void _RSGenerator_AssignFromXML( void* meshGenerator, Stg_ComponentFactory* cf, void* data )
{
RSGenerator* self = (RSGenerator*)meshGenerator;
FiniteElementContext* context = Stg_ComponentFactory_ConstructByName( cf, (Name)"context", FiniteElementContext, True, NULL );
Dictionary* dict = Dictionary_Entry_Value_AsDictionary( Dictionary_Get( cf->componentDict, (Dictionary_Entry_Key)self->name ) );
Dictionary_Entry_Value *minList, *maxList, *tmp;
char* rootKey;
unsigned d_i;
double maxVal;
_CartesianGenerator_AssignFromXML( meshGenerator, cf, data );
// mesh min/max coords are written to file from the mesh->min/maxGlobalCoord field. these differ from the min/max
// coords as defined in the RSGenerator->min/maxCrd (these are in r-theta-phi, not x-y-z), so if we're restarting
// we need to over-ride the coords from the hdf5 mesh file with those from the xml (assuming they don't differ
// between runs...
if( self->nDims > 2 ) {
if( context->loadFromCheckPoint ) {
minList = Dictionary_Get( dict, (Dictionary_Entry_Key)"minCoord" );
maxList = Dictionary_Get( dict, (Dictionary_Entry_Key)"maxCoord" );
if( minList && maxList ) {
assert( Dictionary_Entry_Value_GetCount( minList ) >= self->nDims );
assert( Dictionary_Entry_Value_GetCount( maxList ) >= self->nDims );
for( d_i = 0; d_i < self->nDims; d_i++ ) {
tmp = Dictionary_Entry_Value_GetElement( minList, d_i );
rootKey = Dictionary_Entry_Value_AsString( tmp );
if( !Stg_StringIsNumeric( (char*)rootKey ) )
tmp = Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)rootKey );
self->crdMin[d_i] = Dictionary_Entry_Value_AsDouble( tmp );
tmp = Dictionary_Entry_Value_GetElement( maxList, d_i );
rootKey = Dictionary_Entry_Value_AsString( tmp );
if( !Stg_StringIsNumeric( (char*)rootKey ) )
tmp = Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)rootKey );
self->crdMax[d_i] = Dictionary_Entry_Value_AsDouble( tmp );
/* test to ensure provided domain is valid */
maxVal = (abs(self->crdMax[d_i]) > abs(self->crdMin[d_i])) ? abs(self->crdMax[d_i]) : abs(self->crdMin[d_i]);
if( maxVal == 0 ) maxVal = 1; /* if maxVal is zero, then both numbers must be zero, set to one as next test will fail */
Journal_Firewall( ( ( (self->crdMax[d_i] - self->crdMin[d_i])/maxVal) > 1E-10 || d_i==J_AXIS), global_error_stream,
"\n\nError in %s for %s '%s'\n\n"
"Dimension of domain (min = %f, max = %f) for component number %u is not valid.\n\n",
__func__, self->type, self->name, self->crdMin[d_i], self->crdMax[d_i], d_i );
}
}
}
// phi = (pi/2, pi)
Journal_Firewall( !(fabs(self->crdMin[2] -self->crdMax[2])>=179.99 || self->crdMax[2] < self->crdMin[2]),
global_error_stream, "\nError in %s: Phi definition is wrong. Ensure minZ < maxZ & abs(minZ-maxZ)<180\n", __func__);
}
Journal_Firewall( self->nDims==3, global_error_stream,
"Error in %s: Must have 3 dimensions for component %s\n", __func__, self->name );
// check domain size is valid
Journal_Firewall( !(self->crdMin[0] <= 0 || self->crdMax[0] < self->crdMin[0]), global_error_stream,
"Error in %s: Radius definition is wrong. Ensure maxX > minX & minX > 0\n", __func__ );
Journal_Firewall(!( fabs(self->crdMin[1]-self->crdMax[1]) >= 179.99 || self->crdMax[1] < self->crdMin[1] ),
global_error_stream, "Error in %s: Theta definition is wrong. Ensure minY < maxY && abs(minY-maxY) < 180\n", __func__ );
}
void _Ppc_Switch_AssignFromXML( void* _self, Stg_ComponentFactory* cf, void* data ) {
Ppc_Switch* self = (Ppc_Switch*)_self;
Dictionary* theDictionary = NULL;
Dictionary_Entry_Value* caseEntry = NULL;
Dictionary_Entry_Value* tagList = NULL;
Index case_I;
char* ppcName;
/* Construct parent */
_Ppc_AssignFromXML( self, cf, data );
/* The dictionary */
theDictionary = Dictionary_Entry_Value_AsDictionary( Dictionary_Get( cf->componentDict, (Dictionary_Entry_Key)self->name ) );
/* Read the properties list */
tagList = Dictionary_Get( theDictionary, (Dictionary_Entry_Key)"CaseList" );
assert( tagList );
self->caseCount = Dictionary_Entry_Value_GetCount( tagList );
self->caseList = Memory_Alloc_Array( Ppc_Switch_Case, self->caseCount, "Ppc_Switch_caseList" );
for( case_I = 0; case_I < self->caseCount; case_I++ ){
caseEntry = Dictionary_Entry_Value_GetElement( tagList, case_I );
/* get case value */
self->caseList[case_I].constant = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( caseEntry, (Dictionary_Entry_Key)"Case") );
/* get ppc associated with the case*/
ppcName = Dictionary_Entry_Value_AsString( Dictionary_Entry_Value_GetMember( caseEntry, (Dictionary_Entry_Key)"Value") );
self->caseList[case_I].valueTag = PpcManager_GetPpcByName( self->manager, cf, (Name)ppcName );
}
/* Init */
_Ppc_Switch_Init(
self,
Stg_ComponentFactory_GetString( cf, self->name, (Dictionary_Entry_Key)"Interpolate", "" ),
PpcManager_GetPpcFromDict( self->manager, cf, self->name, (Dictionary_Entry_Key)"Field", "" ) );
}
void _RefinedRegionsGeometry_Init( RefinedRegionsGeometry* self, IJK size ) {
Dimension_Index dim_I;
Dictionary_Entry_Value* regionsList = NULL;
/* General and Virtual info should already be set */
/* RefinedRegionsGeometry info */
self->isConstructed = False;
self->min[ I_AXIS ] = Dictionary_GetDouble_WithDefault( self->dictionary, "minX", 0.0f );
self->min[ J_AXIS ] = Dictionary_GetDouble_WithDefault( self->dictionary, "minY", 0.0f );
self->min[ K_AXIS ] = Dictionary_GetDouble_WithDefault( self->dictionary, "minZ", 0.0f );
self->max[ I_AXIS ] = Dictionary_GetDouble_WithDefault( self->dictionary, "maxX", 1.0f );
self->max[ J_AXIS ] = Dictionary_GetDouble_WithDefault( self->dictionary, "maxY", 1.0f );
self->max[ K_AXIS ] = Dictionary_GetDouble_WithDefault( self->dictionary, "maxZ", 1.0f );
if ( size ) {
memcpy( self->countPerDim, size, sizeof(IJK) );
}
else {
self->countPerDim[ I_AXIS ] = Dictionary_GetUnsignedInt_WithDefault( self->dictionary, "meshSizeI", 2 );
self->countPerDim[ J_AXIS ] = Dictionary_GetUnsignedInt_WithDefault( self->dictionary, "meshSizeJ", 2 );
self->countPerDim[ K_AXIS ] = Dictionary_GetUnsignedInt_WithDefault( self->dictionary, "meshSizeK", 2 );
}
for ( dim_I = 0; dim_I < 3; dim_I++ ) {
self->refinedRegionDeltas[dim_I] = 4;
}
/* Now Read in the refined regions */
