/*
* Class: hdf_hdf5lib_H5
* Method: H5Ocopy
* Signature: (JLjava/lang/String;JLjava/lang/String;JJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Ocopy
(JNIEnv *env, jclass clss, jlong cur_loc_id, jstring cur_name,
jlong dst_loc_id, jstring dst_name, jlong create_id, jlong access_id)
{
const char *lCurName = NULL;
const char *lDstName = NULL;
herr_t status = FAIL;
UNUSED(clss);
if (NULL == cur_name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ocopy: src name is NULL");
if (NULL == dst_name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ocopy: dst name is NULL");
PIN_JAVA_STRING(ENVONLY, cur_name, lCurName, NULL, "H5Ocopy: src name not pinned");
PIN_JAVA_STRING(ENVONLY, dst_name, lDstName, NULL, "H5Ocopy: dest name not pinned");
if ((status = H5Ocopy((hid_t)cur_loc_id, lCurName, (hid_t)dst_loc_id, lDstName, (hid_t)create_id, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
if (lDstName)
UNPIN_JAVA_STRING(ENVONLY, dst_name, lDstName);
if (lCurName)
UNPIN_JAVA_STRING(ENVONLY, cur_name, lCurName);
} /* end Java_hdf_hdf5lib_H5_H5Ocopy */
/* ***if* H5Of/H5Ocopy_c
* NAME
* H5Ocopy_c
* PURPOSE
* Calls H5Ocopy
* INPUTS
* src_loc_id - Object identifier indicating the location of the source object to be copied
* src_name - Name of the source object to be copied
* src_name_len - Length of src_name
* dst_loc_id - Location identifier specifying the destination
* dst_name - Name to be assigned to the new copy
* dst_name_len - Length of dst_name
* ocpypl_id - Object copy property list
* lcpl_id - Link creation property list for the new hard link
*
* RETURNS
* 0 on success, -1 on failure
* AUTHOR
* M. Scot Breitenfeld
* March 14, 2012
* SOURCE
*/
int_f
nh5ocopy_c (hid_t_f *src_loc_id, _fcd src_name, size_t_f *src_name_len,
hid_t_f *dst_loc_id, _fcd dst_name, size_t_f *dst_name_len,
hid_t_f *ocpypl_id, hid_t_f *lcpl_id )
/******/
{
char *c_src_name = NULL; /* Buffer to hold C string */
char *c_dst_name = NULL; /* Buffer to hold C string */
int_f ret_value = 0; /* Return value */
/*
* Convert FORTRAN name to C name
*/
if((c_src_name = HD5f2cstring(src_name, (size_t)*src_name_len)) == NULL)
HGOTO_DONE(FAIL);
if((c_dst_name = HD5f2cstring(dst_name, (size_t)*dst_name_len)) == NULL)
HGOTO_DONE(FAIL);
/*
* Call H5Ocopy function.
*/
if(H5Ocopy( (hid_t)*src_loc_id, c_src_name, (hid_t)*dst_loc_id, c_dst_name,
(hid_t)*ocpypl_id, (hid_t)*lcpl_id) < 0)
HGOTO_DONE(FAIL);
done:
if(c_src_name)
HDfree(c_src_name);
if(c_dst_name)
HDfree(c_dst_name);
return ret_value;
}
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ocopy
* Signature: (JLjava/lang/String;JLjava/lang/String;JJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Ocopy
(JNIEnv *env, jclass clss, jlong cur_loc_id, jstring cur_name,
jlong dst_loc_id, jstring dst_name, jlong create_id, jlong access_id)
{
herr_t status = -1;
const char *lCurName;
const char *lDstName;
PIN_JAVA_STRING_TWO(cur_name, lCurName, dst_name, lDstName);
if (lCurName != NULL && lDstName != NULL) {
status = H5Ocopy((hid_t)cur_loc_id, lCurName, (hid_t)dst_loc_id, lDstName, (hid_t)create_id, (hid_t)access_id);
UNPIN_JAVA_STRING_TWO(cur_name, lCurName, dst_name, lDstName);
if (status < 0)
h5libraryError(env);
}
} /* end Java_hdf_hdf5lib_H5_H5Ocopy */
int
datCopy( const HDSLoc *locator1, const HDSLoc *locator2,
const char *name_str, int *status) {
char sourcename[DAT__SZNAM+1];
char cleanname[DAT__SZNAM+1];
hid_t parent_id = -1;
hid_t objid = -1;
if (*status != SAI__OK) return *status;
/* Validate input locators. */
dat1ValidateLocator( "datCopy", 1, locator1, 1, status );
dat1ValidateLocator( "datCopy", 1, locator2, 0, status );
dau1CheckName( name_str, 1, cleanname, sizeof(cleanname), status );
if (*status != SAI__OK) return *status;
/* Have to give the source name as "." doesn't seem to be allowed.
