void CArgs_gray::SetCmdLine( int argc, char* argv[] )
{
// start log
flog = FileOpenOrDie( "HEQLayers.log", "w" );
// log start time
time_t t0 = time( NULL );
char atime[32];
strcpy( atime, ctime( &t0 ) );
atime[24] = '\0'; // remove the newline
fprintf( flog, "Start: %s ", atime );
// parse command line args
if( argc < 3 ) {
printf( "Usage: HEQLayers <xml-file> <tag> [options].\n" );
exit( 42 );
}
for( int i = 1; i < argc; ++i ) {
vector<int> vi;
// echo to log
fprintf( flog, "%s ", argv[i] );
if( argv[i][0] != '-' ) {
if( !infile )
infile = argv[i];
else
tag = argv[i];
}
else if( GetArg( &zmin, "-zmin=%d", argv[i] ) )
;
else if( GetArg( &zmax, "-zmax=%d", argv[i] ) )
;
else if( GetArg( &pct, "-pct=%lf", argv[i] ) )
;
else if( GetArgList( vi, "-lrbt=", argv[i] ) && vi.size() == 4 )
memcpy( &roi, &vi[0], 4*sizeof(int) );
else {
printf( "Did not understand option '%s'.\n", argv[i] );
exit( 42 );
}
}
fprintf( flog, "\n\n" );
fflush( flog );
}
void CArgs_alnmon::SetCmdLine( int argc, char* argv[] )
{
// start log
flog = FileOpenOrDie( "cross_lowres.log", "w" );
// log start time
time_t t0 = time( NULL );
char atime[32];
strcpy( atime, ctime( &t0 ) );
atime[24] = '\0'; // remove the newline
fprintf( flog, "Assemble stack: %s ", atime );
// parse command line args
if( argc < 2 ) {
printf(
"Usage: cross_lowres -z=i,j [options].\n" );
exit( 42 );
}
vector<int> vi;
for( int i = 1; i < argc; ++i ) {
// echo to log
fprintf( flog, "%s ", argv[i] );
if( GetArgList( vi, "-z=", argv[i] ) ) {
if( 2 == vi.size() ) {
zmin = vi[0];
zmax = vi[1];
}
else {
fprintf( flog,
"Bad format in -z [%s].\n", argv[i] );
exit( 42 );
}
}
else if( IsArg( "-table", argv[i] ) )
table = true;
else {
printf( "Did not understand option '%s'.\n", argv[i] );
exit( 42 );
}
}
fprintf( flog, "\n\n" );
fflush( flog );
}
bool CArgs::SetCmdLine( int argc, char* argv[] )
{
// Parse command line args
vector<int> vi;
for( int i = 1; i < argc; ++i ) {
if( GetArgStr( tempdir, "-temp=", argv[i] ) ) {
printf( "Temp dir: '%s'.\n", tempdir );
GetIDB( tempdir );
}
else if( GetArgStr( cachedir, "-cache=", argv[i] ) )
printf( "Cache dir: '%s'.\n", cachedir );
else if( GetArgStr( prior, "-prior=", argv[i] ) )
printf( "Prior solutions: '%s'.\n", prior );
else if( GetArgStr( mode, "-mode=", argv[i] ) )
printf( "Mode: '%s'.\n", mode );
else if( GetArg( &nwks, "-nwks=%d", argv[i] ) )
;
else if( GetArgList( vi, "-zi=", argv[i] ) ) {
if( 2 == vi.size() ) {
zilo = vi[0];
zihi = vi[1];
printf( "zi [%d %d]\n", zilo, zihi );
}
else {
printf( "Bad format in -zi [%s].\n", argv[i] );
return false;
}
}
else if( GetArgList( vi, "-zo=", argv[i] ) ) {
if( 2 == vi.size() ) {
zolo = vi[0];
zohi = vi[1];
printf( "zo [%d %d]\n", zolo, zohi );
}
else {
printf( "Bad format in -zo [%s].\n", argv[i] );
return false;
}
}
else if( GetArg( &Wr, "-Wr=T,%lf", argv[i] ) ) {
regtype = 'T';
printf( "Rglizer Wr: T, %g\n", Wr );
}
else if( GetArg( &Wr, "-Wr=R,%lf", argv[i] ) ) {
regtype = 'R';
printf( "Rglizer Wr: R, %g\n", Wr );
}
else if( GetArg( &Etol, "-Etol=%lf", argv[i] ) )
printf( "Error tol: %g\n", Etol );
else if( GetArg( &iters, "-iters=%d", argv[i] ) )
printf( "Iterations: %d\n", iters );
else if( GetArg( &splitmin, "-splitmin=%d", argv[i] ) )
printf( "Split-min: %d\n", splitmin );
else if( GetArg( &maxthreads, "-maxthreads=%d", argv[i] ) )
printf( "Maxthreads: %d\n", maxthreads );
else if( IsArg( "-untwist", argv[i] ) )
untwist = true;
else {
printf( "Did not understand option '%s'.\n", argv[i] );
return false;
}
}
return true;
}
void CArgs_rgbm::SetCmdLine( int argc, char* argv[] )
{
// start log
flog = FileOpenOrDie( "RGBMerge.log", "w" );
// log start time
time_t t0 = time( NULL );
char atime[32];
strcpy( atime, ctime( &t0 ) );
