コード例 #1
0
ファイル: base.c プロジェクト: ctuning/reproduce-adapt16
int main(){
  long ct_repeat=0;
  long ct_repeat_max=1;
  int ct_return=0;

    int  i, n = 64, flag, chkerr;

#ifdef XOPENME
  xopenme_init(1,2);
#endif

  if (getenv("CT_REPEAT_MAIN")!=NULL) ct_repeat_max=atol(getenv("CT_REPEAT_MAIN"));

    /* ar  */
    for(i = 0; i < n; i++)
      ar[i] = cos(2*M_PI*i/n);

#ifdef XOPENME
  xopenme_clock_start(0);
#endif

  for (ct_repeat=0; ct_repeat<ct_repeat_max; ct_repeat++)
  {
    /* forward fft */
    flag = 0;
    chkerr = fft1(n, flag);

    /* inverse fft */
    flag = 1;
    chkerr = fft1(n, flag);

  }

#ifdef XOPENME
  xopenme_clock_end(0);
  xopenme_dump_state();
  xopenme_finish();
#endif

    (void) chkerr; /* Silence compiler about unused 'chkerr'.  */

    return 0;
}
コード例 #2
0
ファイル: base.c プロジェクト: Paschalis/adapt16_benchmarks
int main(){
    int  i, n = 64, flag, chkerr;

    /* ar  */
    for(i = 0; i < n; i++)
      ar[i] = cos(2*M_PI*i/n);

    /* forward fft */
    flag = 0;
    chkerr = fft1(n, flag);

    /* inverse fft */
    flag = 1;
    chkerr = fft1(n, flag);

    (void) chkerr; /* Silence compiler about unused 'chkerr'.  */

    return 0;
}
コード例 #3
0
ファイル: mainwindow.cpp プロジェクト: coder80/SAnalysis
void MainWindow::on_pushButton_9_clicked()
{

   if (vec.size() == 0) return;
    vec_fft1.clear();
    vec_fft2.clear();
    vec_fft3.clear();
    vec_fft0.clear();
    vec_fft.clear();
    vec1.clear();
    wt.clear();
    double omega = ui->lineEdit->text().toDouble();
    double omega1 = omega - omega/vec.size();
    ui->lineEdit_2->setText(QString::number(omega1));
    fft1(vec, vec_fft1, vec_fft2);
    int N1 = vec.size() - 1;
    int M1 = vec.size();
    for (int i = 0; i < vec.size(); i++)
    {

        double x = double(i);
        vec_fft.push_back(x);
    }
    for (int i = 0; i < M1; i++)
    {
        double x;
        if (omega != 0)  x = i*omega1/M1;
        else x = double(i);
        wt.push_back(x);;
    }
    int N = vec_fft1.size();
    for (int i = 0; i < N; i++)
    {
        long double x = sqrt(vec_fft1[i]*vec_fft1[i] + vec_fft2[i]*vec_fft2[i])/N;
        vec_fft3.push_back(x);
    }
    if (gr != NULL) delete gr;
    gr = new Graph(this);
    gr->setVecX(wt);
    gr->setVecY(vec_fft3);
    gr->setData();
    gr->show();


}
コード例 #4
0
ファイル: gradient_volume.c プロジェクト: BIC-MNI/mni_autoreg
VIO_Status gradient3D_volume(FILE *ifd, 
                                VIO_Volume data, 
                                int xyzv[VIO_MAX_DIMENSIONS],
                                char *infile,
                                char *outfile, 
                                int ndim,
                                char *history,
                                int curvature_flg)

{ 
  float 
    *fdata,                        /* floating point storage for blurred volume */
    *f_ptr,                        /* pointer to fdata */
    tmp,
    max_val, 
    min_val,
    
    *dat_vector,                /* temp storage of original row, col or slice vect. */
    *dat_vecto2,                /* storage of result of dat_vector*kern                 */
    *kern;                        /* convolution kernel                               */
  int                                
    total_voxels,                
    vector_size_data,                /* original size of row, col or slice vector        */
    array_size_pow2,                /* actual size of vector/kernel data used in FFT    */
                                /* routines - needs to be a power of two            */
    array_size;

  int   
    data_offset;                /* offset required to place original data (size n)  */
                                /*  into array (size m=2^n) so that data is centered*/

  register int 
    slice_limit,
    row,col,slice,                /* counters to access original data                 */
    vindex;                        /* counter to access vector and vecto2              */

  int 
    slice_size,                        /* size of each data step - in bytes                */
    row_size, col_size;
                

  char
    full_outfilename[256];        /* name of output file */

  progress_struct 
    progress;                        /* used to monitor progress of calculations         */

  VIO_Status 
    status;
  
  int
    sizes[3],                        /* number of rows, cols and slices */
    pos[3];                          /* Input order of rows, cols, slices */

  VIO_Real
    steps[3];                        /* size of voxel step from center to center in x,y,z */

  /*---------------------------------------------------------------------------------*/
  /*             start by setting up the raw data.                                   */
  /*---------------------------------------------------------------------------------*/



  get_volume_sizes(data, sizes);          /* rows,cols,slices */
  get_volume_separations(data, steps);
  
  slice_size = sizes[xyzv[VIO_Y]] * sizes[xyzv[VIO_X]];    /* sizeof one slice  */
  col_size   = sizes[xyzv[VIO_Y]];               /* sizeof one column */
  row_size   = sizes[xyzv[VIO_X]];               /* sizeof one row    */
  
  total_voxels = sizes[xyzv[VIO_Y]]*sizes[xyzv[VIO_X]]*sizes[xyzv[VIO_Z]];
  