so get the name and the parent locator. */
objid = dat1RetrieveIdentifier( locator1, status );
/* If we are at the root group we can not get a parent so just use
the "/" name instead */
parent_id = dat1GetParentID( objid, 1, status );
if (*status == DAT__OBJIN) {
emsAnnul(status);
star_strlcpy( sourcename, "/", sizeof(sourcename));
parent_id = -1;
} else {
datName( locator1, sourcename, status );
}
CALLHDFQ(H5Ocopy( (parent_id == -1 ? objid : parent_id), sourcename,
locator2->group_id, cleanname, H5P_DEFAULT, H5P_DEFAULT));
CLEANUP:
if (parent_id) H5Gclose(parent_id);
return *status;
}
/*-------------------------------------------------------------------------
* Function: main
*
* Purpose: Exercise private object header behavior and routines
*
* Return: Success: 0
* Failure: 1
*
* Programmer: Robb Matzke
* Tuesday, November 24, 1998
*
*-------------------------------------------------------------------------
*/
int
main(void)
{
hid_t fapl = -1, file = -1;
hid_t dset = -1;
H5F_t *f = NULL;
char filename[1024];
H5O_hdr_info_t hdr_info; /* Object info */
H5O_loc_t oh_loc, oh_loc2; /* Object header locations */
time_t time_new, ro;
int chunkno; /* Chunk index for message */
int i; /* Local index variable */
hbool_t b; /* Index for "new format" loop */
herr_t ret; /* Generic return value */
/* Reset library */
h5_reset();
fapl = h5_fileaccess();
h5_fixname(FILENAME[0], fapl, filename, sizeof filename);
/* Loop over old & new formats */
for(b = FALSE; b <= TRUE; b++) {
/* Display info about testing */
if(b)
HDputs("Using new file format:");
else
HDputs("Using default file format:");
/* Set the format to use for the file */
if(H5Pset_libver_bounds(fapl, (b ? H5F_LIBVER_LATEST : H5F_LIBVER_EARLIEST), H5F_LIBVER_LATEST) < 0)
FAIL_STACK_ERROR
/* test on object continuation block */
if(test_cont(filename, fapl) < 0)
FAIL_STACK_ERROR
/* Create the file to operate on */
if((file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
TEST_ERROR
if(NULL == (f = (H5F_t *)H5I_object(file)))
FAIL_STACK_ERROR
if (H5AC_ignore_tags(f) < 0) {
H5_FAILED();
H5Eprint2(H5E_DEFAULT, stdout);
goto error;
}
/*
* Test object header creation
* (using default group creation property list only because it's convenient)
*/
TESTING("object header creation");
HDmemset(&oh_loc, 0, sizeof(oh_loc));
if(H5O_create(f, H5P_DATASET_XFER_DEFAULT, (size_t)64, (size_t)0, H5P_GROUP_CREATE_DEFAULT, &oh_loc/*out*/) < 0)
FAIL_STACK_ERROR
PASSED();
/* create a new message */
TESTING("message creation");
time_new = 11111111;
if(H5O_msg_create(&oh_loc, H5O_MTIME_NEW_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(1 != H5O_link(&oh_loc, 1, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
if(H5AC_flush(f, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5AC_expunge_entry(f, H5P_DATASET_XFER_DEFAULT, H5AC_OHDR, oh_loc.addr, H5AC__NO_FLAGS_SET) < 0)
FAIL_STACK_ERROR
if(NULL == H5O_msg_read(&oh_loc, H5O_MTIME_NEW_ID, &ro, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
if(ro != time_new)
TEST_ERROR
PASSED();
/*
* Test modification of an existing message.
*/
TESTING("message modification");
time_new = 33333333;
if(H5O_msg_write(&oh_loc, H5O_MTIME_NEW_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5AC_flush(f, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5AC_expunge_entry(f, H5P_DATASET_XFER_DEFAULT, H5AC_OHDR, oh_loc.addr, H5AC__NO_FLAGS_SET) < 0)
FAIL_STACK_ERROR
if(NULL == H5O_msg_read(&oh_loc, H5O_MTIME_NEW_ID, &ro, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
if(ro != time_new)
TEST_ERROR
/* Make certain that chunk #0 in the object header can be encoded with a 1-byte size */
if(H5O_get_hdr_info(&oh_loc, H5P_DATASET_XFER_DEFAULT, &hdr_info) < 0)
FAIL_STACK_ERROR
if(hdr_info.space.total >=256)
TEST_ERROR
PASSED();
/*
* Test creation of a bunch of messages one after another to see
* what happens when the object header overflows in core.
* (Use 'old' MTIME message here, because it is large enough to be
* replaced with a continuation message (the new one is too small)
* and the library doesn't understand how to migrate more than one
* message from an object header currently - QAK - 10/8/03)
*/
TESTING("object header overflow in memory");
for(i = 0; i < 40; i++) {
time_new = (i + 1) * 1000 + 1000000;
if(H5O_msg_create(&oh_loc, H5O_MTIME_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
} /* end for */
if(H5AC_flush(f, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5AC_expunge_entry(f, H5P_DATASET_XFER_DEFAULT, H5AC_OHDR, oh_loc.addr, H5AC__NO_FLAGS_SET) < 0)
FAIL_STACK_ERROR
/* Make certain that chunk #0 in the object header will be encoded with a 2-byte size */
if(H5O_get_hdr_info(&oh_loc, H5P_DATASET_XFER_DEFAULT, &hdr_info) < 0)
FAIL_STACK_ERROR
if(hdr_info.space.total < 256)
TEST_ERROR
PASSED();
/* Close & re-open file & object header */
/* (makes certain that an object header in the new format that transitions
* between 1-byte chunk #0 size encoding and 2-byte chunk #0 size encoding
* works correctly - QAK)
*/
TESTING("close & re-open object header");
if(H5O_close(&oh_loc) < 0)
FAIL_STACK_ERROR
if(H5Fclose(file) < 0)
FAIL_STACK_ERROR
if((file = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0)
FAIL_STACK_ERROR
if(NULL == (f = (H5F_t *)H5I_object(file)))
FAIL_STACK_ERROR
if (H5AC_ignore_tags(f) < 0)
FAIL_STACK_ERROR
oh_loc.file = f;
if(H5O_open(&oh_loc) < 0)
FAIL_STACK_ERROR
PASSED();
/*
* Test creation of a bunch of messages one after another to see
* what happens when the object header overflows on disk.
*/
TESTING("object header overflow on disk");
for(i = 0; i < 10; i++) {
time_new = (i + 1) * 1000 + 10;
if(H5O_msg_create(&oh_loc, H5O_MTIME_NEW_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5AC_flush(f, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5AC_expunge_entry(f, H5P_DATASET_XFER_DEFAULT, H5AC_OHDR, oh_loc.addr, H5AC__NO_FLAGS_SET) < 0)
FAIL_STACK_ERROR
} /* end for */
PASSED();
/*
* Delete all time messages.
