void CGridCgiSampleApplication::x_SetupArgs() { // Disregard the case of CGI arguments SetRequestFlags(CCgiRequest::fCaseInsensitiveArgs); // Create CGI argument descriptions class // (For CGI applications only keys can be used) auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); // Specify USAGE context arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "CGI sample application"); // Describe possible cmd-line and HTTP entries // (optional) arg_desc->AddOptionalKey("message", "message", "Message passed to CGI application", CArgDescriptions::eString, CArgDescriptions::fAllowMultiple); arg_desc->AddOptionalKey("Cancel", "Cancel", "Cancel the job", CArgDescriptions::eString); // Setup arg.descriptions for this application SetupArgDescriptions(arg_desc.release()); }
void CDbapiDriverSampleApp::Init() { // Create command-line argument descriptions class auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); // Specify USAGE context arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "DBAPI Sample Application"); // Describe the expected command-line arguments arg_desc->AddDefaultKey("S", "server", "Name of the SQL server to connect to", CArgDescriptions::eString, m_DefaultServerName); arg_desc->AddDefaultKey("U", "username", "User name", CArgDescriptions::eString, "DBAPI_test"); arg_desc->AddDefaultKey("P", "password", "Password", CArgDescriptions::eString, "allowed"); arg_desc->AddDefaultKey("v", "version", "TDS protocol version", CArgDescriptions::eInteger, NStr::IntToString(m_DefaultTDSVersion)); // Setup arg.descriptions for this application SetupArgDescriptions(arg_desc.release()); }
void CDemoApp::Init() { // Create command-line argument descriptions class unique_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); // Specify USAGE context arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "MySQL Sample Application"); // Describe the expected command-line arguments arg_desc->AddKey("S", "server", "Name of the SQL server to connect to", CArgDescriptions::eString); arg_desc->AddDefaultKey("U", "username", "User name", CArgDescriptions::eString, "anyone"); arg_desc->AddDefaultKey("P", "password", "Password", CArgDescriptions::eString, "allowed"); arg_desc->AddKey("D", "database", "Name of a database", CArgDescriptions::eString); // Setup arg.descriptions for this application SetupArgDescriptions(arg_desc.release()); }
void CTestNSStorage::Init(void) { // Setup command line arguments and parameters // Create command-line argument descriptions class auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); // Specify USAGE context arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "NetSchedule storage"); arg_desc->AddPositional("service", "NetCache service name.", CArgDescriptions::eString); arg_desc->AddOptionalKey("protocol", "protocol", "NetCache client protocl", CArgDescriptions::eString); arg_desc->SetConstraint("protocol", &(*new CArgAllow_Strings(NStr::eNocase), "simple", "persistent") ); // Setup arg.descriptions for this application SetupArgDescriptions(arg_desc.release()); // CONNECT_Init(&GetConfig()); // SetDiagPostLevel(eDiag_Info); // SetDiagTrace(eDT_Enable); }
void CLocalFinderApp::Init(void) { // Prepare command line descriptions auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->AddKey("input", "FastaFile", "File containing FASTA-format sequence", CArgDescriptions::eInputFile); arg_desc->AddDefaultKey("from", "From", "From", CArgDescriptions::eInteger, "0"); arg_desc->AddDefaultKey("to", "To", "To", CArgDescriptions::eInteger, "1000000000"); arg_desc->AddKey("model", "ModelData", "Model Data", CArgDescriptions::eInputFile); arg_desc->AddOptionalKey("align", "Alignments", "Alignments", CArgDescriptions::eInputFile); arg_desc->AddFlag("rep", "Repeats"); // Pass argument descriptions to the application // SetupArgDescriptions(arg_desc.release()); }