  ALLOC(fdata, total_voxels);
  f_ptr = fdata;

         /* read in data of input file. */

  set_file_position(ifd,(long)0);
  status = io_binary_data(ifd,READ_FILE, fdata, sizeof(float), total_voxels);
  if (status != OK)
    print_error_and_line_num("problems reading binary data...\n",__FILE__, __LINE__);


  /*--------------------------------------------------------------------------------------*/
  /*                get ready to start up the transformation.                             */
  /*--------------------------------------------------------------------------------------*/
  
  initialize_progress_report( &progress, FALSE, sizes[xyzv[VIO_Z]] + sizes[xyzv[VIO_Y]] + sizes[xyzv[VIO_X]] + 1,
                             "Gradient volume" );


  /* note data is stored by rows (along x), then by cols (along y) then slices (along z) */
  

  /*--------------------------------------------------------------------------------------*/
  /*                start with rows - i.e. the d/dx volume                                */
  /*--------------------------------------------------------------------------------------*/
  
  /*-----------------------------------------------------------------------------*/
  /*             determine   size of data structures needed                      */
  
  vector_size_data = sizes[xyzv[VIO_X]]; 
  
  /*             array_size_pow2 will hold the size of the arrays for FFT convolution,
                 remember that ffts require arrays 2^n in length                          */
  
  array_size_pow2  = next_power_of_two(vector_size_data);
  array_size = 2*array_size_pow2+1;  /* allocate 2*, since each point is a    */
                                     /* complex number for FFT, and the plus 1*/
                                     /* is for the zero offset FFT routine    */

  ALLOC(dat_vector, array_size);
  ALLOC(dat_vecto2, array_size);
  ALLOC(kern      , array_size);
  
  /*    1st calculate kern array for FT of 1st derivitive */
  
  make_kernel_FT(kern,array_size_pow2, ABS(steps[xyzv[VIO_X]]));

  if (curvature_flg)                /* 2nd derivative kernel */
    muli_vects(kern,kern,kern,array_size_pow2);

  /*    calculate offset for original data to be placed in vector            */
  
  data_offset = (array_size_pow2-sizes[xyzv[VIO_X]])/2;
  
  max_val = -FLT_MAX;
  min_val =  FLT_MAX;


  /*    2nd now convolve this kernel with the rows of the dataset            */  
  
  slice_limit = 0;
  switch (ndim) {
  case 1: slice_limit = 0; break;
  case 2: slice_limit = sizes[xyzv[VIO_Z]]; break;
  case 3: slice_limit = sizes[xyzv[VIO_Z]]; break;
  }


  for (slice = 0; slice < slice_limit; slice++) {      /* for each slice */
    
    for (row = 0; row < sizes[xyzv[VIO_Y]]; row++) {           /* for each row   */
      
      f_ptr = fdata + slice*slice_size + row*sizes[xyzv[VIO_X]];
      memset(dat_vector,0,(2*array_size_pow2+1)*sizeof(float));
      
      for (col=0; col< sizes[xyzv[VIO_X]]; col++) {        /* extract the row */
        dat_vector[1 +2*(col+data_offset)  ] = *f_ptr++;
      }
      
      fft1(dat_vector,array_size_pow2,1);
      muli_vects(dat_vecto2,dat_vector,kern,array_size_pow2);
      fft1(dat_vecto2,array_size_pow2,-1);
      
      f_ptr = fdata + slice*slice_size + row*sizes[xyzv[VIO_X]];
      for (col=0; col< sizes[xyzv[VIO_X]]; col++) {        /* put the row back */
        
        vindex = 1 + 2*(col+data_offset);
       *f_ptr = dat_vecto2[vindex]/array_size_pow2;


        if (max_val<*f_ptr) max_val = *f_ptr;
        if (min_val>*f_ptr) min_val = *f_ptr;


        f_ptr++;
      }
      
      
    }
    update_progress_report( &progress, slice+1 );
  }
  
  FREE(dat_vector);
  FREE(dat_vecto2);
  FREE(kern      );
    

  f_ptr = fdata;

  set_volume_real_range(data, min_val, max_val);
  
  
  printf("Making byte volume dx..." );
  for(slice=0; slice<sizes[xyzv[VIO_Z]]; slice++) {
    pos[xyzv[VIO_Z]] = slice;
    for(row=0; row<sizes[xyzv[VIO_Y]]; row++) {
      pos[xyzv[VIO_Y]] = row;
      for(col=0; col<sizes[xyzv[VIO_X]]; col++) {
        pos[xyzv[VIO_X]] = col;
        tmp = CONVERT_VALUE_TO_VOXEL(data, *f_ptr);
        SET_VOXEL_3D( data, pos[0], pos[1], pos[2], tmp);
        f_ptr++;
      }
    }
  }


  if (!curvature_flg)
    sprintf(full_outfilename,"%s_dx.mnc",outfile);
  else
    sprintf(full_outfilename,"%s_dxx.mnc",outfile);

  if (debug)
    print ("dx: min = %f, max = %f\n",min_val, max_val);

  status = output_modified_volume(full_outfilename, NC_UNSPECIFIED, FALSE, 
                                  min_val, max_val, data, infile, history, NULL);

  if (status != OK)
    print_error_and_line_num("problems writing dx gradient data...\n",__FILE__, __LINE__);