*/
TESTING("message deletion");
if(H5O_msg_remove(&oh_loc, H5O_MTIME_NEW_ID, H5O_ALL, TRUE, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5O_msg_remove(&oh_loc, H5O_MTIME_ID, H5O_ALL, TRUE, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5O_msg_read(&oh_loc, H5O_MTIME_NEW_ID, &ro, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
if(H5O_msg_read(&oh_loc, H5O_MTIME_ID, &ro, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
PASSED();
/*
* Constant message handling.
* (can't write to them, but should be able to remove them)
*/
TESTING("constant message handling");
time_new = 22222222;
if(H5O_msg_create(&oh_loc, H5O_MTIME_NEW_ID, H5O_MSG_FLAG_CONSTANT, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5AC_flush(f, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
if(H5AC_expunge_entry(f, H5P_DATASET_XFER_DEFAULT, H5AC_OHDR, oh_loc.addr, H5AC__NO_FLAGS_SET) < 0)
FAIL_STACK_ERROR
if(NULL == H5O_msg_read(&oh_loc, H5O_MTIME_NEW_ID, &ro, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
if(ro != time_new)
TEST_ERROR
time_new = 33333333;
H5E_BEGIN_TRY {
ret = H5O_msg_write(&oh_loc, H5O_MTIME_NEW_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT);
} H5E_END_TRY;
if(ret >= 0)
TEST_ERROR
if(H5O_msg_remove(&oh_loc, H5O_MTIME_NEW_ID, H5O_ALL, TRUE, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
PASSED();
/* release resources */
TESTING("object header closing");
if(H5O_close(&oh_loc) < 0)
FAIL_STACK_ERROR
PASSED();
/*
* Test moving message to first chunk
*/
TESTING("locking messages");
HDmemset(&oh_loc, 0, sizeof(oh_loc));
if(H5O_create(f, H5P_DATASET_XFER_DEFAULT, (size_t)64, (size_t)0, H5P_GROUP_CREATE_DEFAULT, &oh_loc/*out*/) < 0)
FAIL_STACK_ERROR
if(1 != H5O_link(&oh_loc, 1, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
/* Create second object header, to guarantee that first object header uses multiple chunks */
HDmemset(&oh_loc2, 0, sizeof(oh_loc2));
if(H5O_create(f, H5P_DATASET_XFER_DEFAULT, (size_t)64, (size_t)0, H5P_GROUP_CREATE_DEFAULT, &oh_loc2/*out*/) < 0)
FAIL_STACK_ERROR
if(1 != H5O_link(&oh_loc2, 1, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
/* Fill object header with messages, creating multiple chunks */
for(i = 0; i < 10; i++) {
time_new = (i + 1) * 1000 + 10;
if(H5O_msg_create(&oh_loc, H5O_MTIME_NEW_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
} /* end for */
/* Get # of object header chunks */
if(H5O_get_hdr_info(&oh_loc, H5P_DATASET_XFER_DEFAULT, &hdr_info) < 0)
FAIL_STACK_ERROR
if(hdr_info.nchunks != 2)
TEST_ERROR
/* Add message to lock to object header */
time_new = 11111111;
if(H5O_msg_create(&oh_loc, H5O_MTIME_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
/* Verify chunk index for message */
if((chunkno = H5O_msg_get_chunkno(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT)) < 0)
FAIL_STACK_ERROR
if(chunkno != 1)
TEST_ERROR
/* Lock the message into the chunk */
if(H5O_msg_lock(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
/* Attempt to lock the message twice */
H5E_BEGIN_TRY {
ret = H5O_msg_lock(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT);
} H5E_END_TRY;
if(ret >= 0)
TEST_ERROR
/* Delete all the other messages, which would move the message into
* chunk #0, if it wasn't locked
*/
if(H5O_msg_remove(&oh_loc, H5O_MTIME_NEW_ID, H5O_ALL, TRUE, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
/* Verify chunk index for message */
if((chunkno = H5O_msg_get_chunkno(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT)) < 0)
FAIL_STACK_ERROR
if(chunkno != 1)
TEST_ERROR
/* Unlock the message */
if(H5O_msg_unlock(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
/* Attempt to unlock the message twice */
H5E_BEGIN_TRY {
ret = H5O_msg_unlock(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT);
} H5E_END_TRY;
if(ret >= 0)
TEST_ERROR
/* Close object headers */
if(H5O_close(&oh_loc2) < 0)
FAIL_STACK_ERROR
if(H5O_close(&oh_loc) < 0)
FAIL_STACK_ERROR
/* Open first object header */
HDmemset(&oh_loc, 0, sizeof(oh_loc));
if(H5O_create(f, H5P_DATASET_XFER_DEFAULT, (size_t)64, (size_t)0, H5P_GROUP_CREATE_DEFAULT, &oh_loc/*out*/) < 0)
FAIL_STACK_ERROR
if(1 != H5O_link(&oh_loc, 1, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
/* Create second object header, to guarantee that first object header uses multiple chunks */
HDmemset(&oh_loc2, 0, sizeof(oh_loc2));
