PetscErrorCode Parameter_settings(AppCtx *user)
{
PetscErrorCode ierr;
PetscBool flg;
PetscFunctionBeginUser;
/* Set default parameters */
user->ws = 1.0;
user->H = 5.0;
user->Pmax = 2.1;
user->PM_min = 1.0;
user->lambda = 0.1;
user->q = 1.0;
user->mux = PetscAsinScalar(user->PM_min/user->Pmax);
user->sigmax = 0.1;
user->sigmay = 0.1;
user->rho = 0.0;
user->xmin = -PETSC_PI;
user->xmax = PETSC_PI;
user->bx = DM_BOUNDARY_PERIODIC;
user->by = DM_BOUNDARY_MIRROR;
user->nonoiseinitial = PETSC_FALSE;
/*
ymin of -3 seems to let the unstable solution move up and leave a zero in its wake
with an ymin of -1 the wake is never exactly zero
*/
user->ymin = -3.0;
user->ymax = 10.0;
user->st_width = 1;
ierr = PetscOptionsGetScalar(NULL,"-ws",&user->ws,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-Inertia",&user->H,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-Pmax",&user->Pmax,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-PM_min",&user->PM_min,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-lambda",&user->lambda,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-q",&user->q,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-mux",&user->mux,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-sigmax",&user->sigmax,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-muy",&user->muy,&flg);CHKERRQ(ierr);
if (flg == 0) {
user->muy = user->ws;
}
ierr = PetscOptionsGetScalar(NULL,"-sigmay",&user->sigmay,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-rho",&user->rho,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-xmin",&user->xmin,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-xmax",&user->xmax,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-ymin",&user->ymin,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-ymax",&user->ymax,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetInt(NULL,"-stencil_width",&user->st_width,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetEnum(NULL,"-bx",DMBoundaryTypes,(PetscEnum*)&user->bx,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetEnum(NULL,"-by",DMBoundaryTypes,(PetscEnum*)&user->by,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetBool(NULL,"-nonoiseinitial",&user->nonoiseinitial,&flg);CHKERRQ(ierr);
PetscFunctionReturn(0);
}
PetscErrorCode Parameter_settings(AppCtx *user)
{
PetscErrorCode ierr;
PetscBool flg;
PetscFunctionBeginUser;
/* Set default parameters */
user->ws = 1.0;
user->H = 5.0;
user->D = 0.0;
user->Pmax = user->Pmax_s = 2.1;
user->PM_min = 1.0;
user->lambda = 0.1;
user->q = 1.0;
user->mux = PetscAsinScalar(user->PM_min/user->Pmax);
user->sigmax = 0.1;
user->sigmay = 0.1;
user->rho = 0.0;
user->xmin = -PETSC_PI;
user->xmax = PETSC_PI;
user->bx = DM_BOUNDARY_PERIODIC;
user->by = DM_BOUNDARY_GHOSTED;
user->tf = user->tcl = -1;
user->ymin = -2.0;
user->ymax = 2.0;
user->st_width = 1;
ierr = PetscOptionsGetScalar(NULL,"-ws",&user->ws,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-Inertia",&user->H,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-D",&user->D,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-Pmax",&user->Pmax,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-PM_min",&user->PM_min,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-lambda",&user->lambda,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-q",&user->q,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-mux",&user->mux,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-muy",&user->muy,&flg);CHKERRQ(ierr);
if (flg == 0) {
user->muy = user->ws;
}