  
  /*--------------------------------------------------------------------------------------*/
  /*                 now do cols - i.e. the d/dy volume                                   */
  /*--------------------------------------------------------------------------------------*/
  
  /*-----------------------------------------------------------------------------*/
  /*             determine   size of data structures needed                      */
  

  set_file_position(ifd,0);
  status = io_binary_data(ifd,READ_FILE, fdata, sizeof(float), total_voxels);
  if (status != OK)
    print_error_and_line_num("problems reading binary data...\n",__FILE__, __LINE__);




  
  f_ptr = fdata;

  vector_size_data = sizes[xyzv[VIO_Y]];
  
  /*             array_size_pow2 will hold the size of the arrays for FFT convolution,
                 remember that ffts require arrays 2^n in length                          */
  
  array_size_pow2  = next_power_of_two(vector_size_data);
  array_size = 2*array_size_pow2+1;  /* allocate 2*, since each point is a    */
                                     /* complex number for FFT, and the plus 1*/
                                     /* is for the zero offset FFT routine    */
  
  ALLOC(dat_vector, array_size);
  ALLOC(dat_vecto2, array_size);
  ALLOC(kern      , array_size);
  
  /*    1st calculate kern array for FT of 1st derivitive */
  
  make_kernel_FT(kern,array_size_pow2, ABS(steps[xyzv[VIO_Y]]));
  
  if (curvature_flg)                /* 2nd derivative kernel */
    muli_vects(kern,kern,kern,array_size_pow2);

  /*    calculate offset for original data to be placed in vector            */
  
  data_offset = (array_size_pow2-sizes[xyzv[VIO_Y]])/2;
  
  /*    2nd now convolve this kernel with the rows of the dataset            */
  
  max_val = -FLT_MAX;
  min_val =  FLT_MAX;

  switch (ndim) {
  case 1: slice_limit = 0; break;
  case 2: slice_limit = sizes[xyzv[VIO_Z]]; break;
  case 3: slice_limit = sizes[xyzv[VIO_Z]]; break;
  }

  for (slice = 0; slice < slice_limit; slice++) {      /* for each slice */
    
    for (col = 0; col < sizes[xyzv[VIO_X]]; col++) {           /* for each col   */
      
      /*         f_ptr = fdata + slice*slice_size + row*sizeof(float); */
      
      f_ptr = fdata + slice*slice_size + col;
      
      
      memset(dat_vector,0,(2*array_size_pow2+1)*sizeof(float));
      
      for (row=0; row< sizes[xyzv[VIO_Y]]; row++) {        /* extract the col */
        dat_vector[1 +2*(row+data_offset) ] = *f_ptr;
        f_ptr += row_size;
      }
      
      
      fft1(dat_vector,array_size_pow2,1);
      muli_vects(dat_vecto2,dat_vector,kern,array_size_pow2);
      fft1(dat_vecto2,array_size_pow2,-1);
      
      f_ptr = fdata + slice*slice_size + col;
      for (row=0; row< sizes[xyzv[VIO_Y]]; row++) {        /* put the col back */
        
        vindex = 1 + 2*(row+data_offset);
        
        *f_ptr = dat_vecto2[vindex]/array_size_pow2;
        
        if (max_val<*f_ptr) max_val = *f_ptr;
        if (min_val>*f_ptr) min_val = *f_ptr;

        f_ptr += row_size;
        
        
      }
      
    }
    update_progress_report( &progress, slice+sizes[xyzv[VIO_Z]]+1 );
    
  }
  
  FREE(dat_vector);
  FREE(dat_vecto2);
  FREE(kern      );
  
  f_ptr = fdata;
  
  set_volume_real_range(data, min_val, max_val);


  printf("Making byte volume dy..." );
  for(slice=0; slice<sizes[xyzv[VIO_Z]]; slice++) {
    pos[xyzv[VIO_Z]] = slice;
    for(row=0; row<sizes[xyzv[VIO_Y]]; row++) {
      pos[xyzv[VIO_Y]] = row;
      for(col=0; col<sizes[xyzv[VIO_X]]; col++) {
        pos[xyzv[VIO_X]] = col;
        tmp = CONVERT_VALUE_TO_VOXEL(data, *f_ptr);
        SET_VOXEL_3D( data, pos[0], pos[1], pos[2], tmp);
        f_ptr++;
      }
    }
  }

  if (!curvature_flg)
    sprintf(full_outfilename,"%s_dy.mnc",outfile);
  else
    sprintf(full_outfilename,"%s_dyy.mnc",outfile);


  if (debug)
    print ("dy: min = %f, max = %f\n",min_val, max_val);

  status = output_modified_volume(full_outfilename, NC_UNSPECIFIED, FALSE, 
                                  min_val, max_val, data, infile, history, NULL);
  if (status != OK)
    print_error_and_line_num("problems writing dy gradient data...",__FILE__, __LINE__);
  
  
  /*--------------------------------------------------------------------------------------*/
  /*                 now do slices - i.e. the d/dz volume                                 */
  /*--------------------------------------------------------------------------------------*/
  
  /*-----------------------------------------------------------------------------*/
  /*             determine   size of data structures needed                      */


  set_file_position(ifd,0);
  status = io_binary_data(ifd,READ_FILE, fdata, sizeof(float), total_voxels);
  if (status != OK)
    print_error_and_line_num("problems reading binary data...\n",__FILE__, __LINE__);
  f_ptr = fdata;
  
  vector_size_data = sizes[xyzv[VIO_Z]];

