コード例 #1
0
ファイル: common.c プロジェクト: Alanchi/numpy
NPY_NO_EXPORT int
_IsAligned(PyArrayObject *ap)
{
    unsigned int i, aligned = 1;
    const unsigned int alignment = PyArray_DESCR(ap)->alignment;

    /* The special casing for STRING and VOID types was removed
     * in accordance with http://projects.scipy.org/numpy/ticket/1227
     * It used to be that IsAligned always returned True for these
     * types, which is indeed the case when they are created using
     * PyArray_DescrConverter(), but not necessarily when using
     * PyArray_DescrAlignConverter(). */

    if (alignment == 1) {
        return 1;
    }
    aligned = npy_is_aligned(PyArray_DATA(ap), alignment);

    for (i = 0; i < PyArray_NDIM(ap); i++) {
#if NPY_RELAXED_STRIDES_CHECKING
        if (PyArray_DIM(ap, i) > 1) {
            /* if shape[i] == 1, the stride is never used */
            aligned &= npy_is_aligned((void*)PyArray_STRIDES(ap)[i],
                                      alignment);
        }
        else if (PyArray_DIM(ap, i) == 0) {
            /* an array with zero elements is always aligned */
            return 1;
        }
#else /* not NPY_RELAXED_STRIDES_CHECKING */
        aligned &= npy_is_aligned((void*)PyArray_STRIDES(ap)[i], alignment);
#endif /* not NPY_RELAXED_STRIDES_CHECKING */
    }
    return aligned != 0;
}
コード例 #2
0
ファイル: flagsobject.c プロジェクト: balarsen/numpy
/* 0-strided arrays are not contiguous (even if dimension == 1) */
static int
_IsFortranContiguous(PyArrayObject *ap)
{
    npy_intp sd;
    npy_intp dim;
    int i;

    if (PyArray_NDIM(ap) == 0) {
        return 1;
    }
    sd = PyArray_DESCR(ap)->elsize;
    if (PyArray_NDIM(ap) == 1) {
        return PyArray_DIMS(ap)[0] == 1 || sd == PyArray_STRIDES(ap)[0];
    }
    for (i = 0; i < PyArray_NDIM(ap); ++i) {
        dim = PyArray_DIMS(ap)[i];
        /* fortran contiguous by definition */
        if (dim == 0) {
            return 1;
        }
        if (PyArray_STRIDES(ap)[i] != sd) {
            return 0;
        }
        sd *= dim;
    }
    return 1;
}
コード例 #3
0
ファイル: common.c プロジェクト: Dimitris0mg/numpy
NPY_NO_EXPORT int
_IsAligned(PyArrayObject *ap)
{
    unsigned int i;
    npy_uintp aligned;
    npy_uintp alignment = PyArray_DESCR(ap)->alignment;

    /* alignment 1 types should have a efficient alignment for copy loops */
    if (PyArray_ISFLEXIBLE(ap) || PyArray_ISSTRING(ap)) {
        alignment = 16;
    }

    if (alignment == 1) {
        return 1;
    }
    aligned = (npy_uintp)PyArray_DATA(ap);

    for (i = 0; i < PyArray_NDIM(ap); i++) {
#if NPY_RELAXED_STRIDES_CHECKING
        /* skip dim == 1 as it is not required to have stride 0 */
        if (PyArray_DIM(ap, i) > 1) {
            /* if shape[i] == 1, the stride is never used */
            aligned |= (npy_uintp)PyArray_STRIDES(ap)[i];
        }
        else if (PyArray_DIM(ap, i) == 0) {
            /* an array with zero elements is always aligned */
            return 1;
        }
#else /* not NPY_RELAXED_STRIDES_CHECKING */
        aligned |= (npy_uintp)PyArray_STRIDES(ap)[i];
#endif /* not NPY_RELAXED_STRIDES_CHECKING */
    }
    return npy_is_aligned((void *)aligned, alignment);
}
コード例 #4
0
ファイル: blas.c プロジェクト: robwarm/gpaw-symm
PyObject* r2k(PyObject *self, PyObject *args)
{
  Py_complex alpha;
  PyArrayObject* a;
  PyArrayObject* b;
  double beta;
  PyArrayObject* c;
  if (!PyArg_ParseTuple(args, "DOOdO", &alpha, &a, &b, &beta, &c))
    return NULL;
  int n = PyArray_DIMS(a)[0];
  int k = PyArray_DIMS(a)[1];
  for (int d = 2; d < PyArray_NDIM(a); d++)
    k *= PyArray_DIMS(a)[d];
  int ldc = PyArray_STRIDES(c)[0] / PyArray_STRIDES(c)[1];
  if (PyArray_DESCR(a)->type_num == NPY_DOUBLE)
    dsyr2k_("u", "t", &n, &k,
            (double*)(&alpha), DOUBLEP(a), &k,
            DOUBLEP(b), &k, &beta,
            DOUBLEP(c), &ldc);
  else
    zher2k_("u", "c", &n, &k,
            (void*)(&alpha), (void*)COMPLEXP(a), &k,
            (void*)COMPLEXP(b), &k, &beta,
            (void*)COMPLEXP(c), &ldc);
  Py_RETURN_NONE;
}
コード例 #5
0
ファイル: blas.c プロジェクト: robwarm/gpaw-symm
PyObject* gemm(PyObject *self, PyObject *args)
{
  Py_complex alpha;
  PyArrayObject* a;
  PyArrayObject* b;
  Py_complex beta;
  PyArrayObject* c;
  char transa = 'n';
  if (!PyArg_ParseTuple(args, "DOODO|c", &alpha, &a, &b, &beta, &c, &transa))
    return NULL;
  int m, k, lda, ldb, ldc;
  if (transa == 'n')
    {
      m = PyArray_DIMS(a)[1];
      for (int i = 2; i < PyArray_NDIM(a); i++)
        m *= PyArray_DIMS(a)[i];
      k = PyArray_DIMS(a)[0];
      lda = MAX(1, PyArray_STRIDES(a)[0] / PyArray_STRIDES(a)[PyArray_NDIM(a) - 1]);
      ldb = MAX(1, PyArray_STRIDES(b)[0] / PyArray_STRIDES(b)[1]);
      ldc = MAX(1, PyArray_STRIDES(c)[0] / PyArray_STRIDES(c)[PyArray_NDIM(c) - 1]);
    }
  else
    {
      k = PyArray_DIMS(a)[1];
      for (int i = 2; i < PyArray_NDIM(a); i++)
        k *= PyArray_DIMS(a)[i];
      m = PyArray_DIMS(a)[0];
      lda = MAX(1, k);
      ldb = MAX(1, PyArray_STRIDES(b)[0] / PyArray_STRIDES(b)[PyArray_NDIM(b) - 1]);
      ldc = MAX(1, PyArray_STRIDES(c)[0] / PyArray_STRIDES(c)[1]);

    }
  int n = PyArray_DIMS(b)[0];
  if (PyArray_DESCR(a)->type_num == NPY_DOUBLE)
    dgemm_(&transa, "n", &m, &n, &k,
           &(alpha.real),
           DOUBLEP(a), &lda,
           DOUBLEP(b), &ldb,
           &(beta.real),
           DOUBLEP(c), &ldc);
  else
    zgemm_(&transa, "n", &m, &n, &k,
           &alpha,
           (void*)COMPLEXP(a), &lda,
           (void*)COMPLEXP(b), &ldb,
           &beta,
           (void*)COMPLEXP(c), &ldc);
  Py_RETURN_NONE;
}
コード例 #6
0
ファイル: gdkpixbuf2numpy.cpp プロジェクト: Data-link/mypaint
PyObject *
gdkpixbuf_get_pixels_array(PyObject *pixbuf_pyobject)
{
    GdkPixbuf *pixbuf = GDK_PIXBUF(((PyGObject *)pixbuf_pyobject)->obj);
    PyArrayObject *array;
    npy_intp dims[3] = { 0, 0, 3 };

    dims[0] = gdk_pixbuf_get_height(pixbuf);
    dims[1] = gdk_pixbuf_get_width(pixbuf);

    if (gdk_pixbuf_get_has_alpha(pixbuf))
        dims[2] = 4;
    guchar *pixels = gdk_pixbuf_get_pixels(pixbuf);

    array = (PyArrayObject *)PyArray_SimpleNewFromData(3, dims, NPY_UBYTE,
                                                       pixels);

    if (array == NULL)
        return NULL;