regionsList = Dictionary_Get( self->dictionary, "RefinedRegions" );
if ( regionsList ) {
Index entryCount = Dictionary_Entry_Value_GetCount( regionsList );
Index entry_I = 0;
Dictionary_Entry_Value* regionEntry;
Dictionary* regionDict;
Dimension_Index dim = 0;
double regionStart = 0;
double regionEnd = 0;
unsigned int refinementFactor = 1;
for( entry_I = 0; entry_I < entryCount; entry_I++ ) {
regionEntry = Dictionary_Entry_Value_GetElement( regionsList, entry_I );
regionDict = Dictionary_Entry_Value_AsDictionary( regionEntry );
dim = Dictionary_GetUnsignedInt_WithDefault( regionDict, "dim", 0 );
regionStart = Dictionary_GetDouble_WithDefault( regionDict, "regionStart", 0.0 );
regionEnd = Dictionary_GetDouble_WithDefault( regionDict, "regionEnd", 1.0 );
refinementFactor = Dictionary_GetUnsignedInt_WithDefault( regionDict, "refinementFactor", 2 );
_RefinedRegionsGeometry_AddRefinedRegion( self, dim, regionStart, regionEnd, refinementFactor );
}
}
self->pointCount = self->countPerDim[I_AXIS] * self->countPerDim[J_AXIS] *
self->countPerDim[K_AXIS];
assert( self->pointCount );
}
Stg_Component* _Stg_ComponentFactory_PluginConstructByKey(
void* cf,
void* codelet,
Dictionary_Entry_Key componentKey,
Type type,
Bool isEssential,
void* data )
{
Stg_ComponentFactory* self = (Stg_ComponentFactory*)cf;
Stg_Component* plugin = (Stg_Component*)codelet;
Dictionary* thisPluginDict = NULL;
Dictionary* pluginDict = (Dictionary*)Dictionary_Get( self->rootDict, "plugins" );
Name componentName, redirect, pluginType;
Dictionary_Entry_Value* componentEntryVal;
Index pluginIndex;
Stream* errorStream = Journal_Register( Error_Type, self->type );
Journal_Firewall( self != NULL, errorStream, "In func %s: Stg_Component is NULL.\n", __func__ );
/* Get this plugins Dictionary */
for( pluginIndex = 0; pluginIndex < Dictionary_Entry_Value_GetCount( (Dictionary_Entry_Value*)pluginDict ); pluginIndex++ ) {
thisPluginDict = Dictionary_Entry_Value_AsDictionary( Dictionary_Entry_Value_GetElement( (Dictionary_Entry_Value*)pluginDict, pluginIndex ) );
pluginType = StG_Strdup( Dictionary_GetString( thisPluginDict, "Type" ) );
if( !strcmp( plugin->type, pluginType ) ){
Memory_Free( pluginType );
break;
}
Memory_Free( pluginType );
}
/* Get Dependency's Name */
componentEntryVal = Dictionary_Get( thisPluginDict, componentKey );
if ( componentEntryVal == NULL ) {
Journal_Firewall( !isEssential, errorStream,
"plugin '%s' cannot find essential component with key '%s'.\n", plugin->type, componentKey );
Journal_PrintfL( self->infoStream, 2, "plugin '%s' cannot find non-essential component with key '%s'.\n", plugin->type, componentKey );
return NULL;
}
componentName = Dictionary_Entry_Value_AsString( componentEntryVal );
/* If we can find the component's name in the root dictionary, use that value instead. */
if( self->rootDict ) {
redirect = Dictionary_GetString_WithDefault( self->rootDict, componentName, "" );
if( strcmp( redirect, "" ) )
componentName = redirect;
}
return self->constructByName( self, componentName, type, isEssential, data );
}
void _SurfaceAdaptor_Construct( void* adaptor, Stg_ComponentFactory* cf, void* data ) {
SurfaceAdaptor* self = (SurfaceAdaptor*)adaptor;
Dictionary* dict;
char* surfaceType;
assert( self );
assert( cf );
/* Call parent construct. */
_MeshAdaptor_Construct( self, cf, data );
/* Rip out the components structure as a dictionary. */
dict = Dictionary_Entry_Value_AsDictionary( Dictionary_Get( cf->componentDict, self->name ) );
/* What kind of surface do we want? */
surfaceType = Stg_ComponentFactory_GetString( cf, self->name, "surfaceType", "" );
if( !strcmp( surfaceType, "wedge" ) ) {
self->surfaceType = SurfaceAdaptor_SurfaceType_Wedge;
self->info.wedge.offs = Stg_ComponentFactory_GetDouble( cf, self->name, "offset", 0.0 );
self->info.wedge.grad = Stg_ComponentFactory_GetDouble( cf, self->name, "gradient", 0.5 );
}
else if( !strcmp( surfaceType, "sine" ) || !strcmp( surfaceType, "cosine" ) ) {
Dictionary_Entry_Value* originList;
if( !strcmp( surfaceType, "sine" ) )
self->surfaceType = SurfaceAdaptor_SurfaceType_Sine;
else
self->surfaceType = SurfaceAdaptor_SurfaceType_Cosine;
originList = Dictionary_Get( dict, "origin" );
if( originList ) {
unsigned nDims;
unsigned d_i;
nDims = Dictionary_Entry_Value_GetCount( originList );
for( d_i = 0; d_i < nDims; d_i++ ) {
Dictionary_Entry_Value* val;
val = Dictionary_Entry_Value_GetElement( originList, d_i );
self->info.trig.origin[d_i] = Dictionary_Entry_Value_AsDouble( val );
}
}
else
memset( self->info.trig.origin, 0, sizeof(double) * 2 );
self->info.trig.amp = Stg_ComponentFactory_GetDouble( cf, self->name, "amplitude", 1.0 );
self->info.trig.freq = Stg_ComponentFactory_GetDouble( cf, self->name, "frequency", 1.0 );
}
else
_SurfaceAdaptor_Init( self );
}
void _PeriodicBoundariesManager_Build( void* periodicBCsManager, void* data ) {
PeriodicBoundariesManager* self = (PeriodicBoundariesManager*)periodicBCsManager;
Dictionary_Entry_Value* periodicBCsList = NULL;
Stg_Component_Build( self->swarm, data, False );
Stg_Component_Build( self->mesh, data, False );
self->size = 4;
self->boundaries = Memory_Alloc_Array( PeriodicBoundary, self->size, "PeriodicBoundariesManager->boundaries" );
if ( self->dictionary ) {
periodicBCsList = Dictionary_Get( self->dictionary, (Dictionary_Entry_Key)"PeriodicBoundaries" );
/* Dictionary entry is optional - users may prefer to enter in code */
if ( periodicBCsList ) {
Index numPeriodicBCs = 0;
Index periodicBC_I = 0;
Dictionary_Entry_Value* periodicBC = NULL;
char* perBCAxis = NULL;
numPeriodicBCs = Dictionary_Entry_Value_GetCount( periodicBCsList );
for ( periodicBC_I = 0; periodicBC_I < numPeriodicBCs; periodicBC_I++ ) {
periodicBC = Dictionary_Entry_Value_GetElement( periodicBCsList, periodicBC_I );
perBCAxis = Dictionary_Entry_Value_AsString( periodicBC );
if ( 0 == strcmp( perBCAxis, "I_AXIS" ) ) {
PeriodicBoundariesManager_AddPeriodicBoundary( self, I_AXIS );
}
else if ( 0 == strcmp( perBCAxis, "J_AXIS" ) ) {
PeriodicBoundariesManager_AddPeriodicBoundary( self, J_AXIS );
}
else if ( 0 == strcmp( perBCAxis, "K_AXIS" ) ) {