  /*             array_size_pow2 will hold the size of the arrays for FFT convolution,
                 remember that ffts require arrays 2^n in length                          */
  
  array_size_pow2  = next_power_of_two(vector_size_data);
  array_size = 2*array_size_pow2+1;  /* allocate 2*, since each point is a    */
                                     /* complex number for FFT, and the plus 1*/
                                     /* is for the zero offset FFT routine    */
  
  ALLOC(dat_vector, array_size);
  ALLOC(dat_vecto2, array_size);
  ALLOC(kern      , array_size);

  if (ndim==1 || ndim==3) {
    
    /*    1st calculate kern array for FT of 1st derivitive */
    
    make_kernel_FT(kern,array_size_pow2, ABS(steps[xyzv[VIO_Z]]));

    if (curvature_flg)                /* 2nd derivative kernel */
      muli_vects(kern,kern,kern,array_size_pow2);
    
    /*    calculate offset for original data to be placed in vector            */
    
    data_offset = (array_size_pow2-sizes[xyzv[VIO_Z]])/2;
    
    /*    2nd now convolve this kernel with the slices of the dataset            */
    
    max_val = -FLT_MAX;
    min_val =  FLT_MAX;
    
    
    for (col = 0; col < sizes[xyzv[VIO_X]]; col++) {      /* for each column */
      
      for (row = 0; row < sizes[xyzv[VIO_Y]]; row++) {           /* for each row   */
        
        f_ptr = fdata + col*col_size + row;
        
        memset(dat_vector,0,(2*array_size_pow2+1)*sizeof(float));
        
        for (slice=0; slice< sizes[xyzv[VIO_Z]]; slice++) {        /* extract the slice vector */
          dat_vector[1 +2*(slice+data_offset) ] = *f_ptr;
          f_ptr += slice_size;
        }
        
        fft1(dat_vector,array_size_pow2,1);
        muli_vects(dat_vecto2,dat_vector,kern,array_size_pow2);
        fft1(dat_vecto2,array_size_pow2,-1);
        
        f_ptr = fdata + col*col_size + row;
        
        for (slice=0; slice< sizes[xyzv[VIO_Z]]; slice++) {        /* put the vector back */
          
          vindex = 1 + 2*(slice+data_offset);
          
          *f_ptr = dat_vecto2[vindex]/array_size_pow2;
          
          if (max_val<*f_ptr) max_val = *f_ptr;
          if (min_val>*f_ptr) min_val = *f_ptr;
          
          f_ptr += slice_size;
        }
        
        
      }
      update_progress_report( &progress, col + 2*sizes[xyzv[VIO_Z]] + 1 );
      
    }
    
  }  /* if ndim */
  else {
    max_val = 0.00001;
    min_val = 0.00000;
    
    for (col = 0; col < sizes[xyzv[VIO_X]]; col++) {      /* for each column */
      for (row = 0; row < sizes[xyzv[VIO_Y]]; row++) {           /* for each row   */
        *f_ptr = 0.0;
        f_ptr++;
      }
    }
  }
  
  
  FREE(dat_vector);
  FREE(dat_vecto2);
  FREE(kern      );
  
  
/* set up the correct info to copy the data back out in mnc */

  f_ptr = fdata;
  
  set_volume_real_range(data, min_val, max_val);


  printf("Making byte volume dz..." );
  for(slice=0; slice<sizes[xyzv[VIO_Z]]; slice++) {
    pos[xyzv[VIO_Z]] = slice;
    for(row=0; row<sizes[xyzv[VIO_Y]]; row++) {
      pos[xyzv[VIO_Y]] = row;
      for(col=0; col<sizes[xyzv[VIO_X]]; col++) {
        pos[xyzv[VIO_X]] = col;
        tmp = CONVERT_VALUE_TO_VOXEL(data, *f_ptr);
        SET_VOXEL_3D( data, pos[0], pos[1], pos[2], tmp);
        f_ptr++;
      }
    }
  }

  if (!curvature_flg)
    sprintf(full_outfilename,"%s_dz.mnc",outfile);
  else
    sprintf(full_outfilename,"%s_dzz.mnc",outfile);


  if (debug)
    print ("dz: min = %f, max = %f\n",min_val, max_val);

  status = output_modified_volume(full_outfilename, NC_UNSPECIFIED, FALSE, 
                                  min_val, max_val, data, infile, history, NULL);

  if (status != OK)
    print_error_and_line_num("problems writing dz gradient data...",__FILE__, __LINE__);



  terminate_progress_report( &progress );

  FREE(fdata);

  return(status);
  
}
コード例 #5
0
ファイル: test.c プロジェクト: rennone/Cpp
int main(void)
{
	static double ar[8] = { 0., 0., 0., 1., 1., 0., 0., 0.};
	static double ai[8] = { 0., 0., 0., 0., 0., 0., 0., 0.};
	static double ar2[16] = { 0., 0., 0., 0., 0., 1., 1., 0.,
							  0., 1., 1., 0., 0., 0., 0., 0.};
	static double ai2[16] = { 0., 0., 0., 0., 0., 0., 0., 0.,
							  0., 0., 0., 0., 0., 0., 0., 0.};
	Complex a[8], a2[16];
	int flag, i, iter, j, k, n, nmax;

	iter = 0;
	n = 8;
#ifndef CPX
	for(i = 0; i < n; i++)
          a[i] = tocomplex(ar[i], ai[i]);
	print(ar, ai, n);
#else
	printx(a, n);
#endif

