static Exonerate_Server *Exonerate_Server_create(gchar *input_path,
gboolean preload,
gint verbosity){
register Exonerate_Server *exonerate_server
= g_new0(Exonerate_Server, 1);
if(verbosity > 0)
g_message("Starting server ...");
if(Dataset_check_filetype(input_path)){
exonerate_server->dataset = Dataset_read(input_path);
} else if(Index_check_filetype(input_path)){
exonerate_server->index = Index_open(input_path);
exonerate_server->dataset
= Dataset_share(exonerate_server->index->dataset);
if(preload)
Index_preload_index(exonerate_server->index);
} else {
g_error("Unknown filetype for input file [%s]", input_path);
}
if(preload)
Dataset_preload_seqs(exonerate_server->dataset);
exonerate_server->verbosity = verbosity;
if(verbosity >= 1){
Dataset_info(exonerate_server->dataset);
Index_info(exonerate_server->index);
}
return exonerate_server;
}
bool synaxErrorJudger::isSynaxErrorInCreateIndex()
{
if (!createIndexRe.match(sqlExp).hasMatch())
return true;
if (keyWord.find(sqlExp.section(' ', 2, 2, QString::SectionSkipEmpty).trimmed().toStdString())
!= keyWord.end()) {
return true;
}
string indexName = sqlExp.section(' ', 2, 2, QString::SectionSkipEmpty).trimmed().toStdString();
int begin = sqlExp.indexOf(QRegExp("\\bon\\b")) + 3;
int end = sqlExp.indexOf('(', begin) - 1;
string tableName = sqlExp.mid(begin, end - begin + 1).trimmed().toStdString();
begin = end + 2;
end = sqlExp.indexOf(')', begin) - 1;
string attributeName = sqlExp.mid(begin, end - begin + 1).trimmed().toStdString();
if (iInfo == 0) {
iInfo = new Index_info(indexName, attributeName, tableName);
}
else {
*iInfo = Index_info(indexName, attributeName, tableName);
}
return false;
}
