コード例 #1
0
 double operator()(double nu)const{
   nu_[which_] = nu;
   double ans = pri_->logp(nu);
   if(!std::isfinite(ans)) return ans;
   ans += dirichlet_loglike(nu_, 0, 0, sumlog_, nobs_);
   return ans;
 }
コード例 #2
0
ファイル: ProductDirichletModel.cpp プロジェクト: cran/Boom
  double PDM::loglike(const Vector &Nu_columns) const {
    Matrix Nu(dim(), dim(), Nu_columns.data());
    const Matrix &sumlog(suf()->sumlog());
    double n = suf()->n();

    double ans = 0;
    for (uint i = 0; i < nrow(Nu); ++i)
      ans += dirichlet_loglike(Nu.row(i), 0, 0, sumlog.row(i), n);
    return ans;
  }
コード例 #3
0
  //======================================================================
  double DirichletModel::Loglike(const Vector &nu, Vector &g, Matrix &h,
                                 uint nd) const {
    /* returns log likelihood for the parameters of a Dirichlet
       distribution with sufficient statistic sumlogpi(lo..hi).  If
       pi(1)(lo..hi)..pi(nobs)(lo..hi) are probability vectors, then
       sumlogpi(j) = sum_i log(pi(i,j))

       if(nd>0) then the g(lo..hi) is filled with the gradient (with
       respect to nu).  If nd>1 then hess(lo..hi)(lo..hi) is filled
       with the hessian (wrt nu).  Otherwise the algorithm can be called
       with either g or hess = 0.

    */

    const Vector &sumlogpi(suf()->sumlog());
    double nobs = suf()->n();
    Vector *G(nd > 0 ? &g : nullptr);
    Matrix *H(nd > 1 ? &h : nullptr);
    return dirichlet_loglike(nu, G, H, sumlogpi, nobs);
  }
コード例 #4
0
ファイル: ProductDirichletModel.cpp プロジェクト: cran/Boom
  double PDM::dloglike(const Vector &Nu_columns, Vector &g) const {
    Matrix Nu(dim(), dim(), Nu_columns.data());
    const Matrix &sumlog(suf()->sumlog());
    double n = suf()->n();

    uint nr = nrow(Nu);
    Matrix G(nr, nr);
    Vector g_row(nr);

    double ans = 0;
    for (uint i = 0; i < nrow(Nu); ++i) {
      ans += dirichlet_loglike(Nu.row(i), &g_row, 0, sumlog.row(i), n);
      G.row(i) = g_row;
    }
    G = G.transpose();
    g.assign(G.begin(), G.end());

    // need to check that g is vectorized in the right way..  virtual
    // functions might expect columns instead of rows.
    return ans;
  }