/* forward FFT */
	flag = 0;
#ifndef CPX
	fft1(ar, ai, n, iter, flag);
	print(ar, ai, n);
#else
	fft1x(a, n, iter, flag);
	printx(a, n);
#endif

/* reverse FFT */
	flag = 1;
#ifndef CPX
	fft1(ar, ai, n, iter, flag);
	print(ar, ai, n);
#else
	fft1x(a, n, iter, flag);
	printx(a, n);
#endif
	n = nmax = 4;
	for(i = k = 0; i < n; i++)
          for(j = 0; j < n; j++, k++)
            a2[k] = tocomplex(ar2[k], ai2[k]);
#ifndef CPX
	print2(ar2, ai2, n, nmax);
#else
	print2x(a2, n, nmax);
#endif
	flag = 0;
#ifndef CPX
	fft2(ar2, ai2, n, nmax, flag);
	print2(ar2, ai2, n, nmax);
#else
	fft2x(a2, n, nmax, flag);
	print2x(a2, n, nmax);
#endif
	flag = 1;
#ifndef CPX
	fft2(ar2, ai2, n, nmax, flag);
	print2(ar2, ai2, n, nmax);
#else
	fft2x(a2, n, nmax, flag);
	print2x(a2, n, nmax);
#endif
	return 1;
}
コード例 #6
0
ファイル: Mautofocusing.c プロジェクト: 1014511134/src
int main(int argc, char* argv[])
{

	bool verb,conj,twin,pandq,Gtot,Htot;
	
    /* OMP parameters */
	#ifdef _OPENMP
    int ompnth;
	#endif 	
	
	float	*pplus0, *pplus, *pplusinv, *pplustemp, *Pplus, *Pplus_trace, *pminus, *Pminus, *Refl, *Gp, *Gm, *G, *H;
	float	*qplus, *qplusinv, *qplustemp, *Qplus, *Qplus_trace, *qminus, *Qminus;
	float	*window, *taper, pi;
	int		*tw;

    /* I/O files */
    sf_file Fplus;
    sf_file FRefl;
    sf_file FGp;
    sf_file FGm;
    sf_file FG;
    sf_file FH;
    sf_file Ftwin;
    sf_file Fp;
    sf_file Fq;

	char *filename1, filename2[256], filename3[256];
	
	/* Cube axes */
    sf_axis at,af,ax;

    int     nt,nf,ntr,mode,nshots,niter,len;
    int     i,it,ix,ishot,iter,i0;
	int		twc, twa, shift, n[2], rect[2], s[2];
    float   scale,eps,dt,df,dx,ot,of,a,b,c,d,e,f;

	sf_triangle tr;

    /*------------------------------------------------------------*/
    /* Initialize RSF parameters 								  */
    /*------------------------------------------------------------*/
    sf_init(argc,argv);	
	
    /*------------------------------------------------------------*/
    /* Initialize OMP parameters */
    /*------------------------------------------------------------*/
	#ifdef _OPENMP
    ompnth=omp_init();
	#endif	

	/*------------------------------------------------------------*/
	/* Flags 													  */
	/*------------------------------------------------------------*/
    if(! sf_getbool("verb",&verb)) verb=false; /* verbosity flag */
    if(! sf_getbool("conj",&conj)) conj=false; /* complex conjugation (time-reversal) flag */
    if(! sf_getbool("twin",&twin)) twin=false; /* returns the timewindow as one of the outputs */
    if(! sf_getbool("pandq",&pandq)) pandq=false; /* pandq=true: returns p and q */
    if(! sf_getbool("Gtot",&Gtot)) Gtot=false; /* Gtot=true: returns G=Gp+Gm */
    if(! sf_getbool("Htot",&Htot)) Htot=false; /* Htot=true: returns H=Gp-Gm */
    if(! sf_getint("niter",&niter)) niter=1; /* number of iterations */
    if(! sf_getint("nshots",&nshots)) nshots=1; /* number of shots */
    if(! sf_getfloat("scale",&scale)) scale=1.0; /* scale factor */
	if(! sf_getfloat("eps",&eps)) eps=1e-4; /* threshold for the timewindow */
	if(! sf_getint("shift",&shift)) shift=5; /* shift in samples for the timewindow */
    
	if (verb) {
		fprintf(stderr,"This program was called with \"%s\".\n",argv[0]);
		/*fprintf(stderr,"Nr: %d Nx: %d Nt:%d\n",nr,nx,nt);*/
		
		if (argc > 1) {
			for (i = 1; i<argc; i++) {
				fprintf(stderr,"argv[%d] = %s\n", i, argv[i]);
			}
		}
		else {
			fprintf(stderr,"The command had no other arguments.\n");
    	}	
	}

    /*------------------------------------------------------------*/
    /* I/O files 												  */
    /*------------------------------------------------------------*/	
	/* "in" is the transposed version of p00plus_xxxx_xxxx.rsf
	   Dimensions of p00plus_xxxx_xxxx.rsf BEFORE sftransp: n1=ntr,n2=nt
	   Dimensions of p00plus_xxxx_xxxx.rsf BEFORE sftransp: n1=nt,n2=ntr */
	Fplus = sf_input("in");
	