if(H5O_create(f, H5P_DATASET_XFER_DEFAULT, (size_t)64, (size_t)0, H5P_GROUP_CREATE_DEFAULT, &oh_loc2/*out*/) < 0)
FAIL_STACK_ERROR
if(1 != H5O_link(&oh_loc2, 1, H5P_DATASET_XFER_DEFAULT))
FAIL_STACK_ERROR
/* Add message to move to object header */
time_new = 11111111;
if(H5O_msg_create(&oh_loc, H5O_MTIME_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
/* Verify chunk index for message */
if((chunkno = H5O_msg_get_chunkno(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT)) < 0)
FAIL_STACK_ERROR
if(chunkno != 0)
TEST_ERROR
/* Lock the message into the chunk */
if(H5O_msg_lock(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
/* Fill object header with messages, creating multiple chunks */
/* (would normally move locked message to new chunk) */
for(i = 0; i < 10; i++) {
time_new = (i + 1) * 1000 + 10;
if(H5O_msg_create(&oh_loc, H5O_MTIME_NEW_ID, 0, 0, &time_new, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
} /* end for */
/* Get # of object header chunks */
if(H5O_get_hdr_info(&oh_loc, H5P_DATASET_XFER_DEFAULT, &hdr_info) < 0)
FAIL_STACK_ERROR
if(hdr_info.nchunks != 2)
TEST_ERROR
/* Verify chunk index for message */
if((chunkno = H5O_msg_get_chunkno(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT)) < 0)
FAIL_STACK_ERROR
if(chunkno != 0)
TEST_ERROR
/* Unlock the message */
if(H5O_msg_unlock(&oh_loc, H5O_MTIME_ID, H5P_DATASET_XFER_DEFAULT) < 0)
FAIL_STACK_ERROR
/* Close object headers */
if(H5O_close(&oh_loc2) < 0)
FAIL_STACK_ERROR
if(H5O_close(&oh_loc) < 0)
FAIL_STACK_ERROR
PASSED();
/* Test reading datasets with undefined object header messages
* and the various "fail/mark if unknown" object header message flags
*/
HDputs("Accessing objects with unknown header messages:");
{
hid_t file2; /* File ID for 'bogus' object file */
hid_t sid; /* Dataspace ID */
hid_t aid; /* Attribute ID */
const char *testfile = H5_get_srcdir_filename(FILE_BOGUS);
TESTING("object with unknown header message and no flags set");
/* Open the file with objects that have unknown header messages (generated with gen_bogus.c) */
if((file2 = H5Fopen(testfile, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0)
TEST_ERROR
/* Open the dataset with the unknown header message, but no extra flags */
if((dset = H5Dopen2(file2, "/Dataset1", H5P_DEFAULT)) < 0)
TEST_ERROR
if(H5Dclose(dset) < 0)
TEST_ERROR
PASSED();
TESTING("object in r/o file with unknown header message & 'fail if unknown and open for write' flag set");
/* Open the dataset with the unknown header message, and "fail if unknown and open for write" flag */
if((dset = H5Dopen2(file2, "/Dataset2", H5P_DEFAULT)) < 0)
TEST_ERROR
if(H5Dclose(dset) < 0)
TEST_ERROR
PASSED();
TESTING("object in r/o file with unknown header message & 'fail if unknown always' flag set");
/* Attempt to open the dataset with the unknown header message, and "fail if unknown always" flag */
H5E_BEGIN_TRY {
dset = H5Dopen2(file2, "/Dataset3", H5P_DEFAULT);
} H5E_END_TRY;
if(dset >= 0) {
H5Dclose(dset);
TEST_ERROR
} /* end if */
PASSED();
TESTING("object with unknown header message & 'mark if unknown' flag set");
/* Copy object with "mark if unknown" flag on message into file that can be modified */
if(H5Ocopy(file2, "/Dataset4", file, "/Dataset4", H5P_DEFAULT, H5P_DEFAULT) < 0)
TEST_ERROR
/* Close the file we created (to flush changes to file) */
if(H5Fclose(file) < 0)
TEST_ERROR
/* Re-open the file created, with read-only permissions */
if((file = H5Fopen(filename, H5F_ACC_RDONLY, fapl)) < 0)
TEST_ERROR
/* Open the dataset with the "mark if unknown" message */
if((dset = H5Dopen2(file, "/Dataset4", H5P_DEFAULT)) < 0)
TEST_ERROR
/* Check that the "unknown" message was _NOT_ marked */
if(H5O_check_msg_marked_test(dset, FALSE) < 0)
FAIL_STACK_ERROR
/* Close the dataset */
if(H5Dclose(dset) < 0)
TEST_ERROR
/* Close the file we created (to flush change to object header) */
if(H5Fclose(file) < 0)
TEST_ERROR
/* Re-open the file created */
if((file = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0)
TEST_ERROR
/* Open the dataset with the "mark if unknown" message */
if((dset = H5Dopen2(file, "/Dataset4", H5P_DEFAULT)) < 0)
TEST_ERROR
/* Create data space */
if((sid = H5Screate(H5S_SCALAR)) < 0)
FAIL_STACK_ERROR
/* Create an attribute, to get the object header into write access */
if((aid = H5Acreate2(dset, "Attr", H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
