/*
* Class: hdf_hdf5lib_H5
* Method: H5Ocopy
* Signature: (JLjava/lang/String;JLjava/lang/String;JJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Ocopy
(JNIEnv *env, jclass clss, jlong cur_loc_id, jstring cur_name,
jlong dst_loc_id, jstring dst_name, jlong create_id, jlong access_id)
{
const char *lCurName = NULL;
const char *lDstName = NULL;
herr_t status = FAIL;
UNUSED(clss);
if (NULL == cur_name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ocopy: src name is NULL");
if (NULL == dst_name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ocopy: dst name is NULL");
PIN_JAVA_STRING(ENVONLY, cur_name, lCurName, NULL, "H5Ocopy: src name not pinned");
PIN_JAVA_STRING(ENVONLY, dst_name, lDstName, NULL, "H5Ocopy: dest name not pinned");
if ((status = H5Ocopy((hid_t)cur_loc_id, lCurName, (hid_t)dst_loc_id, lDstName, (hid_t)create_id, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
if (lDstName)
UNPIN_JAVA_STRING(ENVONLY, dst_name, lDstName);
if (lCurName)
UNPIN_JAVA_STRING(ENVONLY, cur_name, lCurName);
} /* end Java_hdf_hdf5lib_H5_H5Ocopy */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Oset_comment_by_name
* Signature: (JLjava/lang/String;Ljava/lang/String;J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Oset_1comment_1by_1name
(JNIEnv *env, jclass clss, jlong loc_id,
jstring name, jstring comment, jlong access_id)
{
const char *objName = NULL;
const char *objComment = NULL;
jboolean isCopy;
herr_t status = FAIL;
UNUSED(clss);
if (NULL == name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Oset_comment_by_name: object name is NULL");
PIN_JAVA_STRING(ENVONLY, name, objName, NULL, "H5Oset_comment_by_name: object name not pinned");
if (NULL != comment)
PIN_JAVA_STRING(ENVONLY, comment, objComment, &isCopy, "H5Oset_comment_by_name: object comment not pinned");
if ((status = H5Oset_comment_by_name((hid_t)loc_id, objName, objComment, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
if (objComment)
UNPIN_JAVA_STRING(ENVONLY, comment, objComment);
if (objName)
UNPIN_JAVA_STRING(ENVONLY, name, objName);
} /* end Java_hdf_hdf5lib_H5_H5Oset_1comment_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_name_by_idx
* Signature: (JLjava/lang/String;IIJJ)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1name_1by_1idx
(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jint idx_type, jint order, jlong n, jlong lapl_id)
{
size_t buf_size;
char *aValue;
jlong status_size;
jstring str = NULL;
const char *aName;
PIN_JAVA_STRING(obj_name, aName);
if (aName != NULL) {
/* get the length of the attribute name */
status_size = H5Aget_name_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type,
(H5_iter_order_t) order, (hsize_t) n, (char*)NULL, (size_t)0, (hid_t)lapl_id);
if(status_size < 0) {
UNPIN_JAVA_STRING(obj_name, aName);
h5libraryError(env);
} /* end if */
else {
buf_size = (size_t)status_size + 1;/* add extra space for the null terminator */
aValue = (char*)HDmalloc(sizeof(char) * buf_size);
if (aValue == NULL) {
UNPIN_JAVA_STRING(obj_name, aName);
h5outOfMemory(env, "H5Aget_name_by_idx: malloc failed ");
} /* end if */
else {
status_size = H5Aget_name_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type,
(H5_iter_order_t) order, (hsize_t) n, (char*)aValue, (size_t)buf_size, (hid_t)lapl_id);
UNPIN_JAVA_STRING(obj_name, aName);
if (status_size < 0) {
HDfree(aValue);
h5libraryError(env);
} /* end if */
else {
str = ENVPTR->NewStringUTF(ENVPAR aValue);
HDfree(aValue);
if (str == NULL) {
/* exception -- fatal JNI error */
h5JNIFatalError(env, "H5Aget_name_by_idx: return string not created");
} /* end if */