	/* refl is REFL_000.rsf
	   It is used to read nf, df, of
	  Dimensions are: n1=nf,n2=ntr */
	/*FRefl = (sf_file)sf_alloc(1,sizeof(sf_file));*/	
	FRefl = sf_input("refl");

	FGp = sf_output("out");
	FGm = sf_output("Gm");
	
	if (Gtot) {
		FG  = sf_output("G");
	}
	
	if (Htot) {
		FH  = sf_output("H");
	}
	
	if (pandq) {
		Fp = sf_output("p");
		Fq = sf_output("q");
	}
	
	if (twin) {
		Ftwin = sf_output("window"); /* time window */
	}
	
	/*------------------------------------------------------------*/
	/* Axes */
	/*------------------------------------------------------------*/    
	at = sf_iaxa(Fplus,1); sf_setlabel(at,"Time"); if(verb) sf_raxa(at); /* time */
	af = sf_iaxa(FRefl,1); sf_setlabel(af,"Frequency"); if(verb) sf_raxa(af); /* frequency */
	ax = sf_iaxa(Fplus,2); sf_setlabel(ax,"r"); if(verb) sf_raxa(ax); /* space */
    
	nt = sf_n(at); dt = sf_d(at); ot = sf_o(at);
	nf = sf_n(af); df = sf_d(af); of = sf_o(af);
	ntr = sf_n(ax); dx = sf_d(ax);
	
	if (verb) fprintf(stderr,"nt: %d nf: %d ntr:%d\n",nt,nf,ntr);

	sf_fileclose(FRefl);

    /*------------------------------------------------------------*/
    /* Setup output data and wavefield header					  */
    /*------------------------------------------------------------*/
	sf_oaxa(FGp,at,1);
	sf_oaxa(FGp,ax,2);
	sf_oaxa(FGm,at,1);
	sf_oaxa(FGm,ax,2);
	if (Gtot) {
		sf_oaxa(FG,at,1);
		sf_oaxa(FG,ax,2);
	}
	
	if (Htot) {
		sf_oaxa(FH,at,1);
		sf_oaxa(FH,ax,2);
	}
	
	if (pandq) {
		sf_oaxa(Fp,at,1);
		sf_oaxa(Fp,ax,2);
		sf_oaxa(Fq,at,1);
		sf_oaxa(Fq,ax,2);
	}

	if (twin) {
		sf_oaxa(Ftwin,at,1);
		sf_oaxa(Ftwin,ax,2);
	}

    /*------------------------------------------------------------*/
    /* Allocate arrays											  */
    /*------------------------------------------------------------*/
	
	/* Downgoing wavefields - Time */
	pplus0 = (float *)calloc(nt*ntr,sizeof(float));
	sf_floatread(pplus0,nt*ntr,Fplus);
	pplus = (float *)calloc(nt*ntr,sizeof(float));
	memcpy(pplus,pplus0,nt*ntr*sizeof(float));
	pplustemp = (float *)calloc(nt*ntr,sizeof(float));
	pplusinv = (float *)calloc(nt*ntr,sizeof(float));
	qplus = (float *)calloc(nt*ntr,sizeof(float));
	qplustemp = (float *)calloc(nt*ntr,sizeof(float));

	/* Downgoing wavefields - Frequency */
	Pplus = (float *)calloc(2*nf*ntr,sizeof(float));
	Qplus = (float *)calloc(2*nf*ntr,sizeof(float));

	/* The three flags of fft1 are: inv, sym, and opt */
	fft1(pplus0,Pplus,Fplus,0,0,1);
	memcpy(Qplus,Pplus,2*nf*ntr*sizeof(float));
	
	/* Upgoing wavefields - Time */
	pminus = (float *)calloc(nt*ntr,sizeof(float));
	qminus = (float *)calloc(nt*ntr,sizeof(float));

	/* Downgoing wavefields - Frequency */
	Pminus = (float *)calloc(2*nf*ntr,sizeof(float));
	Qminus = (float *)calloc(2*nf*ntr,sizeof(float));

	/* This is currently NOT used */
	/* Transpose of p00plus_xxxx_xxxx */
	for (ix=0; ix<ntr; ix++) {
		for (it=0; it<nt; it++) {
			pplusinv[ix*ntr+it]=pplus0[it*ntr+ix];
		}
	}

	/* Single trace (in frequency) of the downgoing wavefield */
	Pplus_trace = (float *)calloc(2*nf,sizeof(float));
	Qplus_trace = (float *)calloc(2*nf,sizeof(float));
	
	/* Output wavefields */
	Gp = (float *)calloc(nt*ntr,sizeof(float));
	Gm = (float *)calloc(nt*ntr,sizeof(float));
	if (Gtot) {
		G = (float *)calloc(nt*ntr,sizeof(float));
	}
	
	if (Htot) {
		H = (float *)calloc(nt*ntr,sizeof(float));
	}
	
	/* Time-reversal flag */
	if (conj) {
		mode = -1;
	}
	else {
		mode = +1;
	}
    
	/* Load the reflection response into the memory */
	if (verb) fprintf(stderr,"Before loading R %d\n",2*nf*ntr);
	Refl = (float *)calloc(2*nf*ntr*nshots,sizeof(float));
	