FAIL_STACK_ERROR
/* Close dataspace */
if(H5Sclose(sid) < 0)
FAIL_STACK_ERROR
/* Close attribute */
if(H5Aclose(aid) < 0)
FAIL_STACK_ERROR
/* Close the dataset */
if(H5Dclose(dset) < 0)
TEST_ERROR
/* Close the file we created (to flush change to object header) */
if(H5Fclose(file) < 0)
TEST_ERROR
/* Re-open the file created */
if((file = H5Fopen(filename, H5F_ACC_RDONLY, fapl)) < 0)
TEST_ERROR
/* Re-open the dataset with the "mark if unknown" message */
if((dset = H5Dopen2(file, "/Dataset4", H5P_DEFAULT)) < 0)
TEST_ERROR
/* Check that the "unknown" message was marked */
if(H5O_check_msg_marked_test(dset, TRUE) < 0)
FAIL_STACK_ERROR
/* Close the dataset */
if(H5Dclose(dset) < 0)
TEST_ERROR
/* Close the file with the bogus objects */
if(H5Fclose(file2) < 0)
TEST_ERROR
PASSED();
/* Open the file with objects that have unknown header messages (generated with gen_bogus.c) with RW intent this time */
if((file2 = H5Fopen(testfile, H5F_ACC_RDWR, H5P_DEFAULT)) < 0)
TEST_ERROR
TESTING("object in r/w file with unknown header message & 'fail if unknown and open for write' flag set");
/* Attempt to open the dataset with the unknown header message, and "fail if unknown and open for write" flag */
H5E_BEGIN_TRY {
dset = H5Dopen2(file2, "/Dataset2", H5P_DEFAULT);
} H5E_END_TRY;
if(dset >= 0) {
H5Dclose(dset);
TEST_ERROR
} /* end if */
PASSED();
TESTING("object in r/w file with unknown header message & 'fail if unknown always' flag set");
/* Attempt to open the dataset with the unknown header message, and "fail if unknown always" flag */
H5E_BEGIN_TRY {
dset = H5Dopen2(file2, "/Dataset3", H5P_DEFAULT);
} H5E_END_TRY;
if(dset >= 0) {
H5Dclose(dset);
TEST_ERROR
} /* end if */
void MAJ_236_300_champs(med_idt fid)
{
med_err lret,ret;
/* med_idt _datagroup=0; */
med_field_type typcha;
char nomcha [MED_NAME_SIZE+1]="";
char _meshname [MED_NAME_SIZE+1]="";
char _dtunit [MED_SNAME_SIZE+1]="";
char *comp= NULL, *unit= NULL;
med_int ncomp,ncha;
med_int _ncstp=0;
med_bool _local=MED_FALSE;
htri_t _datasetexist;
char _pathi[MED_TAILLE_CHA+1+MED_NAME_SIZE+1]=MED_CHA;
char _pathf[MED_TAILLE_CHA+2+MED_NAME_SIZE+1]="/CHA_/";
char _pathtmp[MED_TAILLE_CHA+3]="/CHA__/";
int i,j;
char nomlien[MED_NAME_SIZE+1]="";
char * lien = NULL;
med_int nln,nval;
med_int _nloc,_intgeotype,_sdim;
char _pathloc[MED_TAILLE_GAUSS+MED_NAME_SIZE+1]=MED_GAUSS;
med_int _npar,_numdt,_numit;
char _pathpari[MED_TAILLE_NUM_DATA+MED_NAME_SIZE+1+2*MED_MAX_PARA+1+1]=MED_NUM_DATA;
char _pathparf[MED_TAILLE_NUM_DATA+MED_NAME_SIZE+1+2*MED_MAX_PARA+1+1]=MED_NUM_DATA;
int _pathparlen;
med_size _n=0;
char _cpstnamei[2*MED_MAX_PARA+1]="";
char _cpstnamef[2*MED_MAX_PARA+1]="";
char _uniname[MED_SNAME_SIZE+1]="";
/* hid_t _lac_plist_id; */
hid_t _lcp_plist_id;
hid_t _ocp_plist_id;
med_bool _createunt = MED_TRUE;
MAJ_version_num(fid,2,3,6);
/* MAJ des varaibles scalaires */
_npar = MEDnParameter(fid);
if (_npar > 0) {
fprintf(stdout," >>> Normalisation des paramètres scalaires\n");
_pathparf[MED_TAILLE_NUM_DATA-2]='_';
/* _lac_plist_id = H5Pcreate( H5P_LINK_ACCESS ); */
_ocp_plist_id = H5Pcreate( H5P_OBJECT_COPY );
_lcp_plist_id = H5Pcreate( H5P_LINK_CREATE );
H5Pset_create_intermediate_group( _lcp_plist_id, 1 );
H5Pset_copy_object( _ocp_plist_id, H5O_COPY_SHALLOW_HIERARCHY_FLAG);
}
for (i=0 ; i < _npar ; i++ ) {
MED_ERR_EXIT_IF (_MEDobjectGetName(fid, _pathpari ,i, &_pathpari[MED_TAILLE_NUM_DATA]) < 0,
MED_ERR_ACCESS,MED_ERR_DATAGROUP,_pathpari);
strcpy(&_pathparf[MED_TAILLE_NUM_DATA],&_pathpari[MED_TAILLE_NUM_DATA]);
/* SSCRUTE(_pathparf); */
/* SSCRUTE(_pathpari); */
/*Copie le group avec ses attributs et les objets de premier niveau.*/
ret = H5Ocopy(fid,_pathpari,fid,_pathparf,_ocp_plist_id,_lcp_plist_id);
/* ret = H5Lcopy(fid,_pathpari,fid,_pathparf,_lcp_plist_id,_lac_plist_id); */
EXIT_IF(ret < 0,"Copie du datagroup",_pathpari);
_pathparlen=strlen(_pathpari);
_pathpari[_pathparlen]='/';_pathparf[_pathparlen]='/';
++_pathparlen;
_pathpari[_pathparlen]='\0';_pathparf[_pathparlen]='\0';
/* SSCRUTE(_pathparf); */
/* SSCRUTE(_pathpari); */
ret =_MEDnObjects(fid,_pathpari, &_n);
MED_ERR_EXIT_IF( (ret == (MED_ERR_COUNT + MED_ERR_DATAGROUP)), MED_ERR_COUNT,MED_ERR_PARAMETER,_pathpari);
for (j=0 ; j < _n ; ++j ) {
MED_ERR_EXIT_IF (_MEDobjectGetName(fid, _pathpari ,j, &_pathpari[_pathparlen]) < 0,
MED_ERR_ACCESS,MED_ERR_DATAGROUP,_pathpari);
