();
structReader.SetInput(listOfFilesForSeries.front().toStdString());
std::vector<itk::SmartPointer<mitk::BaseData> > readerOutput = structReader.Read();
if (readerOutput.empty()){
MITK_ERROR << "No structure sets were created" << endl;
}
else {
std::vector<mitk::DataNode::Pointer> modelVector;
ctkServiceReference serviceReference = mitk::PluginActivator::getContext()->getServiceReference<mitk::IDataStorageService>();
mitk::IDataStorageService* storageService = mitk::PluginActivator::getContext()->getService<mitk::IDataStorageService>(serviceReference);
mitk::DataStorage* dataStorage = storageService->GetDefaultDataStorage().GetPointer()->GetDataStorage();
for (const auto& aStruct : readerOutput){
mitk::ContourModelSet::Pointer countourModelSet = dynamic_cast<mitk::ContourModelSet*>(aStruct.GetPointer());
mitk::DataNode::Pointer structNode = mitk::DataNode::New();
structNode->SetData(countourModelSet);
structNode->SetProperty("name", aStruct->GetProperty("name"));
structNode->SetProperty("color", aStruct->GetProperty("contour.color"));
structNode->SetProperty("contour.color", aStruct->GetProperty("contour.color"));
structNode->SetProperty("includeInBoundingBox", mitk::BoolProperty::New(false));
structNode->SetVisibility(true, mitk::BaseRenderer::GetInstance(
mitk::BaseRenderer::GetRenderWindowByName("stdmulti.widget1")));
structNode->SetVisibility(false, mitk::BaseRenderer::GetInstance(
mitk::BaseRenderer::GetRenderWindowByName("stdmulti.widget2")));
structNode->SetVisibility(false, mitk::BaseRenderer::GetInstance(
mitk::BaseRenderer::GetRenderWindowByName("stdmulti.widget3")));
structNode->SetVisibility(true, mitk::BaseRenderer::GetInstance(
mitk::BaseRenderer::GetRenderWindowByName("stdmulti.widget4")));
dataStorage->Add(structNode);
}
mitk::RenderingManager::GetInstance()->InitializeViewsByBoundingObjects(dataStorage);
}
}
else if (modality.compare("RTPLAN", Qt::CaseInsensitive) == 0)
{
auto planReader = mitk::RTPlanReaderService();
planReader.SetInput(listOfFilesForSeries.front().toStdString());
std::vector<itk::SmartPointer<mitk::BaseData> > readerOutput = planReader.Read();
if (!readerOutput.empty()){
//there is no image, only the properties are interesting
mitk::Image::Pointer planDummyImage = dynamic_cast<mitk::Image*>(readerOutput.at(0).GetPointer());
mitk::DataNode::Pointer planImageNode = mitk::DataNode::New();
planImageNode->SetData(planDummyImage);
planImageNode->SetName("RTPlan");
ctkServiceReference serviceReference = mitk::PluginActivator::getContext()->getServiceReference<mitk::IDataStorageService>();
mitk::IDataStorageService* storageService = mitk::PluginActivator::getContext()->getService<mitk::IDataStorageService>(serviceReference);
mitk::DataStorage* dataStorage = storageService->GetDefaultDataStorage().GetPointer()->GetDataStorage();
dataStorage->Add(planImageNode);
}
}
}
else
{
mitk::StringList seriesToLoad;
QStringListIterator it(listOfFilesForSeries);
while (it.hasNext())
{
seriesToLoad.push_back(it.next().toStdString());
}
//Get Reference for default data storage.
ctkServiceReference serviceReference = mitk::PluginActivator::getContext()->getServiceReference<mitk::IDataStorageService>();
mitk::IDataStorageService* storageService = mitk::PluginActivator::getContext()->getService<mitk::IDataStorageService>(serviceReference);
mitk::DataStorage* dataStorage = storageService->GetDefaultDataStorage().GetPointer()->GetDataStorage();
std::vector<mitk::BaseData::Pointer> baseDatas = mitk::IOUtil::Load(seriesToLoad.front());
for (const auto &data : baseDatas)
{
mitk::DataNode::Pointer node = mitk::DataNode::New();
node->SetData(data);
std::string nodeName = "Unnamed Dicom";
std::string studyUID = "";
std::string seriesUID = "";
data->GetPropertyList()->GetStringProperty("DICOM.0020.000D", studyUID);
data->GetPropertyList()->GetStringProperty("DICOM.0020.000E", seriesUID);
if (!studyUID.empty())
{
nodeName = studyUID;
}
if (!seriesUID.empty())
{
if (!studyUID.empty())
{
nodeName += "/";
}
nodeName += seriesUID;
}
dataStorage->Add(node);
}
}
}
else
{
MITK_INFO << "There are no files for the current series";
}
}