void CTest::Init(void) { const size_t kUsageWidth = 90; SetDiagPostLevel(eDiag_Error); // To see all output, uncomment next line: //SetDiagPostLevel(eDiag_Trace); DisableArgDescriptions(fDisableStdArgs); // Create command-line arguments unique_ptr<CCommandArgDescriptions> cmd(new CCommandArgDescriptions(true, 0, CCommandArgDescriptions::eCommandMandatory | CCommandArgDescriptions::eNoSortCommands)); cmd->SetUsageContext(GetArguments().GetProgramBasename(), "Test compression library (CArchive class)"); // test {{ unique_ptr<CArgDescriptions> arg(new CArgDescriptions(false)); arg->SetUsageContext(kEmptyStr, "Run standard internal test.", false, kUsageWidth); arg->AddDefaultPositional("fmt", "Compression format to test", CArgDescriptions::eString, "all"); arg->SetConstraint("fmt", &(*new CArgAllow_Strings, "all", "zip")); cmd->AddCommand("test", arg.release()); }} SetupArgDescriptions(cmd.release()); // Set base directory for file tests m_TestDir = CDir::GetCwd(); }
void CTest::Init(void) { SetDiagPostLevel(eDiag_Warning); unique_ptr<CArgDescriptions> d(new CArgDescriptions); d->SetUsageContext("test_dll", "DLL accessory class"); SetupArgDescriptions(d.release()); }
void COMSSAMerge::Init() { auto_ptr<CArgDescriptions> argDesc(new CArgDescriptions); argDesc->AddDefaultKey("i", "infiles", "file containing list of input files on separate lines", CArgDescriptions::eString, ""); argDesc->AddFlag("sw", "output search results without spectra"); argDesc->AddFlag("it", "input as text asn.1 formatted search results"); argDesc->AddFlag("ib", "input as binary asn.1 formatted search results"); argDesc->AddFlag("ix", "input as xml formatted search results"); argDesc->AddFlag("ibz2", "input as xml formatted search results compressed by bzip2"); argDesc->AddPositional("o", "output file name", CArgDescriptions::eString); argDesc->AddFlag("ot", "output as text asn.1 formatted search results"); argDesc->AddFlag("ob", "output as binary asn.1 formatted search results"); argDesc->AddFlag("ox", "output as xml formatted search results"); argDesc->AddFlag("obz2", "output as xml formatted search results compressed by bzip2"); argDesc->AddExtra(0,10000, "input file names", CArgDescriptions::eString); SetupArgDescriptions(argDesc.release()); // allow info posts to be seen SetDiagPostLevel(eDiag_Info); }
void CThreadedServerApp::Init(void) { CORE_SetLOG(LOG_cxx2c()); CORE_SetLOCK(MT_LOCK_cxx2c()); auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "sample server using thread pools"); arg_desc->AddKey("port", "N", "TCP port number on which to listen", CArgDescriptions::eInteger); arg_desc->SetConstraint("port", new CArgAllow_Integers(0, 0xFFFF)); arg_desc->AddDefaultKey("threads", "N", "Number of initial threads", CArgDescriptions::eInteger, "5"); arg_desc->AddDefaultKey("maxThreads", "N", "Maximum number of simultaneous threads", CArgDescriptions::eInteger, "10"); arg_desc->AddDefaultKey("queue", "N", "Maximum size of request queue", CArgDescriptions::eInteger, "20"); {{ CArgAllow* constraint = new CArgAllow_Integers(1, 999); arg_desc->SetConstraint("threads", constraint); arg_desc->SetConstraint("maxThreads", constraint); arg_desc->SetConstraint("queue", constraint); }} SetupArgDescriptions(arg_desc.release()); }
void CBDB_TestThreads::Init(void) { SetDiagTrace(eDT_Enable); SetDiagPostLevel(eDiag_Warning); SetDiagPostFlag(eDPF_File); SetDiagPostFlag(eDPF_Line); SetDiagPostFlag(eDPF_Trace); auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext("test_bdb_threads", "test BDB library with threads"); arg_desc->AddOptionalKey("recs", "recs", "Number of records to load per thread", CArgDescriptions::eInteger); arg_desc->AddOptionalKey("threads", "threads", "Number of concurrent threads", CArgDescriptions::eInteger); SetupArgDescriptions(arg_desc.release()); }