ierr = PetscOptionsGetScalar(NULL,"-xmin",&user->xmin,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-xmax",&user->xmax,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-ymin",&user->ymin,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetScalar(NULL,"-ymax",&user->ymax,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetInt(NULL,"-stencil_width",&user->st_width,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetEnum("","-bx",BoundaryTypes,(PetscEnum*)&user->bx,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetEnum("","-by",BoundaryTypes,(PetscEnum*)&user->by,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetReal(NULL,"-tf",&user->tf,&flg);CHKERRQ(ierr);
ierr = PetscOptionsGetReal(NULL,"-tcl",&user->tcl,&flg);CHKERRQ(ierr);
PetscFunctionReturn(0);
}
int main(int argc,char **argv)
{
TS ts; /* ODE integrator */
Vec U; /* solution will be stored here */
Mat A; /* Jacobian matrix */
Mat Jacp; /* Jacobian matrix */
PetscErrorCode ierr;
PetscMPIInt size;
PetscInt n = 2;
AppCtx ctx;
PetscScalar *u;
PetscReal du[2] = {0.0,0.0};
PetscBool ensemble = PETSC_FALSE,flg1,flg2;
PetscReal ftime;
PetscInt steps;
PetscScalar *x_ptr,*y_ptr;
Vec lambda[1],q,mu[1];
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Initialize program
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = PetscInitialize(&argc,&argv,(char*)0,help);CHKERRQ(ierr);
ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);
if (size > 1) SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Only for sequential runs");
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Create necessary matrix and vectors
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
ierr = MatSetSizes(A,n,n,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr);
ierr = MatSetType(A,MATDENSE);CHKERRQ(ierr);
ierr = MatSetFromOptions(A);CHKERRQ(ierr);
ierr = MatSetUp(A);CHKERRQ(ierr);
ierr = MatCreateVecs(A,&U,NULL);CHKERRQ(ierr);
ierr = MatCreate(PETSC_COMM_WORLD,&Jacp);CHKERRQ(ierr);
ierr = MatSetSizes(Jacp,PETSC_DECIDE,PETSC_DECIDE,2,1);CHKERRQ(ierr);
ierr = MatSetFromOptions(Jacp);CHKERRQ(ierr);
ierr = MatSetUp(Jacp);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Set runtime options
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = PetscOptionsBegin(PETSC_COMM_WORLD,NULL,"Swing equation options","");CHKERRQ(ierr);
{
ctx.beta = 2;
ctx.c = 10000.0;
ctx.u_s = 1.0;
ctx.omega_s = 1.0;
ctx.omega_b = 120.0*PETSC_PI;
ctx.H = 5.0;
ierr = PetscOptionsScalar("-Inertia","","",ctx.H,&ctx.H,NULL);CHKERRQ(ierr);
ctx.D = 5.0;
ierr = PetscOptionsScalar("-D","","",ctx.D,&ctx.D,NULL);CHKERRQ(ierr);
ctx.E = 1.1378;
ctx.V = 1.0;
ctx.X = 0.545;
ctx.Pmax = ctx.E*ctx.V/ctx.X;;
ierr = PetscOptionsScalar("-Pmax","","",ctx.Pmax,&ctx.Pmax,NULL);CHKERRQ(ierr);
ctx.Pm = 1.1;
ierr = PetscOptionsScalar("-Pm","","",ctx.Pm,&ctx.Pm,NULL);CHKERRQ(ierr);
ctx.tf = 0.1;
ctx.tcl = 0.2;
ierr = PetscOptionsReal("-tf","Time to start fault","",ctx.tf,&ctx.tf,NULL);CHKERRQ(ierr);
ierr = PetscOptionsReal("-tcl","Time to end fault","",ctx.tcl,&ctx.tcl,NULL);CHKERRQ(ierr);
ierr = PetscOptionsBool("-ensemble","Run ensemble of different initial conditions","",ensemble,&ensemble,NULL);CHKERRQ(ierr);
if (ensemble) {
ctx.tf = -1;
ctx.tcl = -1;
}
ierr = VecGetArray(U,&u);CHKERRQ(ierr);
u[0] = PetscAsinScalar(ctx.Pm/ctx.Pmax);
u[1] = 1.0;
ierr = PetscOptionsRealArray("-u","Initial solution","",u,&n,&flg1);CHKERRQ(ierr);
n = 2;
ierr = PetscOptionsRealArray("-du","Perturbation in initial solution","",du,&n,&flg2);CHKERRQ(ierr);
u[0] += du[0];
u[1] += du[1];
ierr = VecRestoreArray(U,&u);CHKERRQ(ierr);
if (flg1 || flg2) {
ctx.tf = -1;
ctx.tcl = -1;
}
}
ierr = PetscOptionsEnd();CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Create timestepping solver context
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSCreate(PETSC_COMM_WORLD,&ts);CHKERRQ(ierr);
ierr = TSSetProblemType(ts,TS_NONLINEAR);CHKERRQ(ierr);