} /* end else */
} /* end else */
} /* end else */
}
return str;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1name_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_info_by_idx
* Signature: (JLjava/lang/String;IIJJ)Lhdf/hdf5lib/structs/H5A_info_t;
*/
JNIEXPORT jobject JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1info_1by_1idx
(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jint idx_type, jint order, jlong n, jlong lapl_id)
{
herr_t status;
H5A_info_t ainfo;
jvalue args[4];
jobject ret_obj = NULL;
const char *aName;
PIN_JAVA_STRING(obj_name, aName);
if (aName != NULL) {
status = H5Aget_info_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type,
(H5_iter_order_t)order, (hsize_t)n, &ainfo, (hid_t)lapl_id);
UNPIN_JAVA_STRING(obj_name, aName);
if (status < 0) {
h5libraryError(env);
} /* end if */
else {
args[0].z = ainfo.corder_valid;
args[1].j = ainfo.corder;
args[2].i = ainfo.cset;
args[3].j = (jlong)ainfo.data_size;
CALL_CONSTRUCTOR("hdf/hdf5lib/structs/H5A_info_t", "(ZJIJ)V", args);
} /* end else */
}
return ret_obj;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1info_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Oexists_by_name
* Signature: (JLjava/lang/String;J)Z
*/
JNIEXPORT jboolean JNICALL
Java_hdf_hdf5lib_H5_H5Oexists_1by_1name
(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jlong access_id)
{
const char *objName = NULL;
htri_t bval = JNI_FALSE;
UNUSED(clss);
if (NULL == name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Oexists_by_name: object name is NULL");
PIN_JAVA_STRING(ENVONLY, name, objName, NULL, "H5Oexists_by_name: object name not pinned");
if ((bval = H5Oexists_by_name((hid_t)loc_id, objName, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
bval = (bval > 0) ? JNI_TRUE : JNI_FALSE;
done:
if (objName)
UNPIN_JAVA_STRING(ENVONLY, name, objName);
return (jboolean)bval;
} /* end Java_hdf_hdf5lib_H5_H5Oexists_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Lget_info_by_idx
* Signature: (JLjava/lang/String;IIJJ)Lhdf/hdf5lib/structs/H5L_info_t;
*/
JNIEXPORT jobject JNICALL
Java_hdf_hdf5lib_H5_H5Lget_1info_1by_1idx
(JNIEnv *env, jclass clss, jlong loc_id, jstring name,
jint index_field, jint order, jlong link_n, jlong access_id)
{
jobject ret_obj = NULL;
jvalue args[5];
herr_t status;
H5L_info_t infobuf;
const char *lName;
PIN_JAVA_STRING(name, lName);
if (lName != NULL) {
status = H5Lget_info_by_idx((hid_t)loc_id, lName, (H5_index_t)index_field, (H5_iter_order_t)order, (hsize_t)link_n, &infobuf, (hid_t)access_id);
UNPIN_JAVA_STRING(name, lName);
if (status < 0) {
h5libraryError(env);
} /* end if */
else {
args[0].i = infobuf.type;
args[1].z = infobuf.corder_valid;
args[2].j = infobuf.corder;
args[3].i = infobuf.cset;
if(infobuf.type==0)
args[4].j = (jlong)infobuf.u.address;
else
args[4].j = (jlong)infobuf.u.val_size;
CALL_CONSTRUCTOR("hdf/hdf5lib/structs/H5L_info_t", "(IZJIJ)V", args);
} /* end els */
}
return ret_obj;
} /* end Java_hdf_hdf5lib_H5_H5Lget_1info_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ovisit_by_name
* Signature: (JLjava/lang/String;IILjava/lang/Object;Ljava/lang/Object;IJ)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Ovisit_1by_1name
(JNIEnv *env, jclass clss, jlong grp_id, jstring name, jint idx_type, jint order,
jobject callback_op, jobject op_data, jint fields, jlong access_id)
{
cb_wrapper wrapper = { callback_op, op_data };
const char *objName = NULL;
herr_t status = FAIL;
UNUSED(clss);
ENVPTR->GetJavaVM(ENVONLY, &jvm);
CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
if (NULL == op_data)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ovisit_by_name: op_data is NULL");