    PyArray_STRIDES(array)[0] = gdk_pixbuf_get_rowstride(pixbuf);
    // the array holds a ref to the pixbuf pixels through this wrapper
    Py_INCREF(pixbuf_pyobject);

#ifdef NPY_1_7_API_VERSION
    PyArray_SetBaseObject(array, (PyObject *)pixbuf_pyobject);
#else
    array->base = (PyObject *)pixbuf_pyobject;
#endif

    return PyArray_Return(array);
}
コード例 #7
0
ファイル: array_assign.c プロジェクト: anntzer/numpy
NPY_NO_EXPORT int
IsAligned(PyArrayObject *ap)
{
    return raw_array_is_aligned(PyArray_NDIM(ap), PyArray_DIMS(ap),
                                PyArray_DATA(ap), PyArray_STRIDES(ap),
                                PyArray_DESCR(ap)->alignment);
}
コード例 #8
0
ファイル: array_assign.c プロジェクト: Komnomnomnom/numpy
/* Gets a half-open range [start, end) which contains the array data */
NPY_NO_EXPORT void
get_array_memory_extents(PyArrayObject *arr,
                    npy_uintp *out_start, npy_uintp *out_end)
{
    npy_uintp start, end;
    npy_intp idim, ndim = PyArray_NDIM(arr);
    npy_intp *dimensions = PyArray_DIMS(arr),
            *strides = PyArray_STRIDES(arr);

    /* Calculate with a closed range [start, end] */
    start = end = (npy_uintp)PyArray_DATA(arr);
    for (idim = 0; idim < ndim; ++idim) {
        npy_intp stride = strides[idim], dim = dimensions[idim];
        /* If the array size is zero, return an empty range */
        if (dim == 0) {
            *out_start = *out_end = (npy_uintp)PyArray_DATA(arr);
            return;
        }
        /* Expand either upwards or downwards depending on stride */
        else {
            if (stride > 0) {
                end += stride*(dim-1);
            }
            else if (stride < 0) {
                start += stride*(dim-1);
            }
        }
    }

    /* Return a half-open range */
    *out_start = start;
    *out_end = end + PyArray_DESCR(arr)->elsize;
}
コード例 #9
0
ファイル: array_assign.c プロジェクト: anntzer/numpy
NPY_NO_EXPORT int
IsUintAligned(PyArrayObject *ap)
{
    return raw_array_is_aligned(PyArray_NDIM(ap), PyArray_DIMS(ap),
                                PyArray_DATA(ap), PyArray_STRIDES(ap),
                                npy_uint_alignment(PyArray_DESCR(ap)->elsize));
}
コード例 #10
0
int getStrides( void* arr, int* strides ) {
	npy_intp* np_dims = PyArray_STRIDES( arr );
	int i;
	for( i=0; i<getNDim( arr ); i++ ) {
		strides[i] = (int)np_dims[i];
	}
	return 0;
}
コード例 #11
0
ファイル: common.c プロジェクト: naghmouchi/numpy
NPY_NO_EXPORT int
_IsAligned(PyArrayObject *ap)
{
    unsigned int i;
    npy_uintp aligned;
    npy_uintp alignment = PyArray_DESCR(ap)->alignment;

    /* alignment 1 types should have a efficient alignment for copy loops */
    if (PyArray_ISFLEXIBLE(ap) || PyArray_ISSTRING(ap)) {
        npy_intp itemsize = PyArray_ITEMSIZE(ap);
        /* power of two sizes may be loaded in larger moves */
        if (((itemsize & (itemsize - 1)) == 0)) {
            alignment = itemsize > NPY_MAX_COPY_ALIGNMENT ?
                NPY_MAX_COPY_ALIGNMENT : itemsize;
        }
        else {
            /* if not power of two it will be accessed bytewise */
            alignment = 1;
        }
    }

    if (alignment == 1) {
        return 1;
    }
    aligned = (npy_uintp)PyArray_DATA(ap);

    for (i = 0; i < PyArray_NDIM(ap); i++) {
#if NPY_RELAXED_STRIDES_CHECKING
        /* skip dim == 1 as it is not required to have stride 0 */
        if (PyArray_DIM(ap, i) > 1) {
            /* if shape[i] == 1, the stride is never used */
            aligned |= (npy_uintp)PyArray_STRIDES(ap)[i];
        }
        else if (PyArray_DIM(ap, i) == 0) {
            /* an array with zero elements is always aligned */
            return 1;
        }
#else /* not NPY_RELAXED_STRIDES_CHECKING */
        aligned |= (npy_uintp)PyArray_STRIDES(ap)[i];
#endif /* not NPY_RELAXED_STRIDES_CHECKING */
    }
    return npy_is_aligned((void *)aligned, alignment);
}
コード例 #12
0
ファイル: blas.c プロジェクト: robwarm/gpaw-symm
PyObject* gemv(PyObject *self, PyObject *args)
{
  Py_complex alpha;
  PyArrayObject* a;
  PyArrayObject* x;
  Py_complex beta;
  PyArrayObject* y;
  char trans = 't';
  if (!PyArg_ParseTuple(args, "DOODO|c", &alpha, &a, &x, &beta, &y, &trans))
    return NULL;

  int m, n, lda, itemsize, incx, incy;

  if (trans == 'n')
    {
      m = PyArray_DIMS(a)[1];
      for (int i = 2; i < PyArray_NDIM(a); i++)
        m *= PyArray_DIMS(a)[i];
      n = PyArray_DIMS(a)[0];
      lda = MAX(1, m);
    }
  else
    {
      n = PyArray_DIMS(a)[0];
      for (int i = 1; i < PyArray_NDIM(a)-1; i++)
        n *= PyArray_DIMS(a)[i];
      m = PyArray_DIMS(a)[PyArray_NDIM(a)-1];
      lda = MAX(1, m);
    }

  if (PyArray_DESCR(a)->type_num == NPY_DOUBLE)
    itemsize = sizeof(double);
  else
    itemsize = sizeof(double_complex);

  incx = PyArray_STRIDES(x)[0]/itemsize;
  incy = 1;

  if (PyArray_DESCR(a)->type_num == NPY_DOUBLE)
    dgemv_(&trans, &m, &n,
           &(alpha.real),
           DOUBLEP(a), &lda,
           DOUBLEP(x), &incx,
           &(beta.real),
           DOUBLEP(y), &incy);
  else
    zgemv_(&trans, &m, &n,
           &alpha,
           (void*)COMPLEXP(a), &lda,
           (void*)COMPLEXP(x), &incx,
           &beta,
           (void*)COMPLEXP(y), &incy);
  Py_RETURN_NONE;
}
コード例 #13
0
	UMatData* allocate(PyObject* o, int dims, const int* sizes, int type,
			size_t* step) const {
		UMatData* u = new UMatData(this);
		u->data = u->origdata = (uchar*) PyArray_DATA((PyArrayObject*) o);
		npy_intp* _strides = PyArray_STRIDES((PyArrayObject*) o);
		for (int i = 0; i < dims - 1; i++)
			step[i] = (size_t) _strides[i];
		step[dims - 1] = CV_ELEM_SIZE(type);
		u->size = sizes[0] * step[0];
		u->userdata = o;
		return u;
	}
コード例 #14
0
ファイル: iconic.c プロジェクト: Garyfallidis/nipy
void local_histogram(double* H, 
		     unsigned int clamp, 
		     PyArrayIterObject* iter, 
		     const unsigned int* size)
{
  PyArrayObject *block, *im = iter->ao; 
  PyArrayIterObject* block_iter; 
  unsigned int i, left, right, center, halfsize, dim, offset=0; 
  npy_intp block_dims[3];