MED_ERR_EXIT_IF (_MEDattributeNumRdByName(fid,_pathpari,MED_NOM_NOR,
MED_INTERNAL_INT,(unsigned char * const ) &_numit) < 0,
MED_ERR_READ,MED_ERR_ATTRIBUTE,MED_NOM_NOR);
MED_ERR_EXIT_IF (_MEDattributeNumRdByName(fid,_pathpari,MED_NOM_NDT,
MED_INTERNAL_INT,(unsigned char * const ) &_numdt) < 0,
MED_ERR_READ,MED_ERR_ATTRIBUTE,MED_NOM_NDT);
MED_ERR_EXIT_IF (_MEDattributeStringRdByName(fid,_pathpari,MED_NOM_UNI,
MED_SNAME_SIZE,_uniname) < 0,
MED_ERR_READ,MED_ERR_ATTRIBUTE,MED_NOM_NDT);
_MEDgetComputationStepName(MED_SORT_DTIT,_numdt,_numit,&_pathparf[_pathparlen]);
/* strcat(_pathpari,"/"); */
/* strcat(_pathparf,"/"); */
/* SSCRUTE(_pathparf); */
/* SSCRUTE(_pathpari); */
/* ret = H5Ocopy(fid,_pathpari,fid,_pathparf,_ocp_plist_id,_lcp_plist_id); */
/* ret = H5Lcopy(fid,_pathpari,fid,_pathparf,_lcp_plist_id,_lac_plist_id); */
/* H5Eprint1(stderr); */
/* EXIT_IF(ret < 0,"Copie d'une étape de calcul du paramètre scalaire ",_pathpari); */
/*On modifie temporairement _pathpari pour pointer dans _pathparf*/
_pathpari[MED_TAILLE_NUM_DATA-2]='_';
/* SSCRUTE(_pathparf); */
/* SSCRUTE(_pathpari); */
ret = H5Gmove(fid, _pathpari, _pathparf );
EXIT_IF(ret < 0,"Renommage de l'étape de calcul",_pathpari);
_pathpari[MED_TAILLE_NUM_DATA-2]='A';
MED_ERR_EXIT_IF(H5Adelete_by_name( fid, _pathparf, MED_NOM_UNI, H5P_DEFAULT ) < 0,
MED_ERR_DELETE,MED_ERR_ATTRIBUTE,_pathparf);
_pathparf[_pathparlen]='\0';
_pathpari[_pathparlen]='\0';
if ( _createunt ) {
MED_ERR_EXIT_IF (_MEDattributeStringWrByName(fid,_pathparf,MED_NOM_UNT, MED_SNAME_SIZE,_uniname) < 0,
MED_ERR_WRITE,MED_ERR_ATTRIBUTE,MED_NOM_UNT);
_createunt = MED_FALSE;
}
}
_createunt = MED_TRUE;
_pathpari[MED_TAILLE_NUM_DATA]='\0';
}
if ( _npar > 0 ) {
_pathpari[MED_TAILLE_NUM_DATA]='\0';
_pathparf[MED_TAILLE_NUM_DATA]='\0';
MED_ERR_EXIT_IF ( H5Ldelete(fid,_pathpari,H5P_DEFAULT) < 0 ,
MED_ERR_DELETE,MED_ERR_LINK,_pathpari);
ret = H5Gmove(fid, _pathparf, _pathpari );
EXIT_IF(ret < 0,"Renommage du group de paramètres scalaires",_pathparf);
}
/* MAJ des localisations */
_nloc = MEDnLocalization(fid);
/* ISCRUTE(_nloc); */
if (_nloc > 0)
fprintf(stdout," >>> Normalisation des localisations des points d'intégration\n");
for (i=0 ; i < _nloc ; i++ ) {
/* SSCRUTE(_pathloc); */
MED_ERR_EXIT_IF (_MEDobjectGetName(fid, _pathloc ,i, &_pathloc[MED_TAILLE_GAUSS]) < 0,
MED_ERR_ACCESS,MED_ERR_DATAGROUP,_pathloc);
/* SSCRUTE(_pathloc); */
MED_ERR_EXIT_IF (_MEDattributeNumRdByName(fid,_pathloc,MED_NOM_GEO,
MED_INTERNAL_INT,(unsigned char * const ) &_intgeotype) < 0,
MED_ERR_READ,MED_ERR_ATTRIBUTE,MED_NOM_GEO);
_sdim = (_intgeotype/100);
MED_ERR_EXIT_IF (_MEDattributeNumWrByName(fid,_pathloc,MED_NOM_DIM,
MED_INTERNAL_INT,(const unsigned char * const) &_sdim) < 0,
MED_ERR_WRITE,MED_ERR_ATTRIBUTE,MED_NOM_DIM);
MED_ERR_EXIT_IF ( _MEDattributeStringWrByName(fid,_pathloc,MED_NOM_INM,MED_NAME_SIZE,"") < 0,
MED_ERR_WRITE,MED_ERR_ATTRIBUTE,MED_NOM_INM);
_pathloc[MED_TAILLE_GAUSS]='\0';
}
/* MAJ des liens */
nln = MEDnLink(fid);
if (nln > 0)
fprintf(stdout," >>> Normalisation des liens\n");
for (i=1 ; i <= nln ; i++ ) {
ret = MEDlinkInfo(fid, i, nomlien, &nval);
EXIT_IF(ret,"Erreur a la demande d'information sur le lien",NULL);
/* printf("\t- Lien n°%i de nom |%s| et de taille "IFORMAT"\n",i,nomlien,nval); */
lien = (char *) malloc((nval+1)*sizeof(char));
EXIT_IF(lien == NULL,NULL,NULL);
ret = MEDlinkRd(fid, nomlien, lien );
EXIT_IF(ret,"Erreur a la lecture du lien : ",nomlien);
MAJ_version_num(fid,3,0,8);
ret = MED30linkWr(fid,nomlien,lien);
EXIT_IF(ret,"Erreur a l'écrtiure du lien : ",nomlien);
MAJ_version_num(fid,2,3,6);
lien[nval] = '\0';
/* printf("\t\t|%s|\n\n",lien); */
free(lien);
}
/* combien de champs dans le fichier */
ncha = MEDnField(fid);
EXIT_IF(ncha < 0,"lors de la lecture du nombre de champs",NULL);
/* MAJ des champs */
for (i =0;i<ncha;i++) {
lret = 0;
/* Lecture du nombre de composantes */
ncomp = MEDfieldnComponent(fid,i+1);
if (ncomp < 0) {
MESSAGE("Erreur à la lecture du nombre de composantes : "); ISCRUTE(ncomp);
exit(1);
}
/* Lecture du type du champ, des noms des composantes et du nom de l'unité*/
comp = (char*) malloc(ncomp*MED_SNAME_SIZE+1);
EXIT_IF(comp == NULL,NULL,NULL);
unit = (char*) malloc(ncomp*MED_SNAME_SIZE+1);
EXIT_IF(unit == NULL,NULL,NULL);
/* ret = MED231champInfoEtRen(fid,i+1,nomcha,&typcha,comp,unit,ncomp); */