if (NULL == callback_op)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ovisit_by_name: callback_op is NULL");
if (NULL == name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ovisit_by_name: object name is NULL");
PIN_JAVA_STRING(ENVONLY, name, objName, NULL, "H5Ovisit_by_name: object name not pinned");
if ((status = H5Ovisit_by_name2((hid_t)grp_id, objName, (H5_index_t)idx_type, (H5_iter_order_t)order, (H5O_iterate_t)H5O_iterate_cb, (void *)&wrapper, (unsigned)fields, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
if (objName)
UNPIN_JAVA_STRING(ENVONLY, name, objName);
return status;
} /* end Java_hdf_hdf5lib_H5_H5Ovisit_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ovisit_by_name
* Signature: (JLjava/lang/String;IILjava/lang/Object;Ljava/lang/Object;J)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Ovisit_1by_1name
(JNIEnv *env, jclass clss, jlong grp_id, jstring name, jint idx_type, jint order,
jobject callback_op, jobject op_data, jlong access_id)
{
herr_t status = -1;
const char *lName;
ENVPTR->GetJavaVM(ENVPAR &jvm);
visit_callback = callback_op;
if (op_data == NULL) {
h5nullArgument(env, "H5Ovisit_by_name: op_data is NULL");
return -1;
} /* end if */
else if (callback_op == NULL) {
h5nullArgument(env, "H5Ovisit_by_name: callback_op is NULL");
return -1;
} /* end if */
else {
PIN_JAVA_STRING(name, lName);
if (lName != NULL) {
status = H5Ovisit_by_name((hid_t)grp_id, lName, (H5_index_t)idx_type, (H5_iter_order_t)order, (H5O_iterate_t)H5O_iterate_cb, (void*)op_data, (hid_t)access_id);
UNPIN_JAVA_STRING(name, lName);
if (status < 0)
h5libraryError(env);
}
}
return status;
} /* end Java_hdf_hdf5lib_H5_H5Ovisit_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ecreate_msg
* Signature: (JILjava/lang/String;)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Ecreate_1msg
(JNIEnv *env, jclass cls, jlong err_id, jint msg_type, jstring err_msg)
{
hid_t ret_val = -1;
const char *the_err_msg;
H5E_type_t error_msg_type = (H5E_type_t)msg_type;
if (err_id < 0) {
h5badArgument(env, "H5Ecreate_msg: invalid argument");
} /* end if */
else {
PIN_JAVA_STRING(err_msg, the_err_msg);
if (the_err_msg != NULL) {
ret_val = H5Ecreate_msg((hid_t)err_id, error_msg_type, the_err_msg);
UNPIN_JAVA_STRING(err_msg, the_err_msg);
if (ret_val < 0)
h5libraryError(env);
}
} /* end else */
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Ecreate_1msg */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Oset_comment_by_name
* Signature: (JLjava/lang/String;Ljava/lang/String;J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Oset_1comment_1by_1name
(JNIEnv *env, jclass clss, jlong loc_id,
jstring name, jstring comment, jlong access_id)
{
herr_t status = -1;
const char *oName;
const char *oComment;
PIN_JAVA_STRING(name, oName);
if (oName != NULL) {
if (comment == NULL) {
status = H5Oset_comment_by_name((hid_t)loc_id, oName, NULL, (hid_t)access_id);
} /* end if */
else {
jboolean isCopy;
oComment = ENVPTR->GetStringUTFChars(ENVPAR comment, &isCopy);
if (oComment != NULL) {
status = H5Oset_comment_by_name((hid_t)loc_id, oName, oComment, (hid_t)access_id);
ENVPTR->ReleaseStringUTFChars(ENVPAR comment, oComment);
} /* end if */
} /* end else */
UNPIN_JAVA_STRING(name, oName);
if (status < 0)
h5libraryError(env);
}
} /* end Java_hdf_hdf5lib_H5_H5Oset_1comment_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Gget_info_by_idx
* Signature: (JLjava/lang/String;IIJJ)Lhdf/hdf5lib/structs/H5G_info_t;
*/
JNIEXPORT jobject JNICALL
Java_hdf_hdf5lib_H5_H5Gget_1info_1by_1idx