  UPDATE_ITERATOR_COORDS(iter); 

  /* Compute block corners */ 
  for (i=0; i<3; i++) {
    center = iter->coordinates[i];
    halfsize = size[i]/2; 
    dim = PyArray_DIM(im, i);
  
    /* Left handside corner */ 
    if (center<halfsize)
      left = 0; 
    else
      left = center-halfsize; 

    /* Right handside corner (plus one)*/ 
    right = center+halfsize+1; 
    if (right>dim) 
      right = dim; 

    /* Block properties */ 
    offset += left*PyArray_STRIDE(im, i); 
    block_dims[i] = right-left;

  }

  /* Create the block as a vew and the block iterator */ 
  block = (PyArrayObject*)PyArray_New(&PyArray_Type, 3, block_dims, 
				      PyArray_TYPE(im), PyArray_STRIDES(im), 
				      (void*)(PyArray_DATA(im)+offset), 
				      PyArray_ITEMSIZE(im),
				      NPY_BEHAVED, NULL);
  block_iter = (PyArrayIterObject*)PyArray_IterNew((PyObject*)block); 

  /* Compute block histogram */ 
  histogram(H, clamp, block_iter); 

  /* Free memory */ 
  Py_XDECREF(block_iter); 
  Py_XDECREF(block); 

  return; 
}		     
コード例 #15
0
ファイル: BallTree.cpp プロジェクト: GunioRobot/scikit-learn
//initialization of BallTree object
// argument is a single array of size [D,N]
static int
BallTree_init(BallTreeObject *self, PyObject *args, PyObject *kwds){
  //we use goto statements : all variables should be declared up front
    PyObject *arg=NULL;
    PyObject *arr=NULL;
    long int leaf_size=20;

    static char *kwlist[] = {"x", "leafsize", NULL};

    if (!PyArg_ParseTupleAndKeywords(args, kwds, "O|l", kwlist,
        &arg,&leaf_size) )
        goto fail;

    if(leaf_size <= 0){
        PyErr_SetString(PyExc_ValueError,
            "BallTree : leaf size must be greater than zero");
        goto fail;
    }

  //view this object as an array of doubles,
    arr = PyArray_FROM_OTF(arg,NPY_DOUBLE,0);
    if(arr==NULL)
        goto fail;

  //check that it is 2D
    if( PyArray_NDIM(arr) != 2)
        goto fail;

    if(self != NULL){
    //create the list of points
        self->size = PyArray_DIMS(arr)[0];
        self->dim = PyArray_DIMS(arr)[1];

        int inc = PyArray_STRIDES(arr)[1]/PyArray_DESCR(arr)->elsize;
        self->Points = new std::vector<BallTree_Point*>(self->size);
        for(int i=0;i<self->size;i++)
            self->Points->at(i) = new BallTree_Point(arr,
            (double*)PyArray_GETPTR2(arr,i,0),
            inc, PyArray_DIM(arr,1));
        self->tree = new BallTree<BallTree_Point>(*(self->Points),
            leaf_size);
    }
    self->data = arr;
  //Py_DECREF(arr);
    return 0;

    fail:
    Py_XDECREF(arr);
    return -1;
}
コード例 #16
0
ファイル: blas.c プロジェクト: robwarm/gpaw-symm
PyObject* rk(PyObject *self, PyObject *args)
{
    double alpha;
    PyArrayObject* a;
    double beta;
    PyArrayObject* c;
    char trans = 'c';
    if (!PyArg_ParseTuple(args, "dOdO|c", &alpha, &a, &beta, &c, &trans))
        return NULL;

    int n = PyArray_DIMS(c)[0];
    
    int k, lda;
    
    if (trans == 'c') {
        k = PyArray_DIMS(a)[1];
        for (int d = 2; d < PyArray_NDIM(a); d++)
            k *= PyArray_DIMS(a)[d];
        lda = k;
    }
    else {
        k = PyArray_DIMS(a)[0];
        lda = n;
    }
    
    int ldc = PyArray_STRIDES(c)[0] / PyArray_STRIDES(c)[1];
    if (PyArray_DESCR(a)->type_num == NPY_DOUBLE)
        dsyrk_("u", &trans, &n, &k,
               &alpha, DOUBLEP(a), &lda, &beta,
               DOUBLEP(c), &ldc);
    else
        zherk_("u", &trans, &n, &k,
               &alpha, (void*)COMPLEXP(a), &lda, &beta,
               (void*)COMPLEXP(c), &ldc);
    Py_RETURN_NONE;
}
コード例 #17
0
ファイル: _dotblas.c プロジェクト: jadolfbr/Pymol-script-repo
/* This also makes sure that the data segment is aligned with
   an itemsize address as well by returning one if not true.
*/
static int
_bad_strides(PyArrayObject *ap)
{
    register int itemsize = PyArray_ITEMSIZE(ap);
    register int i, N=PyArray_NDIM(ap);
    register intp *strides = PyArray_STRIDES(ap);

    if (((intp)(ap->data) % itemsize) != 0)
        return 1;
    for (i=0; i<N; i++) {
        if ((strides[i] < 0) || (strides[i] % itemsize) != 0)
            return 1;
    }

    return 0;
}
コード例 #18
0
ファイル: buffer.c プロジェクト: Benj1/numpy
/* Fill in the info structure */
static _buffer_info_t*
_buffer_info_new(PyArrayObject *arr)
{
    _buffer_info_t *info;
    _tmp_string_t fmt = {NULL, 0, 0};
    int k;

    info = malloc(sizeof(_buffer_info_t));
    if (info == NULL) {
        goto fail;
    }

    /* Fill in format */
    if (_buffer_format_string(PyArray_DESCR(arr), &fmt, arr, NULL, NULL) != 0) {
        free(fmt.s);
        goto fail;
    }
    _append_char(&fmt, '\0');
    info->format = fmt.s;

    /* Fill in shape and strides */
    info->ndim = PyArray_NDIM(arr);

    if (info->ndim == 0) {
        info->shape = NULL;
        info->strides = NULL;
    }
    else {
        info->shape = malloc(sizeof(Py_ssize_t) * PyArray_NDIM(arr) * 2 + 1);
        if (info->shape == NULL) {
            goto fail;
        }
        info->strides = info->shape + PyArray_NDIM(arr);
        for (k = 0; k < PyArray_NDIM(arr); ++k) {
            info->shape[k] = PyArray_DIMS(arr)[k];
            info->strides[k] = PyArray_STRIDES(arr)[k];
        }
    }

    return info;

fail:
    free(info);
    return NULL;
}
コード例 #19
0
ファイル: mem_overlap.c プロジェクト: Adward-R/numpy
/* Gets a half-open range [start, end) which contains the array data */
static void
get_array_memory_extents(PyArrayObject *arr,
                         npy_uintp *out_start, npy_uintp *out_end,
                         npy_uintp *num_bytes)
{
    npy_intp low, upper;
    int j;
    offset_bounds_from_strides(PyArray_ITEMSIZE(arr), PyArray_NDIM(arr),
                               PyArray_DIMS(arr), PyArray_STRIDES(arr),
                               &low, &upper);
    *out_start = (npy_uintp)PyArray_DATA(arr) + (npy_uintp)low;
    *out_end = (npy_uintp)PyArray_DATA(arr) + (npy_uintp)upper;