PeriodicBoundariesManager_AddPeriodicBoundary( self, K_AXIS );
}
}
}
}
/* Test if mesh is periodic */
else if ( Stg_Class_IsInstance( self->mesh->generator, CartesianGenerator_Type ) ) {
CartesianGenerator* cartesianGenerator = (CartesianGenerator*) self->mesh->generator;
Dimension_Index dim_I;
for ( dim_I = 0 ; dim_I < self->swarm->dim ; dim_I++ ) {
/* Add boundaries straight from mesh generator */
if ( cartesianGenerator->periodic[ dim_I ] )
PeriodicBoundariesManager_AddPeriodicBoundary( self, dim_I );
}
}
}
void _ConvexHull_AssignFromXML( void* convexHull, Stg_ComponentFactory* cf, void* data ) {
ConvexHull* self = (ConvexHull*)convexHull;
Index vertexCount;
Index vertex_I;
Coord_List vertexList;
double* coord;
Dictionary_Entry_Value* optionSet;
Dictionary_Entry_Value* optionsList;
Dictionary* dictionary = Dictionary_GetDictionary( cf->componentDict, self->name );
Stream* stream = cf->infoStream;
_Stg_Shape_AssignFromXML( self, cf, data );
optionsList = Dictionary_Get( dictionary, (Dictionary_Entry_Key)"vertices" );
Journal_Firewall( optionsList != NULL,
Journal_Register( Error_Type, (Name)self->type ),
"In func %s: The list 'vertices' specifying the convexHull is NULL.\n", __func__);
vertexCount = Dictionary_Entry_Value_GetCount(optionsList);
Journal_Firewall( ( self->dim == 2 && vertexCount < 4 ) || ( self->dim == 3 && vertexCount < 5 ),
Journal_Register( Error_Type, (Name)self->type ),
"In func %s: Sorry, but we got lazy, you can only specify 3 (2D) or 4 (3D) points. "
"Please feel free to hassle developers for this feature.\n", __func__);
/* Allocate space */
vertexList = Memory_Alloc_Array( Coord , vertexCount, "Vertex Array" );
memset( vertexList, 0, vertexCount * sizeof(Coord) );
Stream_Indent( stream );
for ( vertex_I = 0 ; vertex_I < vertexCount ; vertex_I++) {
optionSet = Dictionary_Entry_Value_GetElement(optionsList, vertex_I );
coord = vertexList[vertex_I];
/* Read Vertex */
coord[ I_AXIS ] = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"x") );
coord[ J_AXIS ] = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"y") );
coord[ K_AXIS ] = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"z"));
optionSet = optionSet->next;
}
Stream_UnIndent( stream );
_ConvexHull_Init( self, vertexList, vertexCount);
}
Dictionary* Codelet_GetPluginDictionary( void* codelet, Dictionary* rootDict ) {
Codelet* self = (Codelet*)codelet;
Dictionary_Entry_Value* pluginsDEV = Dictionary_Get( rootDict, "plugins" );
Dictionary* pluginDict;
unsigned pluginIndex;
Name pluginType;
for( pluginIndex = 0; pluginIndex < Dictionary_Entry_Value_GetCount( pluginsDEV ); pluginIndex++ ) {
pluginDict = Dictionary_Entry_Value_AsDictionary(
Dictionary_Entry_Value_GetElement( pluginsDEV, pluginIndex ) );
pluginType = Dictionary_GetString( pluginDict, "Type" );
if( !strcmp( self->type, pluginType ) )
return pluginDict;
}
return NULL;
}
void _ManualParticleLayout_InitialiseParticle(
void* manualParticleLayout,
void* _swarm,
Particle_Index newParticle_I,
void* _particle )
{
ManualParticleLayout* self = (ManualParticleLayout*)manualParticleLayout;
Dictionary_Entry_Value* manualParticlePositions = NULL;
Dictionary_Entry_Value* particlePositionEntry = NULL;
Dictionary* particlePositionDict = NULL;
GlobalParticle* particle = (GlobalParticle*)_particle;
manualParticlePositions = Dictionary_Get( self->dictionary, (Dictionary_Entry_Key)"manualParticlePositions" );
particlePositionEntry = Dictionary_Entry_Value_GetElement( manualParticlePositions, newParticle_I );
particlePositionDict = Dictionary_Entry_Value_AsDictionary( particlePositionEntry );
particle->coord[I_AXIS] = Dictionary_GetDouble_WithDefault( particlePositionDict, (Dictionary_Entry_Key)"x", 0.0 );
particle->coord[J_AXIS] = Dictionary_GetDouble_WithDefault( particlePositionDict, (Dictionary_Entry_Key)"y", 0.0 );
particle->coord[K_AXIS] = Dictionary_GetDouble_WithDefault( particlePositionDict, (Dictionary_Entry_Key)"z", 0.0 );
}
void _MeshGenerator_Construct( void* meshGenerator, Stg_ComponentFactory* cf, void* data ) {
MeshGenerator* self = (MeshGenerator*)meshGenerator;
Dictionary* dict;
Dictionary_Entry_Value* meshList;
Mesh* mesh;
assert( self );
assert( cf );
/* Rip out the components structure as a dictionary. */
dict = Dictionary_Entry_Value_AsDictionary( Dictionary_Get( cf->componentDict, self->name ) );
/* Set the communicator to a default. */
MeshGenerator_SetComm( self, MPI_COMM_WORLD );
/* Read the individual mesh if specified. */
mesh = Stg_ComponentFactory_ConstructByKey( cf, self->name, "mesh", Mesh, False, data );
if( mesh )
MeshGenerator_AddMesh( self, mesh );
/* Read the mesh list, if it's there. */
meshList = Dictionary_Get( dict, "meshes" );
if( meshList ) {
unsigned nMeshes;
char* name;
unsigned m_i;
nMeshes = Dictionary_Entry_Value_GetCount( meshList );
for( m_i = 0; m_i < nMeshes; m_i++ ) {
Mesh* mesh;
name = Dictionary_Entry_Value_AsString( Dictionary_Entry_Value_GetElement( meshList, m_i ) );
mesh = Stg_ComponentFactory_ConstructByName( cf, name, Mesh, True, data );
MeshGenerator_AddMesh( self, mesh );
}
}
/* Add to live component register. */
LiveComponentRegister_Add( cf->LCRegister, (Stg_Component*)self );
}
Dictionary_Entry_Value* Dictionary_Entry_Value_GetFirstElement( Dictionary_Entry_Value* self )
{
return Dictionary_Entry_Value_GetElement( self, 0 );
}
void _FrictionVC_ReadDictionary( void* variableCondition, void* dictionary ) {
FrictionVC* self = (FrictionVC*)variableCondition;
Dictionary_Entry_Value* vcDictVal;
Dictionary_Entry_Value _vcDictVal;
Dictionary_Entry_Value* varsVal;
FrictionVC_Entry_Index entry_I;
/* Find dictionary entry */
if (self->_dictionaryEntryName)
vcDictVal = Dictionary_Get(dictionary, self->_dictionaryEntryName);
else
{
vcDictVal = &_vcDictVal;
Dictionary_Entry_Value_InitFromStruct(vcDictVal, dictionary);
}
if (vcDictVal)
{
char* wallStr;
/* Obtain which wall */
wallStr = Dictionary_Entry_Value_AsString(Dictionary_Entry_Value_GetMember(vcDictVal, "wall" ));
if (!strcasecmp(wallStr, "back"))
self->_wall = FrictionVC_Wall_Back;
else if (!strcasecmp(wallStr, "left"))
self->_wall = FrictionVC_Wall_Left;
else if (!strcasecmp(wallStr, "bottom"))