ierr = TSSetType(ts,TSRK);CHKERRQ(ierr);
ierr = TSSetRHSFunction(ts,NULL,(TSRHSFunction)RHSFunction,&ctx);CHKERRQ(ierr);
ierr = TSSetRHSJacobian(ts,A,A,(TSRHSJacobian)RHSJacobian,&ctx);CHKERRQ(ierr);
ierr = TSSetExactFinalTime(ts,TS_EXACTFINALTIME_MATCHSTEP);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Set initial conditions
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSSetSolution(ts,U);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Save trajectory of solution so that TSAdjointSolve() may be used
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSSetSaveTrajectory(ts);CHKERRQ(ierr);
ierr = MatCreateVecs(A,&lambda[0],NULL);CHKERRQ(ierr);
/* Set initial conditions for the adjoint integration */
ierr = VecGetArray(lambda[0],&y_ptr);CHKERRQ(ierr);
y_ptr[0] = 0.0; y_ptr[1] = 0.0;
ierr = VecRestoreArray(lambda[0],&y_ptr);CHKERRQ(ierr);
ierr = MatCreateVecs(Jacp,&mu[0],NULL);CHKERRQ(ierr);
ierr = VecGetArray(mu[0],&x_ptr);CHKERRQ(ierr);
x_ptr[0] = -1.0;
ierr = VecRestoreArray(mu[0],&x_ptr);CHKERRQ(ierr);
ierr = TSSetCostGradients(ts,1,lambda,mu);CHKERRQ(ierr);
ierr = TSSetCostIntegrand(ts,1,(PetscErrorCode (*)(TS,PetscReal,Vec,Vec,void*))CostIntegrand,
(PetscErrorCode (*)(TS,PetscReal,Vec,Vec*,void*))DRDYFunction,
(PetscErrorCode (*)(TS,PetscReal,Vec,Vec*,void*))DRDPFunction,PETSC_TRUE,&ctx);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Set solver options
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSSetDuration(ts,PETSC_DEFAULT,10.0);CHKERRQ(ierr);
ierr = TSSetExactFinalTime(ts,TS_EXACTFINALTIME_STEPOVER);CHKERRQ(ierr);
ierr = TSSetInitialTimeStep(ts,0.0,.01);CHKERRQ(ierr);
ierr = TSSetFromOptions(ts);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solve nonlinear system
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
if (ensemble) {
for (du[1] = -2.5; du[1] <= .01; du[1] += .1) {
ierr = VecGetArray(U,&u);CHKERRQ(ierr);
u[0] = PetscAsinScalar(ctx.Pm/ctx.Pmax);
u[1] = ctx.omega_s;
u[0] += du[0];
u[1] += du[1];
ierr = VecRestoreArray(U,&u);CHKERRQ(ierr);
ierr = TSSetInitialTimeStep(ts,0.0,.01);CHKERRQ(ierr);
ierr = TSSolve(ts,U);CHKERRQ(ierr);
}
} else {
ierr = TSSolve(ts,U);CHKERRQ(ierr);
}
ierr = VecView(U,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
ierr = TSGetSolveTime(ts,&ftime);CHKERRQ(ierr);
ierr = TSGetTimeStepNumber(ts,&steps);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Adjoint model starts here
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
/* Set initial conditions for the adjoint integration */
ierr = VecGetArray(lambda[0],&y_ptr);CHKERRQ(ierr);
y_ptr[0] = 0.0; y_ptr[1] = 0.0;
ierr = VecRestoreArray(lambda[0],&y_ptr);CHKERRQ(ierr);
ierr = VecGetArray(mu[0],&x_ptr);CHKERRQ(ierr);
x_ptr[0] = -1.0;
ierr = VecRestoreArray(mu[0],&x_ptr);CHKERRQ(ierr);
/* Set RHS JacobianP */
ierr = TSAdjointSetRHSJacobian(ts,Jacp,RHSJacobianP,&ctx);CHKERRQ(ierr);
ierr = TSAdjointSolve(ts);CHKERRQ(ierr);
ierr = PetscPrintf(PETSC_COMM_WORLD,"\n sensitivity wrt initial conditions: d[Psi(tf)]/d[phi0] d[Psi(tf)]/d[omega0]\n");CHKERRQ(ierr);
ierr = VecView(lambda[0],PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
ierr = VecView(mu[0],PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
ierr = TSGetCostIntegral(ts,&q);CHKERRQ(ierr);
ierr = VecView(q,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
ierr = VecGetArray(q,&x_ptr);CHKERRQ(ierr);
ierr = PetscPrintf(PETSC_COMM_WORLD,"\n cost function=%g\n",(double)(x_ptr[0]-ctx.Pm));CHKERRQ(ierr);
ierr = VecRestoreArray(q,&x_ptr);CHKERRQ(ierr);
ierr = ComputeSensiP(lambda[0],mu[0],&ctx);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Free work space. All PETSc objects should be destroyed when they are no longer needed.