	/* Read REFL_000.rsf */
	filename1 = sf_getstring("refl");
	/* 000.rsf are 7 characters */
	len = strlen(filename1)-7;
	/* copy the filename without 000.rsf */
	strncpy(filename2,filename1,len);
	filename2[len] = '\0';
	if (verb) fprintf(stderr,"filename2 is: %s and len is: %d\n",filename2,len);
	/*if (NULL == filename1) {
		fprintf(stderr,"Cannot read header file %s",filename1);
	}*/
  
	for (ishot=0; ishot<nshots; ishot++) {
		
	  	/* write xxx.rsf in the string filename3 */
		sprintf(filename3,"%03d.rsf",ishot);
		for (i=0; i<7; i++)
			filename2[len+i] = filename3[i];
			filename2[len+7] = '\0';
		if (verb) fprintf(stderr,"Loading %s in memory\n",filename2);
	  	FRefl = sf_input(filename2);
    	sf_floatread(&Refl[ishot*2*nf*ntr],2*nf*ntr,FRefl);
		sf_fileclose(FRefl);
		/*if (verb) fprintf(stderr,"Iteration %d\n",ishot);*/
	}

	/* Build time-window */
	tw = (int *)calloc(ntr,sizeof(int));
	window = (float *)calloc(nt*ntr,sizeof(float));
	/*memset(window,0,nt*ntr*sizeof(float));*/
    /* I am not sure why I set it to this value */
	/*for (ix=0; ix<ntr; ix++) {
		tw[ix] = nt*dt+ot+0.15; 
	}*/
	
	if (verb) fprintf(stderr,"Build the time-window\n");
	for (ix=0; ix<ntr; ix++) {
		for (it=0; it<nt; it++) {
			if (pplus0[it+ix*nt]>eps) {
				/*tw[ix] = it*dt+ot;*/
				tw[ix] = it;
				/*if (verb) fprintf(stderr,"%d %d\n",ix,it);*/
				break;
			}
		}
	}
	for (ix=0; ix<ntr; ix++) {
		twc = (int)(tw[ix]-shift);
		twa = (int)(-twc+shift+nt);
		/*if (verb) fprintf(stderr,"%d %d\n",twc,twa);*/
		for (it=0; it<nt; it++) {
			if ((it<twc) || (it>twa)) {
				window[it+ix*nt] = 1.0;
			}
		}
	}

	/* Smoothing of the window */
	/* Should I implement flags for rect and iter? */
	/* Look at Msmooth.c to understand below */
	n[0] = nt;
	n[1] = ntr;
	s[0] = 1;
	s[1] = nt;
	rect[0] = 5;
	rect[1] = 5;

	for (ix=0; ix <= 1; ix++) {
		if (rect[ix] <= 1) continue;
		tr = sf_triangle_init (rect[ix],n[ix],false);
		for (it=0; it < (nt*ntr/n[ix]); it++) {
			i0 = sf_first_index (ix,it,1+1,n,s);
			for (iter=0; iter < 2; iter++) {
				sf_smooth2 (tr,i0,s[ix],false,window);
			}
		}
		sf_triangle_close(tr);
	}
	
	/* Tapering */
	pi = 4.0*atan(1.0);
	/*fprintf(stderr,"pi: %f\n",pi);
	fprintf(stderr,"ntr: %d\n",ntr);*/
	
	taper = (float *)calloc(ntr,sizeof(float));
	memset(taper,0,ntr*sizeof(float));

		
	for (ix=0; ix<151; ix++) {
		taper[ix] = (float)(0.5*(1.0-cos(2.0*pi*(ix-0.0)/300)));
		taper[ntr-ix-1] = taper[ix];
	}
	/*for (ix=(ntr-1); ix>(701-151-1); ix--) {
		taper[ix] = (float)(0.5*(1.0-cos(2.0*pi*(ix-0.0)/300)));

	}*/
	for (ix=151; ix<(ntr-151); ix++) {
		taper[ix] = 1.0;
	}
	/*for (ix=0; ix<ntr; ix++) {
		fprintf(stderr,"taper[%d]: %f\n",ix,taper[ix]);
	}*/
	
	FRefl = sf_input("refl");

	/*------------------------------------------------------------*/
	/* Loop over iterations */
	/*------------------------------------------------------------*/
	if (verb) fprintf(stderr,"Beginning of loop over iterations\n");
    for (iter=0; iter<niter; iter++) {
	
	/* Set Pminus and Qminus to 0 */
	memset(Pminus,0,2*nf*ntr*sizeof(float));
	memset(Qminus,0,2*nf*ntr*sizeof(float));

		/*------------------------------------------------------------*/
		/* Loop over shot positions */
		/*------------------------------------------------------------*/
		if (verb) fprintf(stderr,"Beginning of loop over shot positions\n");
		for (ishot=0; ishot<nshots; ishot++) {
   	
			/* Loop over receivers (traces) */
			#ifdef _OPENMP
			#pragma omp parallel for private(ix,it,a,b,c,d,e,f) \
				shared(Pminus,Qminus,Pplus,Qplus,taper,Refl)
			#endif 	
		  	for (ix=0; ix<ntr; ix++) {
				/* Loop over frequencies */
				#pragma ivdep
				for (it=0; it<2*nf; it=it+2) {
					