self->_wall = FrictionVC_Wall_Bottom;
else if (!strcasecmp(wallStr, "right"))
self->_wall = FrictionVC_Wall_Right;
else if (!strcasecmp(wallStr, "top"))
self->_wall = FrictionVC_Wall_Top;
else if (!strcasecmp(wallStr, "front"))
self->_wall = FrictionVC_Wall_Front;
else {
assert( 0 );
self->_wall = FrictionVC_Wall_Size; /* invalid entry */
}
/* Obtain the variable entries */
self->_entryCount = 0;
self->_entryCount = Dictionary_Entry_Value_GetCount(Dictionary_Entry_Value_GetMember(vcDictVal, "variables"));
self->_entryTbl = Memory_Alloc_Array( FrictionVC_Entry, self->_entryCount, "FrictionVC->_entryTbl" );
varsVal = Dictionary_Entry_Value_GetMember(vcDictVal, "variables");
for (entry_I = 0; entry_I < self->_entryCount; entry_I++)
{
char* valType;
Dictionary_Entry_Value* valueEntry;
Dictionary_Entry_Value* varDictListVal;
varDictListVal = Dictionary_Entry_Value_GetElement(varsVal, entry_I);
valueEntry = Dictionary_Entry_Value_GetMember(varDictListVal, "value");
self->_entryTbl[entry_I].varName = Dictionary_Entry_Value_AsString(
Dictionary_Entry_Value_GetMember(varDictListVal, "name"));
valType = Dictionary_Entry_Value_AsString(Dictionary_Entry_Value_GetMember(varDictListVal, "type"));
if (0 == strcasecmp(valType, "func"))
{
char* funcName = Dictionary_Entry_Value_AsString(valueEntry);
Index cfIndex;
self->_entryTbl[entry_I].value.type = VC_ValueType_CFIndex;
cfIndex = ConditionFunction_Register_GetIndex( self->conFunc_Register, funcName);
if ( cfIndex == (unsigned)-1 ) {
Stream* errorStr = Journal_Register( Error_Type, self->type );
Journal_Printf( errorStr, "Error- in %s: While parsing "
"definition of wallVC \"%s\" (applies to wall \"%s\"), the cond. func. applied to "
"variable \"%s\" - \"%s\" - wasn't found in the c.f. register.\n",
__func__, self->_dictionaryEntryName, FrictionVC_WallEnumToStr[self->_wall],
self->_entryTbl[entry_I].varName, funcName );
Journal_Printf( errorStr, "(Available functions in the C.F. register are: ");
ConditionFunction_Register_PrintNameOfEachFunc( self->conFunc_Register, errorStr );
Journal_Printf( errorStr, ")\n");
assert(0);
}
self->_entryTbl[entry_I].value.as.typeCFIndex = cfIndex;
}
else if (0 == strcasecmp(valType, "array"))
{
Dictionary_Entry_Value* valueElement;
Index i;
self->_entryTbl[entry_I].value.type = VC_ValueType_DoubleArray;
self->_entryTbl[entry_I].value.as.typeArray.size = Dictionary_Entry_Value_GetCount(valueEntry);
self->_entryTbl[entry_I].value.as.typeArray.array = Memory_Alloc_Array( double,
self->_entryTbl[entry_I].value.as.typeArray.size, "FrictionVC->_entryTbl[].value.as.typeArray.array" );
for (i = 0; i < self->_entryTbl[entry_I].value.as.typeArray.size; i++)
{
valueElement = Dictionary_Entry_Value_GetElement(valueEntry, i);
self->_entryTbl[entry_I].value.as.typeArray.array[i] =
Dictionary_Entry_Value_AsDouble(valueElement);
}
}
else if( 0 == strcasecmp( valType, "double" ) || 0 == strcasecmp( valType, "d" ) ||
0 == strcasecmp( valType, "float" ) || 0 == strcasecmp( valType, "f" ) )
{
self->_entryTbl[entry_I].value.type = VC_ValueType_Double;
self->_entryTbl[entry_I].value.as.typeDouble = Dictionary_Entry_Value_AsDouble( valueEntry );
}
else if( 0 == strcasecmp( valType, "integer" ) || 0 == strcasecmp( valType, "int" ) || 0 == strcasecmp( valType, "i" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Int;
self->_entryTbl[entry_I].value.as.typeInt = Dictionary_Entry_Value_AsUnsignedInt( valueEntry );
}
else if( 0 == strcasecmp( valType, "short" ) || 0 == strcasecmp( valType, "s" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Short;
self->_entryTbl[entry_I].value.as.typeShort = Dictionary_Entry_Value_AsUnsignedInt( valueEntry );
}
else if( 0 == strcasecmp( valType, "char" ) || 0 == strcasecmp( valType, "c" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Char;
self->_entryTbl[entry_I].value.as.typeChar = Dictionary_Entry_Value_AsUnsignedInt( valueEntry );
}
else if( 0 == strcasecmp( valType, "pointer" ) || 0 == strcasecmp( valType, "ptr" ) || 0 == strcasecmp( valType, "p" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Ptr;
self->_entryTbl[entry_I].value.as.typePtr = (void*) ( (ArithPointer)Dictionary_Entry_Value_AsUnsignedInt( valueEntry ));
}
else {
/* Assume double */
Journal_DPrintf(
Journal_Register( InfoStream_Type, "myStream" ),
"Type to variable on variable condition not given, assuming double\n" );
self->_entryTbl[entry_I].value.type = VC_ValueType_Double;
self->_entryTbl[entry_I].value.as.typeDouble = Dictionary_Entry_Value_AsDouble( valueEntry );
}
}
void _FieldVariable_AssignFromXML( void* fieldVariable, Stg_ComponentFactory* cf, void* data ) {
FieldVariable* self = (FieldVariable*)fieldVariable;
FieldVariable_Register* fV_Register=NULL;
Dimension_Index dim;
Index fieldComponentCount;
Bool isCheckpointedAndReloaded, isCheckpointedAndReloaded2;
Dictionary_Entry_Value* feVarsList = NULL;
char* o_units = NULL;
DomainContext* context;
Bool useCacheMaxMin;
context = Stg_ComponentFactory_ConstructByKey(
cf,
self->name,
(Dictionary_Entry_Key)"Context",
DomainContext,
False,
data );
if( !context )
context = Stg_ComponentFactory_ConstructByName( cf, (Name)"context", DomainContext, False, data );
if (context) {
fV_Register = context->fieldVariable_Register;
assert( fV_Register );
}
dim = Stg_ComponentFactory_GetRootDictUnsignedInt( cf, (Dictionary_Entry_Key)"dim", 0 );
/* allow this to be overwritten by the component dub dict */
dim = Stg_ComponentFactory_GetUnsignedInt( cf, self->name, (Dictionary_Entry_Key)"dim", dim );
fieldComponentCount = Stg_ComponentFactory_GetUnsignedInt(
cf,
self->name,
(Dictionary_Entry_Key)"fieldComponentCount",
0 );
useCacheMaxMin = Stg_ComponentFactory_GetBool( cf, self->name, (Dictionary_Entry_Key)"useCacheMaxMin", False );
o_units = Stg_ComponentFactory_GetString( cf, self->name, (Dictionary_Entry_Key)"outputUnits", NULL );
/*
* Decide whether this FieldVariable will be checkpointed & reloaded, based on the dictionary list
* "fieldVariableToCheckpoint". NB may want to put this in the XML component definintion of a
* FieldVariable itself, but for now prefer list so it can be centrally set.