(JNIEnv *env, jclass cls, jlong loc_id, jstring name, jint index_type,
jint order, jlong n, jlong lapl_id)
{
herr_t ret_val = -1;
const char *gName;
H5G_info_t group_info;
H5_index_t cindex_type = (H5_index_t)index_type;
H5_iter_order_t corder = (H5_iter_order_t)order;
PIN_JAVA_STRING(name, gName, NULL);
ret_val = H5Gget_info_by_idx((hid_t)loc_id, gName, cindex_type,
corder, (hsize_t)n, &group_info, (hid_t)lapl_id);
UNPIN_JAVA_STRING(name, gName);
if (ret_val < 0) {
h5libraryError(env);
return NULL;
} /* end if */
return create_H5G_info_t(env, group_info);
} /* end Java_hdf_hdf5lib_H5_H5Gget_1info_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Literate_by_name
* Signature: (JLjava/lang/String;IIJLjava/lang/Object;Ljava/lang/Object;J)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Literate_1by_1name
(JNIEnv *env, jclass clss, jlong grp_id, jstring name, jint idx_type, jint order,
jlong idx, jobject callback_op, jobject op_data, jlong access_id)
{
hsize_t start_idx = (hsize_t)idx;
herr_t status = -1;
const char *lName;
ENVPTR->GetJavaVM(ENVPAR &jvm);
cb_wrapper wrapper = {callback_op, op_data};
if ((op_data == NULL) || (callback_op == NULL)) {
h5nullArgument(env, "H5Literate_by_name: op_data or callback_op is NULL");
} /* end if */
else {
PIN_JAVA_STRING(name, lName);
if (lName != NULL) {
status = H5Literate_by_name((hid_t)grp_id, lName, (H5_index_t)idx_type, (H5_iter_order_t)order, (hsize_t*)&start_idx, (H5L_iterate_t)H5L_iterate_cb, (void*)&wrapper, (hid_t)access_id);
UNPIN_JAVA_STRING(name, lName);
if (status < 0)
h5libraryError(env);
}
} /* end else */
return status;
} /* end Java_hdf_hdf5lib_H5_H5Literate_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Gopen2
* Signature: (JLjava/lang/String;J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Gopen2(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jlong access_plist_id)
{
hid_t group_id = -1;
const char *gName;
PIN_JAVA_STRING(name, gName, -1);
group_id = H5Gopen2((hid_t)loc_id, gName, (hid_t)access_plist_id );
UNPIN_JAVA_STRING(name, gName);
if (group_id < 0)
h5libraryError(env);
return (jlong)group_id;
} /* end Java_hdf_hdf5lib_H5__1H5Gopen2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Adelete_by_idx
* Signature: (JLjava/lang/String;IIJJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Adelete_1by_1idx
(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jint idx_type, jint order, jlong n, jlong lapl_id)
{
herr_t status = -1;
const char *aName;
PIN_JAVA_STRING(obj_name, aName);
if (aName != NULL) {
status = H5Adelete_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type, (H5_iter_order_t)order, (hsize_t)n, (hid_t)lapl_id);
UNPIN_JAVA_STRING(obj_name, aName);
if (status < 0)
h5libraryError(env);
}
} /* end Java_hdf_hdf5lib_H5_H5Adelete_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5PLprepend
* Signature: (Ljava/lang/String;)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5PLprepend
(JNIEnv *env, jclass clss, jobjectArray plugin_path)
{
const char *aName;
herr_t retVal = -1;
PIN_JAVA_STRING(plugin_path, aName);
if (aName != NULL) {
retVal = H5PLprepend(aName);
UNPIN_JAVA_STRING(plugin_path, aName);
if (retVal < 0)
h5libraryError(env);
}
} /* end Java_hdf_hdf5lib_H5_H5PLprepend */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ldelete
* Signature: (JLjava/lang/String;J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Ldelete
(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jlong access_id)
{
herr_t status = -1;
const char *lName;
PIN_JAVA_STRING(name, lName);
if (lName != NULL) {
status = H5Ldelete((hid_t)loc_id, lName, (hid_t)access_id);