// -------------------------------------------------------------------------- void CAsn2FastaApp::Init(void) // -------------------------------------------------------------------------- { auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext( GetArguments().GetProgramBasename(), "Convert an ASN.1 Seq-entry into a FASTA report", false); // input {{ // name arg_desc->AddOptionalKey("i", "InputFile", "Input file name", CArgDescriptions::eInputFile); // input file serial format (AsnText\AsnBinary\XML, default: AsnText) arg_desc->AddOptionalKey("serial", "SerialFormat", "Input file format", CArgDescriptions::eString); arg_desc->SetConstraint("serial", &(*new CArgAllow_Strings, "text", "binary", "XML")); // id arg_desc->AddOptionalKey("id", "ID", "Specific ID to display", CArgDescriptions::eString); // input type: arg_desc->AddDefaultKey( "type", "AsnType", "ASN.1 object type", CArgDescriptions::eString, "any" ); arg_desc->SetConstraint( "type", &( *new CArgAllow_Strings, "any", "seq-entry", "bioseq", "bioseq-set" ) ); // filtering options: arg_desc->AddFlag("nucs-only", "Only emit nucleotide sequences"); arg_desc->AddFlag("prots-only", "Only emit protein sequences"); }} // batch processing {{ arg_desc->AddFlag("batch", "Process NCBI release file"); // compression arg_desc->AddFlag("c", "Compressed file"); // propogate top descriptors arg_desc->AddFlag("p", "Propogate top descriptors"); arg_desc->AddFlag("defline-only", "Only output the defline"); }} // output {{ arg_desc->AddFlag("show-mods", "Show FASTA header mods (e.g. [strain=abc])"); // name arg_desc->AddOptionalKey("o", "OutputFile", "Output file name", CArgDescriptions::eOutputFile); }} SetupArgDescriptions(arg_desc.release()); }
void CTestTransmission::Init(void) { SetDiagPostLevel(eDiag_Warning); unique_ptr<CArgDescriptions> d(new CArgDescriptions); d->SetUsageContext("test_transmissionrw", "test transmission reader/writer"); SetupArgDescriptions(d.release()); }
void CDBAPI_CacheTest::Init(void) { SetDiagPostLevel(eDiag_Warning); SetDiagPostFlag(eDPF_File); SetDiagPostFlag(eDPF_Line); auto_ptr<CArgDescriptions> d(new CArgDescriptions); d->SetUsageContext("test_bdb", "test BDB library"); SetupArgDescriptions(d.release()); }
void CTestTable::Init(void) { SetDiagPostLevel(eDiag_Warning); auto_ptr<CArgDescriptions> d(new CArgDescriptions); d->SetUsageContext("test_table", "test NCBI table"); SetupArgDescriptions(d.release()); }
void CBDBEnvKeeperApp::Init(void) { auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "BDB Environment Keeper"); SetupArgDescriptions(arg_desc.release()); }
void CTestIdMux::Init(void) { SetDiagPostLevel(eDiag_Warning); unique_ptr<CArgDescriptions> d(new CArgDescriptions); d->SetUsageContext("test_id_mux", "test id mux-demux"); SetupArgDescriptions(d.release()); }
void CBDB_PhoneBookDemo1::Init(void) { SetDiagPostLevel(eDiag_Warning); SetDiagPostFlag(eDPF_File); SetDiagPostFlag(eDPF_Line); auto_ptr<CArgDescriptions> d(new CArgDescriptions); d->SetUsageContext("bdb demo1", "Demo1 application for BDB library"); SetupArgDescriptions(d.release()); }
//------------------------------------------------------------------------- void CWinMaskApplication::Init(void) { HideStdArgs(fHideLogfile | fHideConffile | fHideVersion | fHideDryRun); auto_ptr< CArgDescriptions > arg_desc( new CArgDescriptions ); // Set the program description arg_desc->SetUsageContext( GetArguments().GetProgramBasename(), USAGE_LINE ); CWinMaskConfig::AddWinMaskArgs(*arg_desc); // Parse the arguments according to descriptions. SetupArgDescriptions(arg_desc.release()); }
void CTestRangeMap::Init(void) { SetDiagPostLevel(eDiag_Warning); auto_ptr<CArgDescriptions> d(new CArgDescriptions); d->SetUsageContext("testrangemap", "test different interval search classes"); d->AddDefaultKey("t", "type", "type of container to use", CArgDescriptions::eString, "CIntervalTree"); d->SetConstraint("t", (new CArgAllow_Strings)-> Allow("CIntervalTree")->Allow("i")-> Allow("CRangeMap")->Allow("r")); d->AddDefaultKey("c", "count", "how may times to run whole test", CArgDescriptions::eInteger, "1"); d->AddFlag("s", "silent operation - do not print log"); d->AddFlag("ps", "print total number of intervals"); d->AddFlag("psn", "print total number of scanned intervals"); d->AddDefaultKey("n", "rangeNumber", "number of intervals to use", CArgDescriptions::eInteger, "10000"); d->AddDefaultKey("l", "length", "length of whole region", CArgDescriptions::eInteger, "1000"); d->AddDefaultKey("il", "intervalLength", "max length of intervals to use", CArgDescriptions::eInteger, "20") ; d->AddDefaultKey("ss", "scanStep", "step of scan intervals", CArgDescriptions::eInteger, "10"); d->AddDefaultKey("sl", "scanLength", "length of scan intervals", CArgDescriptions::eInteger, "20"); d->AddDefaultKey("sc", "scanCount", "how may times to run scan test", CArgDescriptions::eInteger, "1"); SetupArgDescriptions(d.release()); }