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = MatDestroy(&A);CHKERRQ(ierr);
ierr = MatDestroy(&Jacp);CHKERRQ(ierr);
ierr = VecDestroy(&U);CHKERRQ(ierr);
ierr = VecDestroy(&lambda[0]);CHKERRQ(ierr);
ierr = VecDestroy(&mu[0]);CHKERRQ(ierr);
ierr = TSDestroy(&ts);CHKERRQ(ierr);
ierr = PetscFinalize();
return(0);
}
int main(int argc,char **argv)
{
TS ts; /* ODE integrator */
Vec U; /* solution will be stored here */
Mat A; /* Jacobian matrix */
PetscErrorCode ierr;
PetscMPIInt size;
PetscInt n = 2;
AppCtx ctx;
PetscScalar *u;
PetscReal du[2] = {0.0,0.0};
PetscBool ensemble = PETSC_FALSE,flg1,flg2;
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Initialize program
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = PetscInitialize(&argc,&argv,(char*)0,help);CHKERRQ(ierr);
ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);
if (size > 1) SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Only for sequential runs");
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Create necessary matrix and vectors
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
ierr = MatSetSizes(A,n,n,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr);
ierr = MatSetType(A,MATDENSE);CHKERRQ(ierr);
ierr = MatSetFromOptions(A);CHKERRQ(ierr);
ierr = MatSetUp(A);CHKERRQ(ierr);
ierr = MatCreateVecs(A,&U,NULL);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Set runtime options
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = PetscOptionsBegin(PETSC_COMM_WORLD,NULL,"Swing equation options","");CHKERRQ(ierr);
{
ctx.omega_s = 2.0*PETSC_PI*60.0;
ctx.H = 5.0;
ierr = PetscOptionsScalar("-Inertia","","",ctx.H,&ctx.H,NULL);CHKERRQ(ierr);
ctx.D = 5.0;
ierr = PetscOptionsScalar("-D","","",ctx.D,&ctx.D,NULL);CHKERRQ(ierr);
ctx.E = 1.1378;
ctx.V = 1.0;
ctx.X = 0.545;
ctx.Pmax = ctx.E*ctx.V/ctx.X;;
ierr = PetscOptionsScalar("-Pmax","","",ctx.Pmax,&ctx.Pmax,NULL);CHKERRQ(ierr);
ctx.Pm = 0.9;
ierr = PetscOptionsScalar("-Pm","","",ctx.Pm,&ctx.Pm,NULL);CHKERRQ(ierr);
ctx.tf = 1.0;
ctx.tcl = 1.05;
ierr = PetscOptionsReal("-tf","Time to start fault","",ctx.tf,&ctx.tf,NULL);CHKERRQ(ierr);
ierr = PetscOptionsReal("-tcl","Time to end fault","",ctx.tcl,&ctx.tcl,NULL);CHKERRQ(ierr);
ierr = PetscOptionsBool("-ensemble","Run ensemble of different initial conditions","",ensemble,&ensemble,NULL);CHKERRQ(ierr);
if (ensemble) {
ctx.tf = -1;
ctx.tcl = -1;
}
ierr = VecGetArray(U,&u);CHKERRQ(ierr);
u[0] = PetscAsinScalar(ctx.Pm/ctx.Pmax);
u[1] = 1.0;
ierr = PetscOptionsRealArray("-u","Initial solution","",u,&n,&flg1);CHKERRQ(ierr);
n = 2;
ierr = PetscOptionsRealArray("-du","Perturbation in initial solution","",du,&n,&flg2);CHKERRQ(ierr);
u[0] += du[0];
u[1] += du[1];
ierr = VecRestoreArray(U,&u);CHKERRQ(ierr);
if (flg1 || flg2) {
ctx.tf = -1;
ctx.tcl = -1;
}
}
ierr = PetscOptionsEnd();CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Create timestepping solver context
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSCreate(PETSC_COMM_WORLD,&ts);CHKERRQ(ierr);