* -- Pat, Jules, Kath - 29 November 2006
*/
isCheckpointedAndReloaded2 = Stg_ComponentFactory_GetBool( cf, self->name, (Dictionary_Entry_Key)"isCheckpointedAndReloaded", False );
/* Case insensitive search */
feVarsList = Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"fieldVariablesToCheckpoint" );
if( NULL == feVarsList ) {
feVarsList = Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"FieldVariablesToCheckpoint" );
}
if( feVarsList != NULL ) {
Index listLength = Dictionary_Entry_Value_GetCount( feVarsList );
Index var_I = 0;
Dictionary_Entry_Value* feVarDictValue = NULL;
char* fieldVariableName;
/* if the 'fieldVariablesToCheckpoint' list is empty (but exists)
* checkpoint every field
* else selectively checkpoint based on list entries */
if( listLength == 0 ) {
isCheckpointedAndReloaded = True;
}
else {
isCheckpointedAndReloaded = False;
for ( var_I = 0; var_I < listLength; var_I++ ) {
feVarDictValue = Dictionary_Entry_Value_GetElement( feVarsList, var_I );
fieldVariableName = Dictionary_Entry_Value_AsString( feVarDictValue );
if ( 0 == strcmp( self->name, fieldVariableName ) ) {
isCheckpointedAndReloaded = True;
break;
}
}
}
}
else {
/* If there's no special list, just checkpoint/reload everything. */
isCheckpointedAndReloaded = True;
}
isCheckpointedAndReloaded = (isCheckpointedAndReloaded || isCheckpointedAndReloaded2 );
feVarsList = NULL;
/* also include check to see if this fevariable should be saved for analysis purposes */
feVarsList = Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"fieldVariablesToSave" );
if( NULL == feVarsList ) {
feVarsList = Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"FieldVariablesToSave" );
}
if( feVarsList != NULL ) {
Index listLength = Dictionary_Entry_Value_GetCount( feVarsList );
Index var_I = 0;
Dictionary_Entry_Value* feVarDictValue = NULL;
char* fieldVariableName;
for( var_I = 0; var_I < listLength; var_I++ ) {
feVarDictValue = Dictionary_Entry_Value_GetElement( feVarsList, var_I );
fieldVariableName = Dictionary_Entry_Value_AsString( feVarDictValue );
if( 0 == strcmp( self->name, fieldVariableName ) ) {
self->isSavedData = True;
break;
}
}
}
_FieldVariable_Init(
self,
context,
fieldComponentCount,
dim,
isCheckpointedAndReloaded,
o_units,
MPI_COMM_WORLD,
fV_Register,
useCacheMaxMin );
}
Dictionary_Entry_Value* _Stg_ComponentFactory_PluginGetDictionaryValue( void* cf, void *codelet, Dictionary_Entry_Key key, Dictionary_Entry_Value* defaultVal ) {
Stg_ComponentFactory* self = (Stg_ComponentFactory*) cf;
Stg_Component* plugin = (Stg_Component*)codelet;
Dictionary* thisPluginDict = NULL;
Dictionary* pluginDict = (Dictionary*)Dictionary_Get( self->rootDict, "plugins" );
Name pluginType;
Index pluginIndex;
Dictionary_Entry_Value* returnVal;
Bool usedDefault = False;
Stream* errorStream = Journal_Register( Error_Type, Stg_Component_Type );
Stream* stream = self->infoStream;
Journal_Firewall( self != NULL, errorStream, "In func %s: Stg_ComponentFactory is NULL.\n", __func__ );
Journal_PrintfL( stream, 2, "Getting parameter '%s': ", key );
Journal_Firewall( pluginDict != NULL, errorStream,
"In func %s: Stg_Component Factory's dictionary is NULL.\n", __func__ );
/* Get this plugins Dictionary */
for( pluginIndex = 0; pluginIndex < Dictionary_Entry_Value_GetCount( (Dictionary_Entry_Value*)pluginDict ); pluginIndex++ ) {
thisPluginDict = Dictionary_Entry_Value_AsDictionary( Dictionary_Entry_Value_GetElement( (Dictionary_Entry_Value*)pluginDict, pluginIndex ) );
pluginType = StG_Strdup( Dictionary_GetString( thisPluginDict, "Type" ) );
if( !strcmp( plugin->type, pluginType ) ){
Memory_Free( pluginType );
break;
}
Memory_Free( pluginType );
}
/* Get this Stg_Component's Dictionary */
Journal_Firewall( thisPluginDict != NULL, errorStream,
"In func %s: Can't find sub-dictionary for component '%s'.\n", __func__, plugin->name );
/* Get Value from dictionary */
returnVal = Dictionary_Get( thisPluginDict, key );
if ( !returnVal && defaultVal ) {
returnVal = Dictionary_GetDefault( thisPluginDict, key, defaultVal );
usedDefault = True;
}
/* Print Stuff */
if ( usedDefault ) {
Journal_PrintfL( stream, 2, "Using default value = " );
if ( Stream_IsPrintableLevel( stream, 2 ) )
Dictionary_Entry_Value_Print( returnVal, stream );
Journal_PrintfL( stream, 2, "\n" );
return returnVal;
}
else if ( returnVal ) {
Journal_PrintfL( stream, 2, "Found - Value = " );
if ( Stream_IsPrintableLevel( stream, 2 ) )
Dictionary_Entry_Value_Print( returnVal, stream );
Journal_PrintfL( stream, 2, "\n" );
}
else
Journal_PrintfL( stream, 2, "Not found.\n" );
return returnVal;
}
void _VariableAllVC_ReadDictionary( void* variableCondition, void* dictionary ) {
VariableAllVC* self = (VariableAllVC*)variableCondition;
Dictionary_Entry_Value* vcDictVal;
Dictionary_Entry_Value _vcDictVal;
Dictionary_Entry_Value* varsVal;
VariableAllVC_Entry_Index entry_I;
/* Find dictionary entry */
if (self->_dictionaryEntryName)
vcDictVal = Dictionary_Get( dictionary, self->_dictionaryEntryName );
else
{
vcDictVal = &_vcDictVal;
Dictionary_Entry_Value_InitFromStruct( vcDictVal, dictionary );
}
if (vcDictVal)
{
/* Obtain the variable entries */
self->_entryCount = Dictionary_Entry_Value_GetCount(Dictionary_Entry_Value_GetMember(vcDictVal, "variables"));
self->_entryTbl = Memory_Alloc_Array( VariableAllVC_Entry, self->_entryCount, "VariableAllVC->_entryTbl" );
varsVal = Dictionary_Entry_Value_GetMember(vcDictVal, "variables");
for (entry_I = 0; entry_I < self->_entryCount; entry_I++)
{
char* valType;
Dictionary_Entry_Value* valueEntry;
Dictionary_Entry_Value* varDictListVal;
varDictListVal = Dictionary_Entry_Value_GetElement(varsVal, entry_I);
valueEntry = Dictionary_Entry_Value_GetMember(varDictListVal, "value");
self->_entryTbl[entry_I].varName = Dictionary_Entry_Value_AsString(
Dictionary_Entry_Value_GetMember(varDictListVal, "name"));
valType = Dictionary_Entry_Value_AsString(Dictionary_Entry_Value_GetMember(varDictListVal, "type"));
if (!strcasecmp(valType, "func"))
{
char* funcName = Dictionary_Entry_Value_AsString(valueEntry);
self->_entryTbl[entry_I].value.type = VC_ValueType_CFIndex;
self->_entryTbl[entry_I].value.as.typeCFIndex = ConditionFunction_Register_GetIndex(
self->conFunc_Register, funcName);
}
else if (!strcasecmp(valType, "array"))
{
Dictionary_Entry_Value* valueElement;
Index i;
self->_entryTbl[entry_I].value.type = VC_ValueType_DoubleArray;
