void printOdes_fromFile(char* filename)
{
if (filename == NULL)
return;
int i;
char *formula;
variableIndex_t *vi = NULL;
odeModel_t *model =
ODEModel_createFromFile(filename);
if (model == NULL)
{
printf("create odemodel fails:\n");
return;
}
/* Get some information from constructed odeModel */
printf("\n\n");
printf("ODE Model Statistics:\n");
printf("Number of ODEs: %d\n",
ODEModel_getNeq(model));
printf("Number of Assignments: %d\n",
ODEModel_getNumAssignments(model));
printf("Number of Constants: %d\n",
ODEModel_getNumConstants(model));
printf(" ____\n");
printf("Total number of values: %d\n",
ODEModel_getNumValues(model));
printf("\n");
printf("ODEs:\n");
for ( i=0; i<ODEModel_getNeq(model); i++ ){
vi = ODEModel_getOdeVariableIndex(model, i);
formula = SBML_formulaToString(ODEModel_getOde(model, vi));
printf("d[%s]/dt = %s \n", ODEModel_getVariableName(model, vi), formula);
free(formula);
VariableIndex_free(vi);
}
// printf("Assigned Variables:\n");
// for ( i=0; i<ODEModel_getNumAssignments(model); i++ ){
// vi = ODEModel_getAssignedVariableIndex(model, i);
// formula = SBML_formulaToString(ODEModel_getOde(model, vi));
// printf("%s = %s \n", ODEModel_getVariableName(model, vi), formula);
// free(formula);
// VariableIndex_free(vi);
// }
printf("Constants:\n");
for ( i=0; i<ODEModel_getNumConstants(model); i++ ){
vi = ODEModel_getConstantIndex(model, i);
printf("%s\n", ODEModel_getVariableName(model, vi));
VariableIndex_free(vi);
}
printf("\n\n");
ODEModel_free(model);
}
int main(void)
{
int i;
char *formula;
variableIndex_t *vi = NULL;
odeModel_t *model =
ODEModel_createFromFile("basic-model1-forward-l2.xml");
/* Get some information from constructed odeModel */
printf("\n\n");
printf("ODE Model Statistics:\n");
printf("Number of ODEs: %d\n",
ODEModel_getNeq(model));
printf("Number of Assignments: %d\n",
ODEModel_getNumAssignments(model));
printf("Number of Constants: %d\n",
ODEModel_getNumConstants(model));
printf(" ____\n");
printf("Total number of values: %d\n",
ODEModel_getNumValues(model));
printf("\n");
printf("ODEs:\n");
for ( i=0; i<ODEModel_getNeq(model); i++ ){
vi = ODEModel_getOdeVariableIndex(model, i);
formula = SBML_formulaToString(ODEModel_getOde(model, vi));
printf("d[%s]/dt = %s \n", ODEModel_getVariableName(model, vi), formula);
free(formula);
VariableIndex_free(vi);
}
printf("Assigned Variables:\n");
for ( i=0; i<ODEModel_getNumAssignments(model); i++ ){
vi = ODEModel_getAssignedVariableIndex(model, i);
formula = SBML_formulaToString(ODEModel_getOde(model, vi));
printf("%s = %s \n", ODEModel_getVariableName(model, vi), formula);
free(formula);
VariableIndex_free(vi);
}
printf("Constants:\n");
for ( i=0; i<ODEModel_getNumConstants(model); i++ ){
vi = ODEModel_getConstantIndex(model, i);
printf("%s\n", ODEModel_getVariableName(model, vi));
VariableIndex_free(vi);
}
printf("\n\n");
ODEModel_free(model);
return 1;
}