ierr = TSSetProblemType(ts,TS_NONLINEAR);CHKERRQ(ierr);
ierr = TSSetType(ts,TSROSW);CHKERRQ(ierr);
ierr = TSSetIFunction(ts,NULL,(TSIFunction) IFunction,&ctx);CHKERRQ(ierr);
ierr = TSSetIJacobian(ts,A,A,(TSIJacobian)IJacobian,&ctx);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Set initial conditions
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSSetSolution(ts,U);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Set solver options
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSSetDuration(ts,100000,35.0);CHKERRQ(ierr);
ierr = TSSetInitialTimeStep(ts,0.0,.01);CHKERRQ(ierr);
ierr = TSSetFromOptions(ts);CHKERRQ(ierr);
/* ierr = TSSetPostStep(ts,PostStep);CHKERRQ(ierr); */
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solve nonlinear system
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
if (ensemble) {
for (du[1] = -2.5; du[1] <= .01; du[1] += .1) {
ierr = VecGetArray(U,&u);CHKERRQ(ierr);
u[0] = PetscAsinScalar(ctx.Pm/ctx.Pmax);
u[1] = ctx.omega_s;
u[0] += du[0];
u[1] += du[1];
ierr = VecRestoreArray(U,&u);CHKERRQ(ierr);
ierr = TSSetInitialTimeStep(ts,0.0,.01);CHKERRQ(ierr);
ierr = TSSolve(ts,U);CHKERRQ(ierr);
}
} else {
ierr = TSSolve(ts,U);CHKERRQ(ierr);
}
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Free work space. All PETSc objects should be destroyed when they are no longer needed.
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = MatDestroy(&A);CHKERRQ(ierr);
ierr = VecDestroy(&U);CHKERRQ(ierr);
ierr = TSDestroy(&ts);CHKERRQ(ierr);
ierr = PetscFinalize();
return(0);
}
/*
FormFunction - Evaluates the function and corresponding gradient.
Input Parameters:
tao - the Tao context
X - the input vector
ptr - optional user-defined context, as set by TaoSetObjectiveAndGradientRoutine()
Output Parameters:
f - the newly evaluated function
*/
PetscErrorCode FormFunction(Tao tao,Vec P,PetscReal *f,void *ctx0)
{
AppCtx *ctx = (AppCtx*)ctx0;
TS ts;
Vec U; /* solution will be stored here */
Mat A; /* Jacobian matrix */
Mat Jacp; /* Jacobian matrix */
PetscErrorCode ierr;
PetscInt n = 2;
PetscReal ftime;
PetscInt steps;
PetscScalar *u;
PetscScalar *x_ptr,*y_ptr;
Vec lambda[1],q,mu[1];
ierr = VecGetArray(P,&x_ptr);CHKERRQ(ierr);
ctx->Pm = x_ptr[0];
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Create necessary matrix and vectors
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
ierr = MatSetSizes(A,n,n,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr);
ierr = MatSetType(A,MATDENSE);CHKERRQ(ierr);
ierr = MatSetFromOptions(A);CHKERRQ(ierr);
ierr = MatSetUp(A);CHKERRQ(ierr);
ierr = MatCreateVecs(A,&U,NULL);CHKERRQ(ierr);
ierr = MatCreate(PETSC_COMM_WORLD,&Jacp);CHKERRQ(ierr);
ierr = MatSetSizes(Jacp,PETSC_DECIDE,PETSC_DECIDE,2,1);CHKERRQ(ierr);
ierr = MatSetFromOptions(Jacp);CHKERRQ(ierr);
ierr = MatSetUp(Jacp);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Create timestepping solver context