self->_entryTbl[entry_I].value.as.typeArray.size = Dictionary_Entry_Value_GetCount(valueEntry);
self->_entryTbl[entry_I].value.as.typeArray.array = Memory_Alloc_Array( double,
self->_entryTbl[entry_I].value.as.typeArray.size,"VariableAllVC->_entryTbl[].value.as.typeArray.array" );
for (i = 0; i < self->_entryTbl[entry_I].value.as.typeArray.size; i++)
{
valueElement = Dictionary_Entry_Value_GetElement(valueEntry, i);
self->_entryTbl[entry_I].value.as.typeArray.array[i] =
Dictionary_Entry_Value_AsDouble(valueElement);
}
}
else if( !strcasecmp( valType, "double" ) || !strcasecmp( valType, "d" ) || !strcasecmp( valType, "float" ) || !strcasecmp( valType, "f" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Double;
self->_entryTbl[entry_I].value.as.typeDouble = Dictionary_Entry_Value_AsDouble( valueEntry );
}
else if( !strcasecmp( valType, "integer" ) || !strcasecmp( valType, "int" ) || !strcasecmp( valType, "i" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Int;
self->_entryTbl[entry_I].value.as.typeInt = Dictionary_Entry_Value_AsUnsignedInt( valueEntry );
}
else if( !strcasecmp( valType, "short" ) || !strcasecmp( valType, "s" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Short;
self->_entryTbl[entry_I].value.as.typeShort = Dictionary_Entry_Value_AsUnsignedInt( valueEntry );
}
else if( !strcasecmp( valType, "char" ) || !strcasecmp( valType, "c" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Char;
self->_entryTbl[entry_I].value.as.typeChar = Dictionary_Entry_Value_AsUnsignedInt( valueEntry );
}
else if( !strcasecmp( valType, "pointer" ) || !strcasecmp( valType, "ptr" ) || !strcasecmp( valType, "p" ) ) {
self->_entryTbl[entry_I].value.type = VC_ValueType_Ptr;
self->_entryTbl[entry_I].value.as.typePtr = (void*) ( (ArithPointer) Dictionary_Entry_Value_AsUnsignedInt( valueEntry ));
}
else {
/* Assume double */
Journal_DPrintf( Journal_Register( InfoStream_Type, "myStream" ), "Type to variable on variable condition not given, assuming double\n" );
self->_entryTbl[entry_I].value.type = VC_ValueType_Double;
self->_entryTbl[entry_I].value.as.typeDouble = Dictionary_Entry_Value_AsDouble( valueEntry );
}
}
void _MeshGenerator_AssignFromXML( void* meshGenerator, Stg_ComponentFactory* cf, void* data ) {
MeshGenerator* self = (MeshGenerator*)meshGenerator;
Dictionary* dict;
unsigned nDims;
Dictionary_Entry_Value* meshList;
Dictionary_Entry_Value *enabledDimsList, *enabledIncList;
Mesh* mesh;
Bool partitioned;
assert( self );
assert( cf );
/* Rip out the components structure as a dictionary. */
dict = Dictionary_Entry_Value_AsDictionary( Dictionary_Get( cf->componentDict, (Dictionary_Entry_Key)self->name ) );
/* Set the communicator to a default. */
partitioned = Stg_ComponentFactory_GetBool( cf, self->name, (Dictionary_Entry_Key)"partitioned", 1 );
if( partitioned ) {
MeshGenerator_SetMPIComm( self, MPI_COMM_WORLD );
}
else {
MeshGenerator_SetMPIComm( self, MPI_COMM_SELF );
}
self->context = Stg_ComponentFactory_ConstructByKey( cf, self->name, (Dictionary_Entry_Key)"Context", AbstractContext, False, data );
if( !self->context )
self->context = Stg_ComponentFactory_ConstructByName( cf, (Name)"context", AbstractContext, False, data );
/* Read the individual mesh if specified. */
mesh = Stg_ComponentFactory_ConstructByKey( cf, self->name, (Dictionary_Entry_Key)"mesh", Mesh, False, data );
if( mesh )
MeshGenerator_AddMesh( self, mesh );
/* Read the mesh list, if it's there. */
meshList = Dictionary_Get( dict, (Dictionary_Entry_Key)"meshes" );
if( meshList ) {
unsigned nMeshes;
char* name;
unsigned m_i;
nMeshes = Dictionary_Entry_Value_GetCount( meshList );
for( m_i = 0; m_i < nMeshes; m_i++ ) {
Mesh* mesh;
name = Dictionary_Entry_Value_AsString( Dictionary_Entry_Value_GetElement( meshList, m_i ) );
mesh = Stg_ComponentFactory_ConstructByName( cf, (Name)name, Mesh, True, data );
MeshGenerator_AddMesh( self, mesh );
}
}
/* Read dimensions and state. */
nDims = Stg_ComponentFactory_GetUnsignedInt( cf, self->name, (Dictionary_Entry_Key)"dim", 2 );
nDims = Stg_ComponentFactory_GetUnsignedInt( cf, self->name, (Dictionary_Entry_Key)"dims", nDims );
MeshGenerator_SetDimSize( self, nDims );
enabledDimsList = Dictionary_Get( dict, (Dictionary_Entry_Key)"enabledDims" );
enabledIncList = Dictionary_Get( dict, (Dictionary_Entry_Key)"enabledIncidence" );
/* Clear dims/incidence flags */
unsigned d_i;
memset( self->enabledDims, 0, (nDims + 1) * sizeof(Bool) );
for( d_i = 0; d_i <= nDims; d_i++ )
memset( self->enabledInc[d_i], 0, (nDims + 1) * sizeof(Bool) );
if( enabledDimsList ) {
unsigned dim;
unsigned nEnabledDims;
nEnabledDims = Dictionary_Entry_Value_GetCount( enabledDimsList );
for( d_i = 0; d_i < nEnabledDims; d_i++ ) {
dim = Dictionary_Entry_Value_AsUnsignedInt( Dictionary_Entry_Value_GetElement( enabledDimsList, d_i ) );
if (dim > nDims)
Journal_Printf(Mesh_Warning, "Warning - in %s: *** Skipping out of range dimension: %d\n", __func__, dim);
else
MeshGenerator_SetDimState( self, dim, True );
}
}
else
{
/* Default to all dimensions enabled */
for( d_i = 0; d_i < nDims + 1; d_i++ )
MeshGenerator_SetDimState( self, d_i, True );
}
if( enabledIncList ) {
unsigned nEnabledInc;
unsigned fromDim, toDim;
nEnabledInc = Dictionary_Entry_Value_GetCount( enabledIncList );
assert( nEnabledInc % 2 == 0 );
for( d_i = 0; d_i < nEnabledInc; d_i += 2 ) {
fromDim = Dictionary_Entry_Value_AsUnsignedInt( Dictionary_Entry_Value_GetElement( enabledIncList, d_i ) );
toDim = Dictionary_Entry_Value_AsUnsignedInt( Dictionary_Entry_Value_GetElement( enabledIncList, d_i + 1 ) );
if (fromDim > nDims || toDim > nDims)
Journal_Printf( Mesh_Warning, "Warning - in %s: *** Skipping out of range incidence: %d to %d\n",
__func__ , fromDim, toDim);
else
MeshGenerator_SetIncidenceState( self, fromDim, toDim, True );
}
}
else
{
/* Default incidence setup 0->1,2,3 1->0,2 2->0,1 3->0,3 */
MeshGenerator_SetIncidenceState( self, 0, 0, True );
for( d_i = 1; d_i <= nDims; d_i ++ ) {
MeshGenerator_SetIncidenceState( self, 0, d_i, True );
MeshGenerator_SetIncidenceState( self, d_i, 0, True );
}
if (nDims == 2) {
MeshGenerator_SetIncidenceState( self, 1, 2, True );
MeshGenerator_SetIncidenceState( self, 2, 1, True );
MeshGenerator_SetIncidenceState( self, 2, 2, True );
}
if( nDims == 3 )
MeshGenerator_SetIncidenceState( self, 3, 3, True );
}
}
void _MeshVariable_AssignFromXML( void* meshVariable, Stg_ComponentFactory* cf, void* data ) {
MeshVariable* self = (MeshVariable*)meshVariable;
