void OpenSwathHelper::selectSwathTransitions(const OpenMS::TargetedExperiment& targeted_exp,
OpenMS::TargetedExperiment& transition_exp_used, double min_upper_edge_dist,
double lower, double upper)
{
transition_exp_used.setPeptides(targeted_exp.getPeptides());
transition_exp_used.setProteins(targeted_exp.getProteins());
for (Size i = 0; i < targeted_exp.getTransitions().size(); i++)
{
ReactionMonitoringTransition tr = targeted_exp.getTransitions()[i];
if (lower < tr.getPrecursorMZ() && tr.getPrecursorMZ() < upper &&
std::fabs(upper - tr.getPrecursorMZ()) >= min_upper_edge_dist)
{
transition_exp_used.addTransition(tr);
}
}
}