void CBlastDemoApplication::Init(void) { // Create command-line argument descriptions class auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); // Specify USAGE context arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "BLAST demo program"); arg_desc->AddKey ("program", "ProgramName", "One of blastn, megablast, disc_megablast, blastp, blastx, tblastn, tblastx, rpsblast", CArgDescriptions::eString); arg_desc->SetConstraint ("program", &(*new CArgAllow_Strings, "blastn", "megablast", "disc_megablast", "blastp", "blastx", "tblastn", "tblastx", "rpsblast")); arg_desc->AddDefaultKey ("db", "DataBase", "This is the name of the database", CArgDescriptions::eString, "nr"); arg_desc->AddDefaultKey("in", "Queryfile", "A FASTA file with the query", CArgDescriptions::eInputFile, "stdin"); arg_desc->AddDefaultKey("parse", "parse", "Parse FASTA defline", CArgDescriptions::eBoolean, "f"); arg_desc->AddDefaultKey("out", "Outputfile", "The output file", CArgDescriptions::eOutputFile, "stdout"); arg_desc->AddDefaultKey("evalue", "evalue", "E-value threshold for saving hits", CArgDescriptions::eDouble, "0"); arg_desc->AddDefaultKey("penalty", "penalty", "Penalty score for a mismatch", CArgDescriptions::eInteger, "0"); arg_desc->AddDefaultKey("reward", "reward", "Reward score for a match", CArgDescriptions::eInteger, "0"); arg_desc->AddDefaultKey("matrix", "matrix", "Scoring matrix name", CArgDescriptions::eString, "BLOSUM62"); arg_desc->AddDefaultKey("hitsize", "hitsize", "Hitlist size", CArgDescriptions::eInteger, "100"); // Setup arg.descriptions for this application SetupArgDescriptions(arg_desc.release()); }
void CSeqDBPerfApp::Init() { HideStdArgs(fHideConffile | fHideFullVersion | fHideXmlHelp | fHideDryRun); auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); // Specify USAGE context arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "CSeqDB performance testing client"); arg_desc->SetCurrentGroup("BLAST database options"); arg_desc->AddDefaultKey("db", "dbname", "BLAST database name", CArgDescriptions::eString, "nr"); arg_desc->AddDefaultKey("dbtype", "molecule_type", "Molecule type stored in BLAST database", CArgDescriptions::eString, "guess"); arg_desc->SetConstraint("dbtype", &(*new CArgAllow_Strings, "nucl", "prot", "guess")); arg_desc->SetCurrentGroup("Retrieval options"); arg_desc->AddFlag("scan_uncompressed", "Do a full database scan of uncompressed sequence data", true); arg_desc->AddFlag("scan_compressed", "Do a full database scan of compressed sequence data", true); arg_desc->AddFlag("get_metadata", "Retrieve BLAST database metadata", true); arg_desc->SetDependency("scan_compressed", CArgDescriptions::eExcludes, "scan_uncompressed"); arg_desc->SetDependency("scan_compressed", CArgDescriptions::eExcludes, "get_metadata"); arg_desc->SetDependency("scan_uncompressed", CArgDescriptions::eExcludes, "get_metadata"); arg_desc->AddDefaultKey("num_threads", "number", "Number of threads to use (requires OpenMP)", CArgDescriptions::eInteger, "1"); arg_desc->SetConstraint("num_threads", new CArgAllow_Integers(0, kMax_Int)); //arg_desc->AddFlag("one_db_handle", "Build only 1 CSeqDB object?", true); //arg_desc->SetDependency("one_db_handle", CArgDescriptions::eRequires, "num_threads"); arg_desc->SetCurrentGroup("Output configuration options"); arg_desc->AddDefaultKey("out", "output_file", "Output file name", CArgDescriptions::eOutputFile, "-"); SetupArgDescriptions(arg_desc.release()); }
void CTest::Init(void) { SetDiagPostLevel(eDiag_Error); // To see all output, uncomment next line: //SetDiagPostLevel(eDiag_Trace); // Create command-line argument descriptions unique_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "Test compression library"); arg_desc->AddDefaultPositional ("lib", "Compression library to test", CArgDescriptions::eString, "all"); arg_desc->SetConstraint ("lib", &(*new CArgAllow_Strings, "all", "z", "bz2", "lzo")); SetupArgDescriptions(arg_desc.release()); }