SizeT dataOffsets[] = { 0 };
StgVariable_DataType dataTypes[] = { 0 }; /* Init value later */
Index dataTypeCounts[] = { 1 };
Dictionary* componentDict = NULL;
Dictionary* thisComponentDict = NULL;
Name dataTypeName = NULL;
Name rankName = NULL;
void* variableRegister = NULL;
Name* names = NULL;
Stream* error = Journal_Register( Error_Type, (Name)self->type );
Mesh* mesh;
AbstractContext* context;
assert( self );
componentDict = cf->componentDict;
assert( componentDict );
thisComponentDict = Dictionary_GetDictionary( componentDict, self->name );
assert( thisComponentDict );
context = Stg_ComponentFactory_ConstructByKey( cf, self->name, (Dictionary_Entry_Key)"Context", AbstractContext, False, data );
if( !context )
context = Stg_ComponentFactory_ConstructByName( cf, (Name)"context", AbstractContext, False, data );
/* Grab Registers */
if(context)
variableRegister = context->variable_Register;
/* Construct the mesh. */
mesh = Stg_ComponentFactory_ConstructByKey( cf, self->name, (Dictionary_Entry_Key)"mesh", Mesh, True, data );
MeshVariable_SetMesh( self, mesh );
/* Get the topological element we're intereseted in. */
self->topoDim = Stg_ComponentFactory_GetUnsignedInt( cf, self->name, (Dictionary_Entry_Key)"topologicalDim", 0 );
/* Get Type of Variable */
dataTypeName = Dictionary_GetString( thisComponentDict, (Dictionary_Entry_Key)"DataType" );
if ( !strcasecmp( dataTypeName, "Double" ) )
dataTypes[0] = StgVariable_DataType_Double;
else if ( !strcasecmp( dataTypeName, "Float" ) )
dataTypes[0] = StgVariable_DataType_Float;
else if ( !strcasecmp( dataTypeName, "Int" ) )
dataTypes[0] = StgVariable_DataType_Int;
else if ( !strcasecmp( dataTypeName, "Char" ) )
dataTypes[0] = StgVariable_DataType_Char;
else if ( !strcasecmp( dataTypeName, "Short" ) )
dataTypes[0] = StgVariable_DataType_Short;
else
Journal_Firewall( False, error, "Variable '%s' cannot understand data type '%s'\n", self->name, dataTypeName );
/* Get Rank of Variable - i.e. Scalar or Vector */
rankName = Dictionary_GetString( thisComponentDict, (Dictionary_Entry_Key)"Rank" );
if( !strcasecmp( rankName, "Scalar" ) ){
dataTypeCounts[0] = 1;
}
else if ( !strcasecmp( rankName, "Vector" ) ){
Dictionary_Entry_Value* list;
Index nameCount = 0;
dataTypeCounts[0] = Stg_ComponentFactory_GetUnsignedInt( cf, self->name, (Dictionary_Entry_Key)"VectorComponentCount", nameCount );
/* Get Names from list */
if (( list = Dictionary_Get( thisComponentDict, (Dictionary_Entry_Key)"names" ) )) {
Index entry_I;
nameCount = Dictionary_Entry_Value_GetCount( list );
names = Memory_Alloc_Array( Name, nameCount, "Variable Names" );
for ( entry_I = 0 ; entry_I < nameCount ; entry_I++ )
names[ entry_I ] = Dictionary_Entry_Value_AsString( Dictionary_Entry_Value_GetElement(list, entry_I ) );
Journal_Firewall( nameCount >= dataTypeCounts[0], error, "Variable '%s' has too few names in list for %d vector components.\n", self->name, dataTypeCounts[0] );
}
}
else
Journal_Firewall( False, error, "Variable '%s' cannot understand rank '%s'\n", self->name, rankName );
_StgVariable_Init(
(StgVariable*)self,
context,
1,
dataOffsets,
dataTypes,
dataTypeCounts,
names,
0,
NULL,
_MeshVariable_GetMeshArraySize,
(void**)&self->arrayPtr,
True,
variableRegister );
/* Clean Up */
if (names)
Memory_Free(names);
}
void ModulesManager_Load( void* modulesManager, void* _dictionary, Name contextName ) {
ModulesManager* self = (ModulesManager*)modulesManager;
Dictionary* dictionary = (Dictionary*)_dictionary;
unsigned int entryCount;
unsigned int entry_I;
Dictionary_Entry_Value* modulesVal;
/*
* First add the directory list onto LD_LIBRARY_PATH so that it can potentially
* resolve the unknown symbols */
#ifndef NOSHARED
char* curEnvPath;
char* newEnvPath;
Index newEnvPathLength;
Index dir_I;
Index i, count;
char* dir;
newEnvPathLength = 0;
if( dictionary ) {
Dictionary_Entry_Value* localLibDirList = Dictionary_Get( dictionary, "LD_LIBRARY_PATH" );
if( localLibDirList ) {
count = Dictionary_Entry_Value_GetCount( localLibDirList );
for( i = 0; i < count; ++i ) {
dir = Dictionary_Entry_Value_AsString( Dictionary_Entry_Value_GetElement( localLibDirList, i ) );
ModulesManager_AddDirectory( "FromDictionary", dir );
}
}
}
for( dir_I = 0; dir_I < moduleDirectories->count; ++dir_I ) {
newEnvPathLength += strlen( (char*)Stg_ObjectList_ObjectAt( moduleDirectories, dir_I ) );
/* Add one make space for the ':' inbetween the directories */
newEnvPathLength += 1;
}
curEnvPath = getenv("LD_LIBRARY_PATH");
if( curEnvPath ) {
newEnvPathLength += strlen( curEnvPath );
}
if( newEnvPathLength > 0 ) {
/* Add one to make space for the Null Terminator '\0' */
newEnvPathLength += 1;
newEnvPath = Memory_Alloc_Array( char, newEnvPathLength, "LD_LIBRARY_PATH" );
newEnvPath[0] = '\0';
for( dir_I = 0; dir_I < moduleDirectories->count; ++dir_I ) {
strcat( newEnvPath, (char*)Stg_ObjectList_ObjectAt( moduleDirectories, dir_I ) );
strcat( newEnvPath, ":" );
}
if( curEnvPath ) {
strcat( newEnvPath, curEnvPath );
}
setenv( "LD_LIBRARY_PATH", newEnvPath, 1 );
Journal_Printf(
Journal_Register( Debug_Type, self->type ),
"Using LD_LIBRARY_PATH=%s\n",
newEnvPath );
Memory_Free( newEnvPath );
}
Name _ToolboxesManager_GetModuleName( void* toolboxesManager, Dictionary_Entry_Value* moduleVal, unsigned int entry_I ) {
return Dictionary_Entry_Value_AsString( Dictionary_Entry_Value_GetElement( moduleVal, entry_I ) );
}
/*----------------------------------------------------------------------------------------------------------
** Virtual functions
*/
void _LinearSpaceAdaptor_AssignFromXML( void* _self, Stg_ComponentFactory* cf, void* data ) {
LinearSpaceAdaptor* self = (LinearSpaceAdaptor*)_self;
Dictionary* dictionary = Dictionary_GetDictionary( cf->componentDict, self->name );
Dictionary_Entry_Value* optionsList = NULL;
Dictionary_Entry_Value* optionSet = NULL;
linearSpaceAdaptor_Segment* seg = NULL;
Index segmentCount;
Index segment_I;
AbstractContext* context;
assert( self );
assert( cf );
/* Call parent construct. */
_MeshAdaptor_AssignFromXML( self, cf, data );
context = (AbstractContext*)Stg_ComponentFactory_ConstructByKey( cf, self->name, (Dictionary_Entry_Key)"Context", AbstractContext, False, data );
if( !context )
context = Stg_ComponentFactory_ConstructByName( cf, (Name)"context", AbstractContext, True, data );
self->loadFromCheckPoint = context->loadFromCheckPoint;
if( self->loadFromCheckPoint )
return;