UNPIN_JAVA_STRING(name, lName);
if (status < 0)
h5libraryError(env);
}
} /* end Java_hdf_hdf5lib_H5_H5Ldelete */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Lget_name_by_idx
* Signature: (JLjava/lang/String;IIJJ)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Lget_1name_1by_1idx
(JNIEnv *env, jclass clss, jlong loc_id, jstring name,
jint index_field, jint order, jlong link_n, jlong access_id)
{
jlong status_size;
jstring str = NULL;
size_t buf_size;
const char *lName;
char *lValue;
PIN_JAVA_STRING(name, lName);
if (lName != NULL) {
/* get the length of the link name */
status_size = H5Lget_name_by_idx((hid_t)loc_id, lName, (H5_index_t)index_field, (H5_iter_order_t)order, (hsize_t)link_n, (char*)NULL, (size_t)0, H5P_DEFAULT);
if(status_size < 0) {
h5libraryError(env);
} /* end if */
else {
buf_size = (size_t)status_size + 1;/* add extra space for the null terminator */
lValue = (char*)HDmalloc(sizeof(char) * buf_size);
if (lValue == NULL) {
h5outOfMemory(env, "H5Lget_name_by_idx: malloc failed ");
} /* end if */
else {
status_size = H5Lget_name_by_idx((hid_t)loc_id, lName, (H5_index_t)index_field, (H5_iter_order_t)order, (hsize_t)link_n, (char*)lValue, (size_t)buf_size, (hid_t)access_id);
if (status_size < 0) {
HDfree(lValue);
h5libraryError(env);
} /* end if */
else {
str = ENVPTR->NewStringUTF(ENVPAR lValue);
HDfree(lValue);
if (str == NULL)
h5JNIFatalError(env, "H5Lget_name_by_idx: return string not created");
} /* end else */
} /* end else */
} /* end else */
UNPIN_JAVA_STRING(name, lName);
}
return str;
} /* end Java_hdf_hdf5lib_H5_H5Lget_1name_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Olink
* Signature: (JJLjava/lang/String;JJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Olink
(JNIEnv *env, jclass clss, jlong cur_loc_id, jlong dst_loc_id,
jstring dst_name, jlong create_id, jlong access_id)
{
herr_t status = -1;
const char *lDstName;
PIN_JAVA_STRING(dst_name, lDstName);
if (lDstName != NULL) {
status = H5Olink((hid_t)cur_loc_id, (hid_t)dst_loc_id, lDstName, (hid_t)create_id, (hid_t)access_id);
UNPIN_JAVA_STRING(dst_name, lDstName);
if (status < 0)
h5libraryError(env);
}
} /* end Java_hdf_hdf5lib_H5_H5Olink */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Oget_comment_by_name
* Signature: (JLjava/lang/String;J)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Oget_1comment_1by_1name
(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jlong access_id)
{
char *oComment;
const char *oName;
ssize_t buf_size;
ssize_t status;
jstring str = NULL;
PIN_JAVA_STRING(name, oName);
if (oName != NULL) {
/* get the length of the comment */
buf_size = H5Oget_comment_by_name((hid_t)loc_id, oName, NULL, 0, (hid_t)access_id);
if (buf_size < 0) {
h5badArgument( env, "H5Oget_comment_by_name: buf_size < 0");
} /* end if */
else if (buf_size > 0) {
buf_size++; /* add extra space for the null terminator */
oComment = (char *)HDmalloc(sizeof(char) * (size_t)buf_size);
if (oComment == NULL) {
h5outOfMemory( env, "H5Oget_comment_by_name: malloc failed");
} /* end if */
else {
status = H5Oget_comment_by_name((hid_t)loc_id, oName, oComment, (size_t)buf_size, (hid_t)access_id);
if (status < 0) {
h5libraryError(env);
} /* end if */
else {
/* may throw OutOfMemoryError */
str = ENVPTR->NewStringUTF(ENVPAR oComment);
if (str == NULL) {
h5JNIFatalError( env, "H5Oget_comment_by_name: return string not allocated");
} /* end if */
} /* end else */
HDfree(oComment);
}
} /* end if */
UNPIN_JAVA_STRING(name, oName);
}
return (jstring)str;
} /* end Java_hdf_hdf5lib_H5_H5Oget_1comment_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Adelete