    *num_bytes = PyArray_ITEMSIZE(arr);
    for (j = 0; j < PyArray_NDIM(arr); ++j) {
        *num_bytes *= PyArray_DIM(arr, j);
    }
}
コード例 #20
0
ファイル: strfuncs.c プロジェクト: kenogo/numpy
static PyObject *
array_repr_builtin(PyArrayObject *self, int repr)
{
    PyObject *ret;
    char *string;
    /* max_n initial value is arbitrary, dump_data will extend it */
    Py_ssize_t n = 0, max_n = PyArray_NBYTES(self) * 4 + 7;

    if ((string = PyArray_malloc(max_n)) == NULL) {
        return PyErr_NoMemory();
    }

    if (dump_data(&string, &n, &max_n, PyArray_DATA(self),
                  PyArray_NDIM(self), PyArray_DIMS(self),
                  PyArray_STRIDES(self), self) < 0) {
        PyArray_free(string);
        return NULL;
    }

    if (repr) {
        if (PyArray_ISEXTENDED(self)) {
            ret = PyUString_FromFormat("array(%s, '%c%d')",
                                       string,
                                       PyArray_DESCR(self)->type,
                                       PyArray_DESCR(self)->elsize);
        }
        else {
            ret = PyUString_FromFormat("array(%s, '%c')",
                                       string,
                                       PyArray_DESCR(self)->type);
        }
    }
    else {
        ret = PyUString_FromStringAndSize(string, n);
    }

    PyArray_free(string);
    return ret;
}
コード例 #21
0
ファイル: common.c プロジェクト: balarsen/numpy
NPY_NO_EXPORT char *
index2ptr(PyArrayObject *mp, npy_intp i)
{
    npy_intp dim0;

    if (PyArray_NDIM(mp) == 0) {
        PyErr_SetString(PyExc_IndexError, "0-d arrays can't be indexed");
        return NULL;
    }
    dim0 = PyArray_DIMS(mp)[0];
    if (i < 0) {
        i += dim0;
    }
    if (i == 0 && dim0 > 0) {
        return PyArray_DATA(mp);
    }
    if (i > 0 && i < dim0) {
        return PyArray_DATA(mp)+i*PyArray_STRIDES(mp)[0];
    }
    PyErr_SetString(PyExc_IndexError,"index out of bounds");
    return NULL;
}
コード例 #22
0
ファイル: reduction.c プロジェクト: ChrisBarker-NOAA/numpy
/*
 * Allocates a result array for a reduction operation, with
 * dimensions matching 'arr' except set to 1 with 0 stride
 * wherever axis_flags is True. Dropping the reduction axes
 * from the result must be done later by the caller once the
 * computation is complete.
 *
 * This function always allocates a base class ndarray.
 *
 * If 'dtype' isn't NULL, this function steals its reference.
 */
static PyArrayObject *
allocate_reduce_result(PyArrayObject *arr, npy_bool *axis_flags,
                        PyArray_Descr *dtype, int subok)
{
    npy_intp strides[NPY_MAXDIMS], stride;
    npy_intp shape[NPY_MAXDIMS], *arr_shape = PyArray_DIMS(arr);
    npy_stride_sort_item strideperm[NPY_MAXDIMS];
    int idim, ndim = PyArray_NDIM(arr);

    if (dtype == NULL) {
        dtype = PyArray_DTYPE(arr);
        Py_INCREF(dtype);
    }

    PyArray_CreateSortedStridePerm(PyArray_NDIM(arr),
                                    PyArray_STRIDES(arr), strideperm);

    /* Build the new strides and shape */
    stride = dtype->elsize;
    memcpy(shape, arr_shape, ndim * sizeof(shape[0]));
    for (idim = ndim-1; idim >= 0; --idim) {
        npy_intp i_perm = strideperm[idim].perm;
        if (axis_flags[i_perm]) {
            strides[i_perm] = 0;
            shape[i_perm] = 1;
        }
        else {
            strides[i_perm] = stride;
            stride *= shape[i_perm];
        }
    }

    /* Finally, allocate the array */
    return (PyArrayObject *)PyArray_NewFromDescr(
                                    subok ? Py_TYPE(arr) : &PyArray_Type,
                                    dtype, ndim, shape, strides,
                                    NULL, 0, subok ? (PyObject *)arr : NULL);
}
コード例 #23
0
ファイル: _nrt_python.c プロジェクト: nikete/numba
static
PyObject* try_to_return_parent(arystruct_t *arystruct, int ndim,
                               PyArray_Descr *descr)
{
    int i;
    PyArrayObject *array = (PyArrayObject *)arystruct->parent;

    if (!PyArray_Check(arystruct->parent))
        /* Parent is a generic buffer-providing object */
        goto RETURN_ARRAY_COPY;

    if (PyArray_DATA(array) != arystruct->data)
        goto RETURN_ARRAY_COPY;

    if (PyArray_NDIM(array) != ndim)
        goto RETURN_ARRAY_COPY;

    if (PyObject_RichCompareBool((PyObject *) PyArray_DESCR(array),
                                 (PyObject *) descr, Py_EQ) <= 0)
        goto RETURN_ARRAY_COPY;

    for(i = 0; i < ndim; ++i) {
        if (PyArray_DIMS(array)[i] != arystruct->shape_and_strides[i])
            goto RETURN_ARRAY_COPY;
        if (PyArray_STRIDES(array)[i] != arystruct->shape_and_strides[ndim + i])
            goto RETURN_ARRAY_COPY;
    }

    /* Yes, it is the same array
       Return new reference */
    Py_INCREF((PyObject *)array);
    return (PyObject *)array;

RETURN_ARRAY_COPY:
    return NULL;
}
コード例 #24
0
ファイル: common.c プロジェクト: MrBago/numpy
NPY_NO_EXPORT int
_IsAligned(PyArrayObject *ap)
{
    int i, alignment, aligned = 1;
    npy_intp ptr;

    /* The special casing for STRING and VOID types was removed
     * in accordance with http://projects.scipy.org/numpy/ticket/1227
     * It used to be that IsAligned always returned True for these
     * types, which is indeed the case when they are created using
     * PyArray_DescrConverter(), but not necessarily when using
     * PyArray_DescrAlignConverter(). */

    alignment = PyArray_DESCR(ap)->alignment;
    if (alignment == 1) {
        return 1;
    }
    ptr = (npy_intp) PyArray_DATA(ap);
    aligned = (ptr % alignment) == 0;
    for (i = 0; i < PyArray_NDIM(ap); i++) {
        aligned &= ((PyArray_STRIDES(ap)[i] % alignment) == 0);
    }
    return aligned != 0;
}
コード例 #25
0
ファイル: reduction.c プロジェクト: ChrisBarker-NOAA/numpy
/*
 * Conforms an output parameter 'out' to have 'ndim' dimensions
 * with dimensions of size one added in the appropriate places
 * indicated by 'axis_flags'.
 *
 * The return value is a view into 'out'.
 */
static PyArrayObject *
conform_reduce_result(int ndim, npy_bool *axis_flags,
                      PyArrayObject *out, int keepdims, const char *funcname,
                      int need_copy)
{
    npy_intp strides[NPY_MAXDIMS], shape[NPY_MAXDIMS];
    npy_intp *strides_out = PyArray_STRIDES(out);
    npy_intp *shape_out = PyArray_DIMS(out);
    int idim, idim_out, ndim_out = PyArray_NDIM(out);
    PyArray_Descr *dtype;
    PyArrayObject_fields *ret;