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSCreate(PETSC_COMM_WORLD,&ts);CHKERRQ(ierr);
ierr = TSSetProblemType(ts,TS_NONLINEAR);CHKERRQ(ierr);
ierr = TSSetType(ts,TSBEULER);CHKERRQ(ierr);
ierr = TSSetIFunction(ts,NULL,(TSIFunction) IFunction,ctx);CHKERRQ(ierr);
ierr = TSSetIJacobian(ts,A,A,(TSIJacobian)IJacobian,ctx);CHKERRQ(ierr);
ierr = TSSetExactFinalTime(ts,TS_EXACTFINALTIME_MATCHSTEP);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Set initial conditions
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = VecGetArray(U,&u);CHKERRQ(ierr);
u[0] = PetscAsinScalar(ctx->Pm/ctx->Pmax);
u[1] = 1.0;
ierr = VecRestoreArray(U,&u);CHKERRQ(ierr);
ierr = TSSetSolution(ts,U);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Save trajectory of solution so that TSAdjointSolve() may be used
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSSetSaveTrajectory(ts);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Set solver options
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSSetDuration(ts,PETSC_DEFAULT,10.0);CHKERRQ(ierr);
ierr = TSSetInitialTimeStep(ts,0.0,.01);CHKERRQ(ierr);
ierr = TSSetFromOptions(ts);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solve nonlinear system
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = TSSolve(ts,U);CHKERRQ(ierr);
ierr = TSGetSolveTime(ts,&ftime);CHKERRQ(ierr);
ierr = TSGetTimeStepNumber(ts,&steps);CHKERRQ(ierr);
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Adjoint model starts here
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = MatCreateVecs(A,&lambda[0],NULL);CHKERRQ(ierr);
/* Set initial conditions for the adjoint integration */
ierr = VecGetArray(lambda[0],&y_ptr);CHKERRQ(ierr);
y_ptr[0] = 0.0; y_ptr[1] = 0.0;
ierr = VecRestoreArray(lambda[0],&y_ptr);CHKERRQ(ierr);
ierr = MatCreateVecs(Jacp,&mu[0],NULL);CHKERRQ(ierr);
ierr = VecGetArray(mu[0],&x_ptr);CHKERRQ(ierr);
x_ptr[0] = -1.0;
ierr = VecRestoreArray(mu[0],&x_ptr);CHKERRQ(ierr);
ierr = TSAdjointSetCostGradients(ts,1,lambda,mu);CHKERRQ(ierr);
ierr = TSAdjointSetRHSJacobian(ts,Jacp,RHSJacobianP,ctx);CHKERRQ(ierr);
ierr = TSAdjointSetCostIntegrand(ts,1,(PetscErrorCode (*)(TS,PetscReal,Vec,Vec,void*))CostIntegrand,
(PetscErrorCode (*)(TS,PetscReal,Vec,Vec*,void*))DRDYFunction,
(PetscErrorCode (*)(TS,PetscReal,Vec,Vec*,void*))DRDPFunction,ctx);CHKERRQ(ierr);
ierr = TSAdjointSolve(ts);CHKERRQ(ierr);
ierr = TSAdjointGetCostIntegral(ts,&q);CHKERRQ(ierr);
ierr = ComputeSensiP(lambda[0],mu[0],ctx);CHKERRQ(ierr);
ierr = VecGetArray(q,&x_ptr);CHKERRQ(ierr);
*f = -ctx->Pm + x_ptr[0];
/* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Free work space. All PETSc objects should be destroyed when they are no longer needed.
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
ierr = MatDestroy(&A);CHKERRQ(ierr);
ierr = MatDestroy(&Jacp);CHKERRQ(ierr);
ierr = VecDestroy(&U);CHKERRQ(ierr);
ierr = VecDestroy(&lambda[0]);CHKERRQ(ierr);
ierr = VecDestroy(&mu[0]);CHKERRQ(ierr);
ierr = TSDestroy(&ts);CHKERRQ(ierr);
return 0;
}