* Signature: (JLjava/lang/String;)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Adelete
(JNIEnv *env, jclass clss, jlong loc_id, jstring name)
{
herr_t status = -1;
const char *aName;
PIN_JAVA_STRING(name, aName);
if (aName != NULL) {
status = H5Adelete((hid_t)loc_id, aName);
UNPIN_JAVA_STRING(name, aName);
if (status < 0)
h5libraryError(env);
}
return (jint)status;
} /* end Java_hdf_hdf5lib_H5_H5Adelete */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ldelete_by_idx
* Signature: (JLjava/lang/String;IIJJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Ldelete_1by_1idx
(JNIEnv *env, jclass clss, jlong loc_id, jstring name,
jint index_field, jint order, jlong link_n, jlong access_id)
{
hsize_t n = (hsize_t)link_n;
herr_t status;
const char *lName;
PIN_JAVA_STRING(name, lName);
if (lName != NULL) {
status = H5Ldelete_by_idx((hid_t)loc_id, lName, (H5_index_t)index_field, (H5_iter_order_t)order, n, (hid_t)access_id);
UNPIN_JAVA_STRING(name, lName);
if (status < 0)
h5libraryError(env);
}
} /* end Java_hdf_hdf5lib_H5_H5Ldelete_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aopen_name
* Signature: (JLjava/lang/String;)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aopen_1name
(JNIEnv *env, jclass clss, jlong loc_id, jstring name)
{
hid_t attr_id = -1;
const char *aName;
PIN_JAVA_STRING(name, aName);
if (aName != NULL) {
attr_id = H5Aopen_name((hid_t)loc_id, aName);
UNPIN_JAVA_STRING(name,aName);
if (attr_id < 0)
h5libraryError(env);
}
return (jlong)attr_id;
} /* end Java_hdf_hdf5lib_H5__1H5Aopen_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Oopen
* Signature: (JLjava/lang/String;J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Oopen
(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jlong access_plist_id)
{
hid_t status = -1;
const char *oName;
PIN_JAVA_STRING(name, oName);
if (oName != NULL) {
status = H5Oopen((hid_t)loc_id, oName, (hid_t)access_plist_id );
UNPIN_JAVA_STRING(name, oName);
if (status < 0)
h5libraryError(env);
}
return (jlong)status;
} /* end Java_hdf_hdf5lib_H5__1H5Oopen */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Oset_comment
* Signature: (JLjava/lang/String;)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Oset_1comment
(JNIEnv *env, jclass clss, jlong loc_id, jstring comment)
{
const char *oComment = NULL;
herr_t status = FAIL;
UNUSED(clss);
if (NULL != comment)
PIN_JAVA_STRING(ENVONLY, comment, oComment, NULL, "H5Oset_comment: object comment not pinned");
if ((status = H5Oset_comment((hid_t)loc_id, oComment)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
if (oComment)
UNPIN_JAVA_STRING(ENVONLY, comment, oComment);
} /* end Java_hdf_hdf5lib_H5_H5Oset_1comment */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Rcreate
* Signature: ([BJLjava/lang/String;IJ)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Rcreate(JNIEnv *env, jclass clss, jbyteArray ref, jlong loc_id, jstring name, jint ref_type, jlong space_id)
{
const char *rName;
herr_t status = -1;
jbyte *refP;
jboolean isCopy2;
PIN_JAVA_STRING(name, rName, -1);
if (ref == NULL) {
UNPIN_JAVA_STRING(name, rName);
h5nullArgument( env, "H5Rcreate: ref is NULL");
} /* end if */
else {
if ((ref_type == H5R_OBJECT) && ENVPTR->GetArrayLength(ENVPAR ref) != H5R_OBJ_REF_BUF_SIZE) {
UNPIN_JAVA_STRING(name, rName);
h5badArgument( env, "H5Rcreate: ref input array != H5R_OBJ_REF_BUF_SIZE");
} /* end if */
else if ((ref_type == H5R_DATASET_REGION) && ENVPTR->GetArrayLength(ENVPAR ref) != H5R_DSET_REG_REF_BUF_SIZE) {
UNPIN_JAVA_STRING(name, rName);
h5badArgument( env, "H5Rcreate: region ref input array != H5R_DSET_REG_REF_BUF_SIZE");