ret = MEDfieldInfo(fid,i+1,nomcha,_meshname,&_local,&typcha,comp,unit,_dtunit,&_ncstp);
MED_ERR_EXIT_IF(ret,MED_ERR_ACCESS,MED_ERR_FIELD,nomcha);
/* creation du champ destination */
MAJ_version_num(fid,3,0,8);
EXIT_IF( H5Gmove(fid, _pathi, _pathtmp ) < 0,"Switch to ",_pathtmp);
_datasetexist=H5Lexists( fid, _pathf, H5P_DEFAULT );
if (_datasetexist ) { EXIT_IF( (H5Gmove(fid, _pathf, _pathi ) < 0) ,"Switch to ",_pathi); }
MED_ERR_EXIT_IF( MEDfieldCr(fid,nomcha,typcha,ncomp,comp,unit,_dtunit,_meshname ) < 0,
MED_ERR_CREATE,MED_ERR_FIELD,_pathf);
EXIT_IF( H5Gmove(fid, _pathi , _pathf ) < 0,"Switch to ",_pathf);
EXIT_IF( H5Gmove(fid, _pathtmp, _pathi ) < 0,"Switch to ",_pathi);
MAJ_version_num(fid,2,3,6);
free(comp);
free(unit);
lret = MAJ_236_300_fieldOnEntity( fid, nomcha, _meshname, typcha, ncomp, MED_NODE,_ncstp, _pathi, _pathf);
if (lret != 0) {
MESSAGE("Erreur à la lecture des champs aux noeuds "); exit(1);
}
lret = MAJ_236_300_fieldOnEntity( fid, nomcha, _meshname, typcha, ncomp, MED_CELL,_ncstp, _pathi, _pathf);
if (lret != 0) {
MESSAGE("Erreur à la lecture des champs aux mailles "); exit(1);
}
lret = MAJ_236_300_fieldOnEntity( fid, nomcha, _meshname, typcha, ncomp, MED_DESCENDING_FACE,_ncstp, _pathi, _pathf);
if (lret != 0) {
MESSAGE("Erreur à la lecture des champs aux faces "); exit(1);
}
lret = MAJ_236_300_fieldOnEntity( fid, nomcha, _meshname, typcha, ncomp, MED_DESCENDING_EDGE,_ncstp, _pathi, _pathf);
if (lret != 0) {
MESSAGE("Erreur à la lecture des champs aux aretes "); exit(1);
}
lret = MAJ_236_300_fieldOnEntity( fid, nomcha, _meshname, typcha, ncomp, MED_NODE_ELEMENT,_ncstp, _pathi, _pathf);
if (lret != 0) {
MESSAGE("Erreur à la lecture des champs aux aretes "); exit(1);
}
}
_datasetexist=H5Lexists( fid, _pathf, H5P_DEFAULT );
if (_datasetexist ) {
EXIT_IF( (H5Ldelete(fid,_pathi, H5P_DEFAULT) < 0) ,"Delete ",_pathi);
EXIT_IF( (H5Gmove(fid, _pathf, _pathi ) < 0) ,"Switch to ",_pathf);
}
}
int
main (int argc, const char *argv[])
{
hid_t fid_src = -1;
hid_t fid_dst = -1;
unsigned flag = 0;
unsigned verbose = 0;
unsigned parents = 0;
hid_t ocpl_id = (-1); /* Object copy property list */
hid_t lcpl_id = (-1); /* Link creation property list */
int opt;
int li_ret;
h5tool_link_info_t linkinfo;
h5tools_setprogname(PROGRAMNAME);
h5tools_setstatus(EXIT_SUCCESS);
/* initialize h5tools lib */
h5tools_init();
/* init linkinfo struct */
HDmemset(&linkinfo, 0, sizeof(h5tool_link_info_t));
/* Check for no command line parameters */
if(argc == 1)
{
usage();
leave(EXIT_FAILURE);
} /* end if */
/* parse command line options */
while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF)
{
switch ((char)opt)
{
case 'd':
oname_dst = HDstrdup(opt_arg);
break;
case 'f':
/* validate flag */
if (parse_flag(opt_arg,&flag)<0)
{
usage();
leave(EXIT_FAILURE);
}
str_flag = HDstrdup(opt_arg);
break;
case 'h':
usage();
leave(EXIT_SUCCESS);
break;
case 'i':
fname_src = HDstrdup(opt_arg);
break;
case 'o':
fname_dst = HDstrdup(opt_arg);
break;
case 'p':
parents = 1;
break;
case 's':
oname_src = HDstrdup(opt_arg);
break;
case 'V':
print_version(h5tools_getprogname());
leave(EXIT_SUCCESS);
break;
case 'v':
verbose = 1;
break;
default:
usage();
leave(EXIT_FAILURE);
}
} /* end of while */
/*-------------------------------------------------------------------------
* check for missing file/object names
*-------------------------------------------------------------------------*/
if (fname_src==NULL)
{
error_msg("Input file name missing\n");
usage();
leave(EXIT_FAILURE);
}
if (fname_dst==NULL)
{
error_msg("Output file name missing\n");
usage();
leave(EXIT_FAILURE);
}
if (oname_src==NULL)
{
error_msg("Source object name missing\n");
usage();
leave(EXIT_FAILURE);
}
if (oname_dst==NULL)
{
error_msg("Destination object name missing\n");
usage();
leave(EXIT_FAILURE);
}
/*-------------------------------------------------------------------------
* open output file
*-------------------------------------------------------------------------*/
/* Attempt to open an existing HDF5 file first. Need to open the dst file
before the src file just in case that the dst and src are the same file
*/
fid_dst = h5tools_fopen(fname_dst, H5F_ACC_RDWR, H5P_DEFAULT, NULL, NULL, 0);
/*-------------------------------------------------------------------------
* open input file
*-------------------------------------------------------------------------*/