    /*
     * If the 'keepdims' parameter is true, do a simpler validation and
     * return a new reference to 'out'.
     */
    if (keepdims) {
        if (PyArray_NDIM(out) != ndim) {
            PyErr_Format(PyExc_ValueError,
                    "output parameter for reduction operation %s "
                    "has the wrong number of dimensions (must match "
                    "the operand's when keepdims=True)", funcname);
            return NULL;
        }

        for (idim = 0; idim < ndim; ++idim) {
            if (axis_flags[idim]) {
                if (shape_out[idim] != 1) {
                    PyErr_Format(PyExc_ValueError,
                            "output parameter for reduction operation %s "
                            "has a reduction dimension not equal to one "
                            "(required when keepdims=True)", funcname);
                    return NULL;
                }
            }
        }

        Py_INCREF(out);
        return out;
    }

    /* Construct the strides and shape */
    idim_out = 0;
    for (idim = 0; idim < ndim; ++idim) {
        if (axis_flags[idim]) {
            strides[idim] = 0;
            shape[idim] = 1;
        }
        else {
            if (idim_out >= ndim_out) {
                PyErr_Format(PyExc_ValueError,
                        "output parameter for reduction operation %s "
                        "does not have enough dimensions", funcname);
                return NULL;
            }
            strides[idim] = strides_out[idim_out];
            shape[idim] = shape_out[idim_out];
            ++idim_out;
        }
    }

    if (idim_out != ndim_out) {
        PyErr_Format(PyExc_ValueError,
                "output parameter for reduction operation %s "
                "has too many dimensions", funcname);
        return NULL;
    }

    /* Allocate the view */
    dtype = PyArray_DESCR(out);
    Py_INCREF(dtype);

    ret = (PyArrayObject_fields *)PyArray_NewFromDescr(&PyArray_Type,
                               dtype,
                               ndim, shape,
                               strides,
                               PyArray_DATA(out),
                               PyArray_FLAGS(out),
                               NULL);
    if (ret == NULL) {
        return NULL;
    }

    Py_INCREF(out);
    if (PyArray_SetBaseObject((PyArrayObject *)ret, (PyObject *)out) < 0) {
        Py_DECREF(ret);
        return NULL;
    }

    if (need_copy) {
        PyArrayObject *ret_copy;

        ret_copy = (PyArrayObject *)PyArray_NewLikeArray(
            (PyArrayObject *)ret, NPY_ANYORDER, NULL, 0);
        if (ret_copy == NULL) {
            Py_DECREF(ret);
            return NULL;
        }

        if (PyArray_CopyInto(ret_copy, (PyArrayObject *)ret) != 0) {
            Py_DECREF(ret);
            Py_DECREF(ret_copy);
            return NULL;
        }

        Py_INCREF(ret);
        if (PyArray_SetWritebackIfCopyBase(ret_copy, (PyArrayObject *)ret) < 0) {
            Py_DECREF(ret);
            Py_DECREF(ret_copy);
            return NULL;
        }

        return ret_copy;
    }
    else {
        return (PyArrayObject *)ret;
    }
}
コード例 #26
0
ファイル: compiled_base.c プロジェクト: aniryou/numpy
/*
 * Returns input array with values inserted sequentially into places
 * indicated by the mask
 */
NPY_NO_EXPORT PyObject *
arr_insert(PyObject *NPY_UNUSED(self), PyObject *args, PyObject *kwdict)
{
    PyObject *mask = NULL, *vals = NULL;
    PyArrayObject *ainput = NULL, *amask = NULL, *avals = NULL, *tmp = NULL;
    int numvals, totmask, sameshape;
    char *input_data, *mptr, *vptr, *zero = NULL;
    int melsize, delsize, nd, objarray, k;
    npy_intp *instrides, *inshape;

    static char *kwlist[] = {"input", "mask", "vals", NULL};

    if (!PyArg_ParseTupleAndKeywords(args, kwdict, "O&OO", kwlist,
                PyArray_Converter, &ainput,
                &mask, &vals)) {
        goto fail;
    }

    amask = (PyArrayObject *)PyArray_FROM_OF(mask, NPY_ARRAY_CARRAY);
    if (amask == NULL) {
        goto fail;
    }
    /* Cast an object array */
    if (PyArray_DESCR(amask)->type_num == NPY_OBJECT) {
        tmp = (PyArrayObject *)PyArray_Cast(amask, NPY_INTP);
        if (tmp == NULL) {
            goto fail;
        }
        Py_DECREF(amask);
        amask = tmp;
    }

    sameshape = 1;
    if (PyArray_NDIM(amask) == PyArray_NDIM(ainput)) {
        for (k = 0; k < PyArray_NDIM(amask); k++) {
            if (PyArray_DIMS(amask)[k] != PyArray_DIMS(ainput)[k]) {
                sameshape = 0;
            }
        }
    }
    else {
        /* Test to see if amask is 1d */
        if (PyArray_NDIM(amask) != 1) {
            sameshape = 0;
        }
        else if ((PyArray_SIZE(ainput)) != PyArray_SIZE(amask)) {
            sameshape = 0;
        }
    }
    if (!sameshape) {
        PyErr_SetString(PyExc_TypeError,
                        "mask array must be 1-d or same shape as input array");
        goto fail;
    }

    avals = (PyArrayObject *)PyArray_FromObject(vals,
                                        PyArray_DESCR(ainput)->type_num, 0, 1);
    if (avals == NULL) {
        goto fail;
    }
    numvals = PyArray_SIZE(avals);
    nd = PyArray_NDIM(ainput);
    input_data = PyArray_DATA(ainput);
    mptr = PyArray_DATA(amask);
    melsize = PyArray_DESCR(amask)->elsize;
    vptr = PyArray_DATA(avals);
    delsize = PyArray_DESCR(avals)->elsize;
    zero = PyArray_Zero(amask);
    if (zero == NULL) {
        goto fail;
    }
    objarray = (PyArray_DESCR(ainput)->type_num == NPY_OBJECT);

    if (!numvals) {
        /* nothing to insert! fail unless none of mask is true */
        const char *iter = mptr;
        const char *const last = iter + PyArray_NBYTES(amask);
        while (iter != last && !memcmp(iter, zero, melsize)) {
            iter += melsize;
        }
        if (iter != last) {
            PyErr_SetString(PyExc_ValueError,
                    "Cannot insert from an empty array!");
            goto fail;
        }
        goto finish;
    }

    /* Handle zero-dimensional case separately */
    if (nd == 0) {
        if (memcmp(mptr,zero,melsize) != 0) {
            /* Copy value element over to input array */
            memcpy(input_data,vptr,delsize);
            if (objarray) {
                Py_INCREF(*((PyObject **)vptr));
            }
        }
        Py_DECREF(amask);
        Py_DECREF(avals);
        PyDataMem_FREE(zero);
        Py_DECREF(ainput);
        Py_RETURN_NONE;
    }

    totmask = (int) PyArray_SIZE(amask);
    instrides = PyArray_STRIDES(ainput);
    inshape = PyArray_DIMS(ainput);
    if (objarray) {
        /* object array, need to refcount, can't release the GIL */
        arr_insert_loop(mptr, vptr, input_data, zero, PyArray_DATA(avals),
                        melsize, delsize, objarray, totmask, numvals, nd,
                        instrides, inshape);
    }
    else {
        /* No increfs take place in arr_insert_loop, so release the GIL */
        NPY_BEGIN_ALLOW_THREADS;
        arr_insert_loop(mptr, vptr, input_data, zero, PyArray_DATA(avals),
                        melsize, delsize, objarray, totmask, numvals, nd,
                        instrides, inshape);
        NPY_END_ALLOW_THREADS;
    }

finish:
    Py_DECREF(amask);
    Py_DECREF(avals);
    PyDataMem_FREE(zero);
    Py_DECREF(ainput);
    Py_RETURN_NONE;