} /* end else if */
else if ((ref_type != H5R_OBJECT) && (ref_type != H5R_DATASET_REGION)) {
UNPIN_JAVA_STRING(name, rName);
h5badArgument( env, "H5Rcreate: ref_type unknown type ");
} /* end else if */
else {
refP = (jbyte*)ENVPTR->GetByteArrayElements(ENVPAR ref, &isCopy2);
if (refP == NULL) {
UNPIN_JAVA_STRING(name, rName);
h5JNIFatalError(env, "H5Rcreate: ref not pinned");
} /* end if */
else {
status = H5Rcreate(refP, (hid_t)loc_id, rName, (H5R_type_t)ref_type, (hid_t)space_id);
UNPIN_JAVA_STRING(name, rName);
if (status < 0) {
ENVPTR->ReleaseByteArrayElements(ENVPAR ref, refP, JNI_ABORT);
h5libraryError(env);
} /* end if */
else {
ENVPTR->ReleaseByteArrayElements(ENVPAR ref, refP, 0);
} /* end else */
} /* end else */
} /* end else */
} /* end else */
return (jint)status;
} /* end Java_hdf_hdf5lib_H5_H5Rcreate */
JNIEXPORT jint JNICALL
Java_hdf_hdflib_HDFLibrary_Vfindattr
(JNIEnv *env, jclass clss, jlong id, jstring name)
{
int32 retVal = -1;
const char *cname;
PIN_JAVA_STRING(name, cname);
if (cname != NULL) {
retVal = Vfindattr((int32)id, cname);
UNPIN_JAVA_STRING(name, cname);
if (retVal == FAIL)
CALL_ERROR_CHECK();
}
return retVal;
}
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Aopen
* Signature: (JLjava/lang/String;J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aopen
(JNIEnv *env, jclass clss, jlong obj_id, jstring name, jlong access_plist)
{
hid_t retVal = -1;
const char *aName;
PIN_JAVA_STRING(name, aName);
if (aName != NULL) {
retVal = H5Aopen((hid_t)obj_id, aName, (hid_t)access_plist);
UNPIN_JAVA_STRING(name, aName);
if (retVal < 0)
h5libraryError(env);
}
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Aopen */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Acreate
* Signature: (JLjava/lang/String;JJJ)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Acreate
(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jlong type_id,
jlong space_id, jlong create_plist)
{
hid_t attr_id = -1;
const char *aName;
PIN_JAVA_STRING(name, aName);
if (aName != NULL) {
attr_id = H5Acreate2((hid_t)loc_id, aName, (hid_t)type_id, (hid_t)space_id, (hid_t)create_plist, (hid_t)H5P_DEFAULT);
UNPIN_JAVA_STRING(name, aName);
if (attr_id < 0)
h5libraryError(env);
}
return (jlong)attr_id;
} /* end Java_hdf_hdf5lib_H5__1H5Acreate */
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Oopen_by_idx
* Signature: (JLjava/lang/String;IIJJ)J;
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Oopen_1by_1idx
(JNIEnv *env, jclass clss, jlong loc_id, jstring name,
jint index_field, jint order, jlong link_n, jlong lapl_id)
{
hid_t retVal = -1;
const char *oName;
PIN_JAVA_STRING(name, oName);
if (oName != NULL) {
retVal = H5Oopen_by_idx((hid_t)loc_id, oName, (H5_index_t)index_field, (H5_iter_order_t)order, (hsize_t)link_n, (hid_t)lapl_id );
UNPIN_JAVA_STRING(name, oName);
if (retVal < 0)
h5libraryError(env);
}
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Oopen_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Gget_info_by_name
* Signature: (JLjava/lang/String;J)Lhdf/hdf5lib/structs/H5G_info_t;
*/
JNIEXPORT jobject JNICALL
Java_hdf_hdf5lib_H5_H5Gget_1info_1by_1name(JNIEnv *env, jclass cls, jlong loc_id, jstring name, jlong lapl_id)
{
herr_t ret_val = -1;
const char *gName;
H5G_info_t group_info;
PIN_JAVA_STRING(name, gName, NULL);
ret_val = H5Gget_info_by_name((hid_t)loc_id, gName, &group_info, (hid_t)lapl_id);
UNPIN_JAVA_STRING(name, gName);
if (ret_val < 0) {
h5libraryError(env);
return NULL;
} /* end if */
return create_H5G_info_t(env, group_info);
} /* end Java_hdf_hdf5lib_H5_H5Gget_1info_1by_1name */