fid_src = h5tools_fopen(fname_src, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, 0);
/*-------------------------------------------------------------------------
* test for error in opening input file
*-------------------------------------------------------------------------*/
if (fid_src==-1)
{
error_msg("Could not open input file <%s>...Exiting\n", fname_src);
leave(EXIT_FAILURE);
}
/*-------------------------------------------------------------------------
* create an output file when failed to open it
*-------------------------------------------------------------------------*/
/* If we couldn't open an existing file, try creating file */
/* (use "EXCL" instead of "TRUNC", so we don't blow away existing non-HDF5 file) */
if(fid_dst < 0)
fid_dst = H5Fcreate(fname_dst, H5F_ACC_EXCL, H5P_DEFAULT, H5P_DEFAULT);
/*-------------------------------------------------------------------------
* test for error in opening output file
*-------------------------------------------------------------------------*/
if (fid_dst==-1)
{
error_msg("Could not open output file <%s>...Exiting\n", fname_dst);
leave(EXIT_FAILURE);
}
/*-------------------------------------------------------------------------
* print some info
*-------------------------------------------------------------------------*/
if (verbose)
{
printf("Copying file <%s> and object <%s> to file <%s> and object <%s>\n",
fname_src, oname_src, fname_dst, oname_dst);
if (flag) {
HDassert(str_flag);
printf("Using %s flag\n", str_flag);
}
}
/*-------------------------------------------------------------------------
* create property lists for copy
*-------------------------------------------------------------------------*/
/* create property to pass copy options */
if ( (ocpl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0)
goto error;
/* set options for object copy */
if (flag)
{
if ( H5Pset_copy_object(ocpl_id, flag) < 0)
goto error;
}
/* Create link creation property list */
if((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) {
error_msg("Could not create link creation property list\n");
goto error;
} /* end if */
/* Check for creating intermediate groups */
if(parents) {
/* Set the intermediate group creation property */
if(H5Pset_create_intermediate_group(lcpl_id, 1) < 0) {
error_msg("Could not set property for creating parent groups\n");
goto error;
} /* end if */
/* Display some output if requested */
if(verbose)
printf("%s: Creating parent groups\n", h5tools_getprogname());
} /* end if */
else /* error, if parent groups doesn't already exist in destination file */
{
size_t i, len;
len = HDstrlen(oname_dst);
/* check if all the parents groups exist. skip root group */
for (i = 1; i < len; i++)
{
if ('/'==oname_dst[i])
{
char *str_ptr;
str_ptr = (char *)HDcalloc(i + 1, sizeof(char));
HDstrncpy(str_ptr, oname_dst, i);
str_ptr[i]='\0';
if (H5Lexists(fid_dst, str_ptr, H5P_DEFAULT) <= 0)
{
error_msg("group <%s> doesn't exist. Use -p to create parent groups.\n", str_ptr);
HDfree(str_ptr);
goto error;
}
HDfree(str_ptr);
}
}
}
/*-------------------------------------------------------------------------
* do the copy
*-------------------------------------------------------------------------*/
if(verbose)
linkinfo.opt.msg_mode = 1;
li_ret = H5tools_get_symlink_info(fid_src, oname_src, &linkinfo, 1);
if (li_ret == 0) /* dangling link */
{
if(H5Lcopy(fid_src, oname_src,
fid_dst, oname_dst,
H5P_DEFAULT, H5P_DEFAULT) < 0)
goto error;
}
else /* valid link */
{
if (H5Ocopy(fid_src, /* Source file or group identifier */
oname_src, /* Name of the source object to be copied */
fid_dst, /* Destination file or group identifier */
oname_dst, /* Name of the destination object */
ocpl_id, /* Object copy property list */
lcpl_id)<0) /* Link creation property list */
goto error;
}
/* free link info path */
if (linkinfo.trg_path)
HDfree(linkinfo.trg_path);
/* close propertis */
if(H5Pclose(ocpl_id)<0)
goto error;
if(H5Pclose(lcpl_id)<0)
goto error;
/* close files */
if (H5Fclose(fid_src)<0)
goto error;
if (H5Fclose(fid_dst)<0)
goto error;
leave(EXIT_SUCCESS);
error:
printf("Error in copy...Exiting\n");
/* free link info path */
if (linkinfo.trg_path)
HDfree(linkinfo.trg_path);
H5E_BEGIN_TRY {
H5Pclose(ocpl_id);
H5Pclose(lcpl_id);
H5Fclose(fid_src);
H5Fclose(fid_dst);
} H5E_END_TRY;
leave(EXIT_FAILURE);
}