fail:
    PyDataMem_FREE(zero);
    Py_XDECREF(ainput);
    Py_XDECREF(amask);
    Py_XDECREF(avals);
    return NULL;
}
コード例 #27
0
ファイル: reduction.c プロジェクト: ChrisBarker-NOAA/numpy
/*
 * This function initializes a result array for a reduction operation
 * which has no identity. This means it needs to copy the first element
 * it sees along the reduction axes to result, then return a view of
 * the operand which excludes that element.
 *
 * If a reduction has an identity, such as 0 or 1, the result should be
 * initialized by calling PyArray_AssignZero(result, NULL, NULL) or
 * PyArray_AssignOne(result, NULL, NULL), because this function raises an
 * exception when there are no elements to reduce (which appropriate iff the
 * reduction operation has no identity).
 *
 * This means it copies the subarray indexed at zero along each reduction axis
 * into 'result', then returns a view into 'operand' excluding those copied
 * elements.
 *
 * result  : The array into which the result is computed. This must have
 *           the same number of dimensions as 'operand', but for each
 *           axis i where 'axis_flags[i]' is True, it has a single element.
 * operand : The array being reduced.
 * axis_flags : An array of boolean flags, one for each axis of 'operand'.
 *              When a flag is True, it indicates to reduce along that axis.
 * reorderable : If True, the reduction being done is reorderable, which
 *               means specifying multiple axes of reduction at once is ok,
 *               and the reduction code may calculate the reduction in an
 *               arbitrary order. The calculation may be reordered because
 *               of cache behavior or multithreading requirements.
 * out_skip_first_count : This gets populated with the number of first-visit
 *                        elements that should be skipped during the
 *                        iteration loop.
 * funcname : The name of the reduction operation, for the purpose of
 *            better quality error messages. For example, "numpy.max"
 *            would be a good name for NumPy's max function.
 *
 * Returns a view which contains the remaining elements on which to do
 * the reduction.
 */
NPY_NO_EXPORT PyArrayObject *
PyArray_InitializeReduceResult(
                    PyArrayObject *result, PyArrayObject *operand,
                    npy_bool *axis_flags, int reorderable,
                    npy_intp *out_skip_first_count, const char *funcname)
{
    npy_intp *strides, *shape, shape_orig[NPY_MAXDIMS];
    PyArrayObject *op_view = NULL;
    int idim, ndim, nreduce_axes;

    ndim = PyArray_NDIM(operand);

    /* Default to no skipping first-visit elements in the iteration */
    *out_skip_first_count = 0;

    /*
     * If this reduction is non-reorderable, make sure there are
     * only 0 or 1 axes in axis_flags.
     */
    if (!reorderable && check_nonreorderable_axes(ndim,
                                    axis_flags, funcname) < 0) {
        return NULL;
    }

    /* Take a view into 'operand' which we can modify. */
    op_view = (PyArrayObject *)PyArray_View(operand, NULL, &PyArray_Type);
    if (op_view == NULL) {
        return NULL;
    }

    /*
     * Now copy the subarray of the first element along each reduction axis,
     * then return a view to the rest.
     *
     * Adjust the shape to only look at the first element along
     * any of the reduction axes. We count the number of reduction axes
     * at the same time.
     */
    shape = PyArray_SHAPE(op_view);
    nreduce_axes = 0;
    memcpy(shape_orig, shape, ndim * sizeof(npy_intp));
    for (idim = 0; idim < ndim; ++idim) {
        if (axis_flags[idim]) {
            if (shape[idim] == 0) {
                PyErr_Format(PyExc_ValueError,
                             "zero-size array to reduction operation %s "
                             "which has no identity",
                             funcname);
                Py_DECREF(op_view);
                return NULL;
            }
            shape[idim] = 1;
            ++nreduce_axes;
        }
    }

    /*
     * Copy the elements into the result to start.
     */
    if (PyArray_CopyInto(result, op_view) < 0) {
        Py_DECREF(op_view);
        return NULL;
    }

    /*
     * If there is one reduction axis, adjust the view's
     * shape to only look at the remaining elements
     */
    if (nreduce_axes == 1) {
        strides = PyArray_STRIDES(op_view);
        for (idim = 0; idim < ndim; ++idim) {
            if (axis_flags[idim]) {
                shape[idim] = shape_orig[idim] - 1;
                ((PyArrayObject_fields *)op_view)->data += strides[idim];
            }
        }
    }
    /* If there are zero reduction axes, make the view empty */
    else if (nreduce_axes == 0) {
        for (idim = 0; idim < ndim; ++idim) {
            shape[idim] = 0;
        }
    }
    /*
     * Otherwise iterate over the whole operand, but tell the inner loop
     * to skip the elements we already copied by setting the skip_first_count.
     */
    else {
        *out_skip_first_count = PyArray_SIZE(result);

        Py_DECREF(op_view);
        Py_INCREF(operand);
        op_view = operand;
    }

    return op_view;
}
コード例 #28
0
ファイル: common.c プロジェクト: JStech/numpy
NPY_NO_EXPORT int
PyArray_DTypeFromObjectHelper(PyObject *obj, int maxdims,
                              PyArray_Descr **out_dtype, int string_type)
{
    int i, size;
    PyArray_Descr *dtype = NULL;
    PyObject *ip;
    Py_buffer buffer_view;

    /* Check if it's an ndarray */
    if (PyArray_Check(obj)) {
        dtype = PyArray_DESCR((PyArrayObject *)obj);
        Py_INCREF(dtype);
        goto promote_types;
    }

    /* See if it's a python None */
    if (obj == Py_None) {
        dtype = PyArray_DescrFromType(NPY_OBJECT);
        if (dtype == NULL) {
            goto fail;
        }
        Py_INCREF(dtype);
        goto promote_types;
    }
    /* Check if it's a NumPy scalar */
    else if (PyArray_IsScalar(obj, Generic)) {
        if (!string_type) {
            dtype = PyArray_DescrFromScalar(obj);
            if (dtype == NULL) {
                goto fail;
            }
        }
        else {
            int itemsize;
            PyObject *temp;

            if (string_type == NPY_STRING) {
                if ((temp = PyObject_Str(obj)) == NULL) {
                    return -1;
                }
#if defined(NPY_PY3K)
    #if PY_VERSION_HEX >= 0x03030000
                itemsize = PyUnicode_GetLength(temp);
    #else
                itemsize = PyUnicode_GET_SIZE(temp);
    #endif
#else
                itemsize = PyString_GET_SIZE(temp);
#endif
            }
            else if (string_type == NPY_UNICODE) {
#if defined(NPY_PY3K)
                if ((temp = PyObject_Str(obj)) == NULL) {
#else
                if ((temp = PyObject_Unicode(obj)) == NULL) {
#endif
                    return -1;
                }
                itemsize = PyUnicode_GET_DATA_SIZE(temp);
#ifndef Py_UNICODE_WIDE
                itemsize <<= 1;
#endif
            }
            else {
                goto fail;
            }
            Py_DECREF(temp);
            if (*out_dtype != NULL &&
                    (*out_dtype)->type_num == string_type &&
                    (*out_dtype)->elsize >= itemsize) {
                return 0;
            }
            dtype = PyArray_DescrNewFromType(string_type);
            if (dtype == NULL) {
                goto fail;
            }
            dtype->elsize = itemsize;
        }
        goto promote_types;
    }