void CTestApplication::Init(void) { auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "LDS test program"); arg_desc->AddOptionalKey("mklds", "mklds", "Index LDS directory", CArgDescriptions::eString); arg_desc->AddOptionalKey("ldsdir", "ldsdir", "Existing LDS directory to use", CArgDescriptions::eString); arg_desc->AddExtra(0, kMax_UInt, "IDs to check", CArgDescriptions::eString); SetupArgDescriptions(arg_desc.release()); }
void CTest::Init(void) { unique_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "Test program for the C Logging API"); // Setup arg.descriptions for this application SetupArgDescriptions(arg_desc.release()); // Reset environment variables that can affect test output putenv((char*)"SERVER_PORT="); putenv((char*)"HTTP_NCBI_SID="); putenv((char*)"HTTP_NCBI_PHID="); putenv((char*)"NCBI_LOG_SESSION_ID="); putenv((char*)"NCBI_LOG_HIT_ID="); putenv((char*)"NCBI_CONFIG__LOG__FILE="); }
void CImageTestApp::Init(void) { // Create command-line argument descriptions class auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); // Specify USAGE context arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "Image read/write test application"); arg_desc->AddDefaultKey("base", "ImageBase", "Base of image name", CArgDescriptions::eString, "test"); // Setup arg.descriptions for this application SetupArgDescriptions(arg_desc.release()); }
void Cn3DNoWin::Init(void) { // turn off some Mesa-related env vars, irrelevant to off-screen rendering and not platform-indepdendent setenv("MESA_NO_3DNOW", "true", 1); setenv("MESA_NO_SSE", "true", 1); // setup the diagnostic stream SetDiagHandler(DisplayDiagnostic, NULL, NULL); SetDiagPostLevel(eDiag_Info); // report all messages SetDiagTrace(eDT_Default); // trace messages only when DIAG_TRACE env. var. is set UnsetDiagTraceFlag(eDPF_Location); #ifdef _DEBUG SetDiagPostFlag(eDPF_File); SetDiagPostFlag(eDPF_Line); #else UnsetDiagTraceFlag(eDPF_File); UnsetDiagTraceFlag(eDPF_Line); #endif // C++ object verification CSerialObject::SetVerifyDataGlobal(eSerialVerifyData_Always); CObjectIStream::SetVerifyDataGlobal(eSerialVerifyData_Always); CObjectOStream::SetVerifyDataGlobal(eSerialVerifyData_Always); // set up argument processing CArgDescriptions *argDescr = new CArgDescriptions(false); argDescr->SetUsageContext(GetArguments().GetProgramName(), "No-Window Cn3D"); // get data from file or network argDescr->AddOptionalKey("f", "file", "Ncbi-mime-asn1, Biostruc, or Cdd ASN.1 data file", argDescr->eString); argDescr->AddOptionalKey("d", "id", "MMDB or PDB ID", argDescr->eString); // model, for network or Biostruc load argDescr->AddOptionalKey("o", "model", "Model type to use for coordinates", argDescr->eString); argDescr->SetConstraint("o", (new CArgAllow_Strings)->Allow("alpha")->Allow("single")->Allow("PDB")); // controls for output argDescr->AddKey("p", "pngfile", "Output PNG file name", argDescr->eString); argDescr->AddKey("w", "width", "Output width in pixels", argDescr->eInteger); argDescr->AddKey("h", "height", "Output height in pixels", argDescr->eInteger); argDescr->AddFlag("i", "Create interlaced PNG"); // use favorite style argDescr->AddOptionalKey("s", "style", "Favorite style", argDescr->eString); SetupArgDescriptions(argDescr); }