atime[24] = '\0'; // remove the newline
fprintf( flog, "Start: %s ", atime );
// parse command line args
if( argc < 4 ) {
printf(
"Usage: RGBMerge <xml-file> <tag>"
" <-[R,G,B]=i,pct> [options].\n" );
exit( 42 );
}
for( int i = 1; i < argc; ++i ) {
vector<int> vi;
// echo to log
fprintf( flog, "%s ", argv[i] );
if( argv[i][0] != '-' ) {
if( !infile )
infile = argv[i];
else
tag = argv[i];
}
else if( GetArg( &zmin, "-zmin=%d", argv[i] ) )
;
else if( GetArg( &zmax, "-zmax=%d", argv[i] ) )
;
else if( ScanChan( 0, "-R=%d", argv[i] ) )
;
else if( ScanChan( 1, "-G=%d", argv[i] ) )
;
else if( ScanChan( 2, "-B=%d", argv[i] ) )
;
else if( GetArgStr( span, "-spanRGB=", argv[i] ) )
;
else if( GetArgList( vi, "-lrbt=", argv[i] ) && vi.size() == 4 )
memcpy( &roi, &vi[0], 4*sizeof(int) );
else {
printf( "Did not understand option '%s'.\n", argv[i] );
exit( 42 );
}
}
fprintf( flog, "\n\n" );
fflush( flog );
}
//
// Override the abstract Create function to make this
// a real class.
// Create works its way through the text in the scanner one
// line at a time. Each line must contain a command and a set
// of arguments. Create examines the command and then calls
// on helper functions to do the right things with the arguments.
//
bool CGLAList::Create() {
if (mScan == NULL) { // Quit if there is no scanner
return false;
}
//
// Work through the file.
// Each line should begin with a command and then be
// followed by a set of numeric arguments.
//
Lexeme* cLex;
CSymbol* cSym = NULL;
bool finished = false;
Start();
while ((cLex = mScan->NextLex())->lex != LEof) {
if (cLex->lex == LNewLine || cLex->lex==LSpace) continue;
if (cLex->lex == LWord) { // Hope we have a command
#ifdef DEBUG
eprintf("Word %s ", cLex->sVal);
wxLogMessage(gMsgBuff);
#endif
cSym = gSymTab->LookUpWord(cLex->sVal);
//
// Now read in the arguments.
//
int nArg = GetArgList();
#ifdef DEBUG
eprintf("Found %d arguments",nArg);
wxLogMessage(gMsgBuff);
for (int ii = 0; ii < nArg; ++ii) {
eprintf(" %f", gArguments[ii]);
wxLogMessage(gMsgBuff);
}
wxLogMessage("\r\n");
#endif
if (cSym != NULL) {
//
// Found a valid command, dispatch a function
// to handle it.
//
#ifdef DEBUG
eprintf("matches symbol %d\r\n",cSym->mSym);
wxLogMessage(gMsgBuff);
#endif
switch (cSym->mSym) {
case kGLColor:
if (nArg >= 3) {
GLfloat color[4];
color[0] = gArguments[0];
color[1] = gArguments[1];
color[2] = gArguments[2];
if (nArg > 3) {
color[3] = gArguments[3];
} else {
color[3] = 1.0f;
}
glMaterialfv(GL_FRONT, GL_AMBIENT, color);
glMaterialfv(GL_FRONT, GL_SPECULAR, color);
glColor3fv(color);
}
break;
case kGLPoint:
if (nArg >= 3) {
glBegin(GL_POINTS);
glVertex3fv(gArguments);
glEnd();
mBounds->AddPoint3fv(&gArguments[0]);
}
break;
case kGLTranslate:
if (nArg >= 3) {
glTranslatef(gArguments[0],gArguments[1],gArguments[2]);
}
break;
case kGLLine:
BuildLine(nArg);
break;
case kGLPolyLine:
BuildPolyLine(nArg);
break;
case kGLSphere:
BuildSphere(nArg);
break;
case kGLBox:
BuildBox(nArg);
break;
case kGLTriangle:
BuildTriangle(nArg);
break;
case kGLCylinder:
BuildCylinder(nArg);
break;
case kGLCap:
BuildCap(nArg);
break;
case kGLEnd:
finished = true;
break;
default:
eprintf("CGLAList.Create: Unimplemented GLA verb %s.\r\n", cSym->mName);
break;
}
} else {
eprintf("CGLAList.Create: %s is an unrecognised GLA verb.\r\n", cLex->sVal);
}
} else { // Did not find a command
//
// Print a message.
//
eprintf("CGLAList.Create: Cound not find a command on line %lu.\r\n", mScan->LineNumber());
eprintf("%s", mScan->GetLine());
}
if (finished) break;
//
// Eat tokens til we get to the
// end of the line (or a premature EOF)
//
while ((cLex = mScan->NextLex())->lex != LNewLine && cLex->lex != LEof);
} // end while
End();
ReleaseScanner();
return true;
}