    /* Check if it's a Python scalar */
    dtype = _array_find_python_scalar_type(obj);
    if (dtype != NULL) {
        if (string_type) {
            int itemsize;
            PyObject *temp;

            if (string_type == NPY_STRING) {
                if ((temp = PyObject_Str(obj)) == NULL) {
                    return -1;
                }
#if defined(NPY_PY3K)
    #if PY_VERSION_HEX >= 0x03030000
                itemsize = PyUnicode_GetLength(temp);
    #else
                itemsize = PyUnicode_GET_SIZE(temp);
    #endif
#else
                itemsize = PyString_GET_SIZE(temp);
#endif
            }
            else if (string_type == NPY_UNICODE) {
#if defined(NPY_PY3K)
                if ((temp = PyObject_Str(obj)) == NULL) {
#else
                if ((temp = PyObject_Unicode(obj)) == NULL) {
#endif
                    return -1;
                }
                itemsize = PyUnicode_GET_DATA_SIZE(temp);
#ifndef Py_UNICODE_WIDE
                itemsize <<= 1;
#endif
            }
            else {
                goto fail;
            }
            Py_DECREF(temp);
            if (*out_dtype != NULL &&
                    (*out_dtype)->type_num == string_type &&
                    (*out_dtype)->elsize >= itemsize) {
                return 0;
            }
            dtype = PyArray_DescrNewFromType(string_type);
            if (dtype == NULL) {
                goto fail;
            }
            dtype->elsize = itemsize;
        }
        goto promote_types;
    }

    /* Check if it's an ASCII string */
    if (PyBytes_Check(obj)) {
        int itemsize = PyString_GET_SIZE(obj);

        /* If it's already a big enough string, don't bother type promoting */
        if (*out_dtype != NULL &&
                        (*out_dtype)->type_num == NPY_STRING &&
                        (*out_dtype)->elsize >= itemsize) {
            return 0;
        }
        dtype = PyArray_DescrNewFromType(NPY_STRING);
        if (dtype == NULL) {
            goto fail;
        }
        dtype->elsize = itemsize;
        goto promote_types;
    }

    /* Check if it's a Unicode string */
    if (PyUnicode_Check(obj)) {
        int itemsize = PyUnicode_GET_DATA_SIZE(obj);
#ifndef Py_UNICODE_WIDE
        itemsize <<= 1;
#endif

        /*
         * If it's already a big enough unicode object,
         * don't bother type promoting
         */
        if (*out_dtype != NULL &&
                        (*out_dtype)->type_num == NPY_UNICODE &&
                        (*out_dtype)->elsize >= itemsize) {
            return 0;
        }
        dtype = PyArray_DescrNewFromType(NPY_UNICODE);
        if (dtype == NULL) {
            goto fail;
        }
        dtype->elsize = itemsize;
        goto promote_types;
    }

    /* PEP 3118 buffer interface */
    if (PyObject_CheckBuffer(obj) == 1) {
        memset(&buffer_view, 0, sizeof(Py_buffer));
        if (PyObject_GetBuffer(obj, &buffer_view,
                               PyBUF_FORMAT|PyBUF_STRIDES) == 0 ||
            PyObject_GetBuffer(obj, &buffer_view, PyBUF_FORMAT) == 0) {

            PyErr_Clear();
            dtype = _descriptor_from_pep3118_format(buffer_view.format);
            PyBuffer_Release(&buffer_view);
            if (dtype) {
                goto promote_types;
            }
        }
        else if (PyObject_GetBuffer(obj, &buffer_view, PyBUF_STRIDES) == 0 ||
                 PyObject_GetBuffer(obj, &buffer_view, PyBUF_SIMPLE) == 0) {

            PyErr_Clear();
            dtype = PyArray_DescrNewFromType(NPY_VOID);
            dtype->elsize = buffer_view.itemsize;
            PyBuffer_Release(&buffer_view);
            goto promote_types;
        }
        else {
            PyErr_Clear();
        }
    }

    /* The array interface */
    ip = PyArray_GetAttrString_SuppressException(obj, "__array_interface__");
    if (ip != NULL) {
        if (PyDict_Check(ip)) {
            PyObject *typestr;
#if defined(NPY_PY3K)
            PyObject *tmp = NULL;
#endif
            typestr = PyDict_GetItemString(ip, "typestr");
#if defined(NPY_PY3K)
            /* Allow unicode type strings */
            if (PyUnicode_Check(typestr)) {
                tmp = PyUnicode_AsASCIIString(typestr);
                typestr = tmp;
            }
#endif
            if (typestr && PyBytes_Check(typestr)) {
                dtype =_array_typedescr_fromstr(PyBytes_AS_STRING(typestr));
#if defined(NPY_PY3K)
                if (tmp == typestr) {
                    Py_DECREF(tmp);
                }
#endif
                Py_DECREF(ip);
                if (dtype == NULL) {
                    goto fail;
                }
                goto promote_types;
            }
        }
        Py_DECREF(ip);
    }

    /* The array struct interface */
    ip = PyArray_GetAttrString_SuppressException(obj, "__array_struct__");
    if (ip != NULL) {
        PyArrayInterface *inter;
        char buf[40];

        if (NpyCapsule_Check(ip)) {
            inter = (PyArrayInterface *)NpyCapsule_AsVoidPtr(ip);
            if (inter->two == 2) {
                PyOS_snprintf(buf, sizeof(buf),
                        "|%c%d", inter->typekind, inter->itemsize);
                dtype = _array_typedescr_fromstr(buf);
                Py_DECREF(ip);
                if (dtype == NULL) {
                    goto fail;
                }
                goto promote_types;
            }
        }
        Py_DECREF(ip);
    }

    /* The old buffer interface */
#if !defined(NPY_PY3K)
    if (PyBuffer_Check(obj)) {
        dtype = PyArray_DescrNewFromType(NPY_VOID);
        if (dtype == NULL) {
            goto fail;
        }
        dtype->elsize = Py_TYPE(obj)->tp_as_sequence->sq_length(obj);
        PyErr_Clear();
        goto promote_types;
    }
#endif

    /* The __array__ attribute */
    ip = PyArray_GetAttrString_SuppressException(obj, "__array__");
    if (ip != NULL) {
        Py_DECREF(ip);
        ip = PyObject_CallMethod(obj, "__array__", NULL);
        if(ip && PyArray_Check(ip)) {
            dtype = PyArray_DESCR((PyArrayObject *)ip);
            Py_INCREF(dtype);
            Py_DECREF(ip);
            goto promote_types;
        }
        Py_XDECREF(ip);
        if (PyErr_Occurred()) {
            goto fail;
        }
    }

    /* Not exactly sure what this is about... */
#if !defined(NPY_PY3K)
    if (PyInstance_Check(obj)) {
        dtype = _use_default_type(obj);
        if (dtype == NULL) {
            goto fail;
        }
        else {
            goto promote_types;
        }
    }
#endif

    /*
     * If we reached the maximum recursion depth without hitting one
     * of the above cases, the output dtype should be OBJECT
     */
    if (maxdims == 0 || !PySequence_Check(obj)) {
        if (*out_dtype == NULL || (*out_dtype)->type_num != NPY_OBJECT) {
            Py_XDECREF(*out_dtype);
            *out_dtype = PyArray_DescrFromType(NPY_OBJECT);
            if (*out_dtype == NULL) {
                return -1;
            }
        }
        return 0;
    }