self->minX = Dictionary_Entry_Value_AsDouble( Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"minX" ) );
self->maxX = Dictionary_Entry_Value_AsDouble( Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"maxX" ) );
self->minY = Dictionary_Entry_Value_AsDouble( Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"minY" ) );
self->maxY = Dictionary_Entry_Value_AsDouble( Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"maxY" ) );
self->minZ = Dictionary_Entry_Value_AsDouble( Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"minZ" ) );
self->maxZ = Dictionary_Entry_Value_AsDouble( Dictionary_Get( cf->rootDict, (Dictionary_Entry_Key)"maxZ" ) );
/* Read mapping functions - X axis*/
optionsList = Dictionary_Get( dictionary, (Dictionary_Entry_Key)"mappingFunctionX" );
if( optionsList ) {
segmentCount = Dictionary_Entry_Value_GetCount(optionsList );
self->nSegmentsx = segmentCount;
self->tablex = Memory_Alloc_Array( linearSpaceAdaptor_Segment , segmentCount, "mapping table x" );
memset( self->tablex, 0, segmentCount * sizeof(linearSpaceAdaptor_Segment) );
for ( segment_I = 0 ; segment_I < segmentCount ; segment_I++) {
optionSet = Dictionary_Entry_Value_GetElement(optionsList, segment_I );
seg = &(self->tablex[segment_I]);
seg->x = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"point" ) );
seg->y = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"mappedTo" ) );
}
} else {
self->nSegmentsx = 0;
}
/* Read mapping functions - Y axis*/
optionsList = Dictionary_Get( dictionary, (Dictionary_Entry_Key)"mappingFunctionY" );
if( optionsList ) {
segmentCount = Dictionary_Entry_Value_GetCount(optionsList );
self->nSegmentsy = segmentCount;
self->tabley = Memory_Alloc_Array( linearSpaceAdaptor_Segment , segmentCount, "mapping table y" );
memset( self->tabley, 0, segmentCount * sizeof(linearSpaceAdaptor_Segment) );
for ( segment_I = 0; segment_I < segmentCount; segment_I++) {
optionSet = Dictionary_Entry_Value_GetElement(optionsList, segment_I );
seg = &(self->tabley[segment_I]);
seg->x = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"point" ) );
seg->y = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"mappedTo" ) );
}
} else {
self->nSegmentsy = 0;
}
/* Read mapping functions - Z axis*/
optionsList = Dictionary_Get( dictionary, (Dictionary_Entry_Key)"mappingFunctionZ" );
if( optionsList && ((DomainContext*)context)->dim==3 ) {
segmentCount = Dictionary_Entry_Value_GetCount(optionsList );
self->nSegmentsz = segmentCount;
self->tablez = Memory_Alloc_Array( linearSpaceAdaptor_Segment , segmentCount, "mapping table z" );
memset( self->tablez, 0, segmentCount * sizeof(linearSpaceAdaptor_Segment) );
for ( segment_I = 0 ; segment_I < segmentCount ; segment_I++) {
optionSet = Dictionary_Entry_Value_GetElement(optionsList, segment_I );
seg = &(self->tablez[segment_I]);
seg->x = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"point" ) );
seg->y = Dictionary_Entry_Value_AsDouble( Dictionary_Entry_Value_GetMember( optionSet, (Dictionary_Entry_Key)"mappedTo" ) );
}
} else {
self->nSegmentsz = 0;
}
_LinearSpaceAdaptor_Init( self );
}
void _Geothermal_FieldMaps_AssignFromXML( void* component, Stg_ComponentFactory* cf, void* data ) {
Geothermal_FieldMaps* self = (Geothermal_FieldMaps*)component;
Dictionary* dict = Codelet_GetPluginDictionary( component, cf->rootDict );
Dictionary_Entry_Value* mapList;
unsigned map_i;
Stream* errorStream = Journal_Register( ErrorStream_Type, Geothermal_FieldMaps_Type );
Stream_SetPrintingRank( errorStream, 0 );
/* Plugin-wide stuff */
self->context = (AbstractContext*)Stg_ComponentFactory_ConstructByName(
cf, "context", UnderworldContext, True, data );
/*self->swarm = Stg_ComponentFactory_ConstructByName(
cf, Dictionary_GetString( dict, "Swarm" ), Swarm, True, data );*/
mapList = Dictionary_Get( dict, (Dictionary_Entry_Key)"maps" );
if( mapList ) {
self->numMaps = Dictionary_Entry_Value_GetCount( mapList );
self->maps = malloc( self->numMaps * sizeof(Map*) );
}
else {
self->numMaps = 0;
self->maps = NULL;
}
/* Per map stuff */
for( map_i = 0; map_i < self->numMaps; map_i++ ) {
self->maps[map_i] = malloc( sizeof(Map) );
Dictionary* mapEntryDict = Dictionary_Entry_Value_AsDictionary( Dictionary_Entry_Value_GetElement( mapList, map_i ) );
char* tmpStr;
#define SDEK Dictionary_Entry_Key
#define SDGDWD Dictionary_GetDouble_WithDefault
#define SDGSWD Dictionary_GetString_WithDefault
#define SDGBWD Dictionary_GetBool_WithDefault
#define SCFCBN Stg_ComponentFactory_ConstructByName
strncpy( self->maps[map_i]->name, Dictionary_GetString( mapEntryDict, "name" ), FILENAME_MAX );
strncpy( self->maps[map_i]->outputPath, SDGSWD( mapEntryDict, (SDEK)"outputPath", self->context->outputPath ), FILENAME_MAX);
self->maps[map_i]->field = SCFCBN( cf, Dictionary_GetString( mapEntryDict, "Field" ), FeVariable, True, data );
self->maps[map_i]->depth = SDGDWD( mapEntryDict, (SDEK)"depthFromSurface", 0.0 );
/* Type of map */
self->maps[map_i]->outputAllNodes = False;
self->maps[map_i]->outputTopNodes = False;
self->maps[map_i]->outputDepth = False;
self->maps[map_i]->depth = 0.0;
self->maps[map_i]->heightField = NULL;
tmpStr = Dictionary_GetString( mapEntryDict, "of" );
if( strcmp( "surface", tmpStr ) == 0 ) {
self->maps[map_i]->outputTopNodes = True;
}
else if( strcmp( "volume", tmpStr ) == 0 ) {
self->maps[map_i]->outputAllNodes = True;
}
else if( strcmp( "depth", tmpStr ) == 0 ) {
self->maps[map_i]->outputDepth = True;
self->maps[map_i]->depth = SDGDWD( mapEntryDict, (SDEK)"depthFromSurface", 0.0 );
/* TODO: firewall if depth not given!!!*/
}
else if( strcmp( "height", tmpStr ) == 0 ) {
self->maps[map_i]->outputDepth = True;
self->maps[map_i]->heightField = SCFCBN( cf, Dictionary_GetString( mapEntryDict, "HeightField" ), FieldVariable, True, data );
/* TODO: firewall if HeightField not given!!!*/
}
Journal_Firewall(
self->maps[map_i]->outputTopNodes || self->maps[map_i]->outputAllNodes || self->maps[map_i]->outputDepth,
errorStream,
"Error: On FieldMaps plugin entry %u (named: \"%s\"), the \"of\" parameter must be either \"surface\", \"volume\", "
"\"depth\", or \"height\" (\"%s\" was given).\n",
map_i, self->maps[map_i]->name, tmpStr );
/* Formats */
self->maps[map_i]->gocadOutput = SDGBWD( mapEntryDict, (SDEK)"GOCADOutput", True );
self->maps[map_i]->nodeValues = 0;
self->maps[map_i]->nodeCoords = 0;
self->maps[map_i]->topNodesCount = 0;
}
ContextEP_Append( self->context, AbstractContext_EP_Dump, Geothermal_FieldMaps_Dump );
}