void CTestApp::Init(void) { SetDiagPostLevel(eDiag_Warning); SetDiagPostFlag(eDPF_All); auto_ptr<CArgDescriptions> d(new CArgDescriptions); d->SetUsageContext("test_strdbl", "test string <-> double conversion"); d->AddFlag("speed", "Run conversion speed benchmark"); d->AddOptionalKey("precision", "precision", "Run conversion precision benchmark", CArgDescriptions::eString); d->SetConstraint("precision", &(*new CArgAllow_Strings, "Posix", "PosixOld", "strtod")); d->AddDefaultKey("count", "count", "Number of test iterations to run", CArgDescriptions::eInteger, "1000000"); d->AddOptionalKey("test_strings", "test_strings", "List of test strings to run", CArgDescriptions::eString); d->AddDefaultKey("verbose", "verbose", "Verbose level", CArgDescriptions::eInteger, "0"); d->AddDefaultKey("threshold", "threshold", "Close match threshold", CArgDescriptions::eDouble, "0.01"); d->AddFlag("randomize", "Randomize test data (for precision and double-to-string tests)"); d->AddOptionalKey("seed", "Randomization", "Randomization seed value", CArgDescriptions::eInt8); d->AddDefaultKey("digits", "significantDigits", "The number of significant digits in double-to-string conversion", CArgDescriptions::eInteger, NStr::NumericToString(DBL_DIG)); d->SetConstraint("digits", new CArgAllow_Integers(1, DBL_DIG)); d->AddDefaultKey("mode", "testmode", "Test string-to-doube, or double-to-string", CArgDescriptions::eString, "both"); d->SetConstraint( "mode", &(*new CArgAllow_Strings, "str2dbl", "dbl2str", "both")); SetupArgDescriptions(d.release()); }
void CTestDateApp::Init(void) { auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "test of CDate_std::GetDate()"); arg_desc->AddKey("f", "format", "date format", CArgDescriptions::eString); arg_desc->AddKey("Y", "year", "year number", CArgDescriptions::eInteger); arg_desc->AddOptionalKey("M", "month", "month number", CArgDescriptions::eInteger); arg_desc->AddOptionalKey("D", "day", "day number", CArgDescriptions::eInteger); arg_desc->AddOptionalKey("S", "season", "season name", CArgDescriptions::eString); // hour, minute, second? SetupArgDescriptions(arg_desc.release()); }
void CServerTestApp::Init(void) { CORE_SetLOCK(MT_LOCK_cxx2c()); CORE_SetLOG(LOG_cxx2c()); auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "CServer test application"); arg_desc->AddDefaultKey("srvthreads", "N", "Initial number of server threads", CArgDescriptions::eInteger, "5"); arg_desc->AddDefaultKey("maxsrvthreads", "N", "Maximum number of server threads", CArgDescriptions::eInteger, "10"); arg_desc->AddDefaultKey("clthreads", "N", "Initial number of client threads", CArgDescriptions::eInteger, "5"); arg_desc->AddDefaultKey("maxclthreads", "N", "Maximum number of client threads", CArgDescriptions::eInteger, "10"); arg_desc->AddDefaultKey("requests", "N", "Number of requests to make", CArgDescriptions::eInteger, "100"); CArgAllow* constraint = new CArgAllow_Integers(1, 999); arg_desc->SetConstraint("srvthreads", constraint); arg_desc->SetConstraint("maxsrvthreads", constraint); arg_desc->SetConstraint("clthreads", constraint); arg_desc->SetConstraint("maxclthreads", constraint); arg_desc->SetConstraint("requests", constraint); arg_desc->AddDefaultKey("maxdelay", "N", "Maximum delay in milliseconds", CArgDescriptions::eInteger, "1000"); SetupArgDescriptions(arg_desc.release()); }
void CBamGraphTestApp::Init(void) { // Create command-line argument descriptions class auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions); // Specify USAGE context arg_desc->SetUsageContext(GetArguments().GetProgramBasename(), "CArgDescriptions demo program"); arg_desc->AddOptionalKey("dir", "Dir", "BAM files files directory", CArgDescriptions::eString); arg_desc->AddDefaultKey("file", "File", "BAM file name", CArgDescriptions::eString, BAM_FILE); arg_desc->AddOptionalKey("ref_label", "RefLabel", "RefSeq id in BAM file", CArgDescriptions::eString); arg_desc->AddOptionalKey("seq_id", "SeqId", "RefSeq Seq-id", CArgDescriptions::eString); arg_desc->AddFlag("log", "Generate logarithmic graph"); arg_desc->AddFlag("int", "Generate graph with int values"); arg_desc->AddOptionalKey("outlier_max", "OutlierMax", "Factor over average to treat as outlier", CArgDescriptions::eDouble); arg_desc->AddOptionalKey("bin_size", "BinSize", "Seq-graph bin size", CArgDescriptions::eInteger); arg_desc->AddOptionalKey("title", "Title", "Title of generated Seq-graph", CArgDescriptions::eString); arg_desc->AddDefaultKey("o", "OutputFile", "Output file of ASN.1", CArgDescriptions::eOutputFile, "-"); arg_desc->AddFlag("bin", "Write binary ASN.1"); // Setup arg.descriptions for this application SetupArgDescriptions(arg_desc.release()); }