    /* Recursive case */
    size = PySequence_Size(obj);
    if (size < 0) {
        goto fail;
    }
    /* Recursive call for each sequence item */
    for (i = 0; i < size; ++i) {
        int res;
        ip = PySequence_GetItem(obj, i);
        if (ip == NULL) {
            goto fail;
        }
        res = PyArray_DTypeFromObjectHelper(ip, maxdims - 1,
                                            out_dtype, string_type);
        if (res < 0) {
            Py_DECREF(ip);
            goto fail;
        }
        else if (res > 0) {
            Py_DECREF(ip);
            return res;
        }
        Py_DECREF(ip);
    }

    return 0;


promote_types:
    /* Set 'out_dtype' if it's NULL */
    if (*out_dtype == NULL) {
        if (!string_type && dtype->type_num == NPY_STRING) {
            Py_DECREF(dtype);
            return RETRY_WITH_STRING;
        }
        if (!string_type && dtype->type_num == NPY_UNICODE) {
            Py_DECREF(dtype);
            return RETRY_WITH_UNICODE;
        }
        *out_dtype = dtype;
        return 0;
    }
    /* Do type promotion with 'out_dtype' */
    else {
        PyArray_Descr *res_dtype = PyArray_PromoteTypes(dtype, *out_dtype);
        Py_DECREF(dtype);
        if (res_dtype == NULL) {
            return -1;
        }
        if (!string_type &&
                res_dtype->type_num == NPY_UNICODE &&
                (*out_dtype)->type_num != NPY_UNICODE) {
            Py_DECREF(res_dtype);
            return RETRY_WITH_UNICODE;
        }
        if (!string_type &&
                res_dtype->type_num == NPY_STRING &&
                (*out_dtype)->type_num != NPY_STRING) {
            Py_DECREF(res_dtype);
            return RETRY_WITH_STRING;
        }
        Py_DECREF(*out_dtype);
        *out_dtype = res_dtype;
        return 0;
    }

fail:
    Py_XDECREF(*out_dtype);
    *out_dtype = NULL;
    return -1;
}

#undef RETRY_WITH_STRING
#undef RETRY_WITH_UNICODE

/* new reference */
NPY_NO_EXPORT PyArray_Descr *
_array_typedescr_fromstr(char *c_str)
{
    PyArray_Descr *descr = NULL;
    PyObject *stringobj = PyString_FromString(c_str);

    if (stringobj == NULL) {
        return NULL;
    }
    if (PyArray_DescrConverter(stringobj, &descr) != NPY_SUCCEED) {
        Py_DECREF(stringobj);
        return NULL;
    }
    Py_DECREF(stringobj);
    return descr;
}


NPY_NO_EXPORT char *
index2ptr(PyArrayObject *mp, npy_intp i)
{
    npy_intp dim0;

    if (PyArray_NDIM(mp) == 0) {
        PyErr_SetString(PyExc_IndexError, "0-d arrays can't be indexed");
        return NULL;
    }
    dim0 = PyArray_DIMS(mp)[0];
    if (check_and_adjust_index(&i, dim0, 0) < 0)
        return NULL;
    if (i == 0) {
        return PyArray_DATA(mp);
    }
    return PyArray_BYTES(mp)+i*PyArray_STRIDES(mp)[0];
}
コード例 #29
0
ファイル: stream_python.hpp プロジェクト: dkozel/uhd
static size_t wrap_send(uhd::tx_streamer *tx_stream,
                        bp::object &np_array,
                        bp::object &metadata,
                        const double timeout = 0.1)
{
    // Extract the metadata
    bp::extract<uhd::tx_metadata_t&> get_metadata(metadata);
    // TODO: throw an error here?
    if (not get_metadata.check())
    {
        return 0;
    }

    // Get a numpy array object from given python object
    // No sanity checking possible!
    // Note: this increases the ref count, which we'll need to manually decrease at the end
    PyObject* array_obj = PyArray_FROM_OF(np_array.ptr(),NPY_ARRAY_CARRAY);
    PyArrayObject* array_type_obj = reinterpret_cast<PyArrayObject*>(array_obj);

    // Get dimensions of the numpy array
    const size_t dims = PyArray_NDIM(array_type_obj);
    const npy_intp* shape = PyArray_SHAPE(array_type_obj);

    // How many bytes to jump to get to the next element of the stride
    // (next row)
    const npy_intp* strides = PyArray_STRIDES(array_type_obj);
    const size_t channels = tx_stream->get_num_channels();

    // Check if numpy array sizes are ok
    if (((channels > 1) && (dims != 2))
     or ((size_t) shape[0] < channels))
    {
        // Manually decrement the ref count
        Py_DECREF(array_obj);
        // If we don't have a 2D NumPy array, assume we have a 1D array
        size_t input_channels = (dims != 2) ? 1 : shape[0];
        throw uhd::runtime_error(str(boost::format(
            "Number of TX channels (%d) does not match the dimensions of the data array (%d)")
            % channels % input_channels));
    }

    // Get a pointer to the storage
    std::vector<void*> channel_storage;
    char* data = PyArray_BYTES(array_type_obj);
    for (size_t i = 0; i < channels; ++i)
    {
        channel_storage.push_back((void*)(data + i * strides[0]));
    }

    // Get data buffer and size of the array
    size_t nsamps_per_buff = (dims > 1) ? (size_t) shape[1] : PyArray_SIZE(array_type_obj);

    // Release the GIL only for the send() call
    const size_t result = [&]() {
        scoped_gil_release gil_release;
        // Call the real send()
        return tx_stream->send(
            channel_storage,
            nsamps_per_buff,
            get_metadata(),
            timeout
        );
    }();

    // Manually decrement the ref count
    Py_DECREF(array_obj);
    return result;
}
コード例 #30
0
ファイル: buffer.c プロジェクト: ales-erjavec/numpy
/* Fill in the info structure */
static _buffer_info_t*
_buffer_info_new(PyObject *obj)
{
    _buffer_info_t *info;
    _tmp_string_t fmt = {NULL, 0, 0};
    int k;
    PyArray_Descr *descr = NULL;
    int err = 0;

    info = malloc(sizeof(_buffer_info_t));
    if (info == NULL) {
        PyErr_NoMemory();
        goto fail;
    }

    if (PyArray_IsScalar(obj, Datetime) || PyArray_IsScalar(obj, Timedelta)) {
        /*
         * Special case datetime64 scalars to remain backward compatible.
         * This will change in a future version.
         * Note arrays of datetime64 and strutured arrays with datetime64
         * fields will not hit this code path and are currently unsupported
         * in _buffer_format_string.
         */
        if (_append_char(&fmt, 'B') < 0) {
            goto fail;
        }
        if (_append_char(&fmt, '\0') < 0) {
            goto fail;
        }
        info->ndim = 1;
        info->shape = malloc(sizeof(Py_ssize_t) * 2);
        if (info->shape == NULL) {
            PyErr_NoMemory();
            goto fail;
        }
        info->strides = info->shape + info->ndim;
        info->shape[0] = 8;
        info->strides[0] = 1;
        info->format = fmt.s;
        return info;
    }
    else if (PyArray_IsScalar(obj, Generic)) {
        descr = PyArray_DescrFromScalar(obj);
        if (descr == NULL) {
            goto fail;
        }
        info->ndim = 0;
        info->shape = NULL;
        info->strides = NULL;
    }
    else {
        PyArrayObject * arr = (PyArrayObject *)obj;
        descr = PyArray_DESCR(arr);
        /* Fill in shape and strides */
        info->ndim = PyArray_NDIM(arr);

        if (info->ndim == 0) {
            info->shape = NULL;
            info->strides = NULL;
        }
        else {
            info->shape = malloc(sizeof(Py_ssize_t) * PyArray_NDIM(arr) * 2 + 1);
            if (info->shape == NULL) {
                PyErr_NoMemory();
                goto fail;
            }
            info->strides = info->shape + PyArray_NDIM(arr);
            for (k = 0; k < PyArray_NDIM(arr); ++k) {
                info->shape[k] = PyArray_DIMS(arr)[k];
                info->strides[k] = PyArray_STRIDES(arr)[k];
            }
        }
        Py_INCREF(descr);
    }

    /* Fill in format */
    err = _buffer_format_string(descr, &fmt, obj, NULL, NULL);
    Py_DECREF(descr);
    if (err != 0) {
        goto fail;
    }
    if (_append_char(&fmt, '\0') < 0) {
        goto fail;
    }
    info->format = fmt.s;

    return info;

fail:
    free(fmt.s);
    free(info);
    return NULL;
}