					/*(x + yi)(u + vi) = (xu - yv) + (xv + yu)i*/
					a = Refl[ix*2*nf+it+ishot*2*nf*ntr]*taper[ishot];
					b = Refl[ix*2*nf+it+1+ishot*2*nf*ntr]*taper[ishot];
					c = Pplus[ishot*2*nf+it];
					d = Pplus[ishot*2*nf+it+1];
					e = Qplus[ishot*2*nf+it];
					f = Qplus[ishot*2*nf+it+1];

					Pminus[ix*2*nf+it]   += a*c - mode*b*d;
					Pminus[ix*2*nf+it+1] += mode*a*d + b*c;
					
					Qminus[ix*2*nf+it]   += a*e - mode*b*f;
					Qminus[ix*2*nf+it+1] += mode*a*f + b*e;
				
				} /* End of loop over frequencies */	
			} /* End of loop over receivers (traces) */
			
			if (verb) if(ishot%50==0) fprintf(stderr,"Trace %d\n",ishot);

		} /* End of loop over shot positions */

		/* Save a copy of pplus and qplus before creating their next iteration */
		memcpy(pplustemp,pplus,nt*ntr*sizeof(float));
		memcpy(qplustemp,qplus,nt*ntr*sizeof(float));

		/* Build the next iteration of Pplus and Qplus */
		fft1(Pminus,pminus,FRefl,1,0,1);
		fft1(Qminus,qminus,FRefl,1,0,1);
		
		if (verb) fprintf(stderr,"Build the next iteration of pplus and qplus\n");
		#ifdef _OPENMP
		#pragma omp parallel for private(ix,it) \
			shared(pminus,qminus,pplus,qplus,pplus0,window)
		#endif
		for (ix=0; ix<ntr; ix++) {
			#pragma ivdep
			for (it=0; it<nt; it++) {
				pplus[it+ix*nt] = pplus0[it+ix*nt] - scale*window[it+ix*nt]*pminus[it+ix*nt];
				qplus[it+ix*nt] = pplus0[it+ix*nt] + scale*window[it+ix*nt]*qminus[it+ix*nt];
			}	
		}
		
		fft1(pplus,Pplus,Fplus,0,0,1);
		fft1(qplus,Qplus,Fplus,0,0,1);

		if (verb) fprintf(stderr,"%d %d\n",ix,it);

		if(iter%10==0) fprintf(stderr,"Iteration %d\n",iter);

	} /* End of loop over iterations */ 
	
	/* Build Gp and Gm */
	if (verb) fprintf(stderr,"Build Gp and Gm\n");
	#ifdef _OPENMP
	#pragma omp parallel for private(ix,it) \
		shared(Gp,Gm,G,H,pminus,qminus,pplustemp,qplustemp,pplus0)
	#endif
	for (ix=0; ix<ntr; ix++) {
		#pragma ivdep
		for (it=0; it<nt; it++) {
			Gp[it+ix*nt] = 0.5*( pplustemp[it+ix*nt] + scale*pminus[it+ix*nt] + qplustemp[it+ix*nt] - scale*qminus[it+ix*nt] );
			Gm[it+ix*nt] = 0.5*( pplustemp[it+ix*nt] + scale*pminus[it+ix*nt] - qplustemp[it+ix*nt] + scale*qminus[it+ix*nt] );
			if (Gtot) {
				G[it+ix*nt] = pplustemp[it+ix*nt] + scale*pminus[it+ix*nt];
			}
			if (Htot) {
				H[it+ix*nt] = qplustemp[it+ix*nt] - scale*qminus[it+ix*nt];
			}
			/*p[it+ix*nt] = 1.0*( pplus[it+ix*nt] + scale*pminus[it+ix*nt] );
			q[it+ix*nt] = 1.0*( qplus[it+ix*nt] - scale*qminus[it+ix*nt] );*/
		}	
	}

	/* Write the final result */
    /*FRefl = sf_input(argv[1]);*/
	/*fft1(Gp,,FRefl,1,0,0);
	fft1(Gm,,FRefl,1,0,0);*/
	
	sf_floatwrite(Gp,nt*ntr,FGp);
	sf_floatwrite(Gm,nt*ntr,FGm);
	if (Gtot) {
		sf_floatwrite(G,nt*ntr,FG);
		sf_fileclose(FG);
		free(G);
	}
	
	if (Htot) {
		sf_floatwrite(H,nt*ntr,FH);
		sf_fileclose(FH);
		free(H);
	}

	if (pandq) {
		sf_floatwrite(pplustemp,nt*ntr,Fp);
		sf_floatwrite(pminus,nt*ntr,Fq);
		sf_fileclose(Fp);
		sf_fileclose(Fq);
	}
	
	if (twin) {
		sf_floatwrite(window,nt*ntr,Ftwin);
		sf_fileclose(Ftwin);
	}
	sf_fileclose(Fplus);
	sf_fileclose(FRefl);
	sf_fileclose(FGp);
	sf_fileclose(FGm);
	
	free(Gp);
	free(Gm);
	free(pplus);
	free(pplusinv);
	free(pplustemp);
	free(Pplus);
	free(Pplus_trace);
	free(Pminus);
	free(qplus);
	free(qplustemp);
	free(Qplus);
	free(Qplus_trace);
	free(Qminus);
	free(Refl);
	free(window);
	free(tw);
	free(filename1);
	
    exit (0);
}
コード例 #7
0
ファイル: fft.c プロジェクト: Ntools/fft-lib-0.1
void fft2(double ar[], double ai[], int n, int nmax, int flag)
{
	int i, iter, j, k;
	double *p, *q, *wr, *wi;

	if(n < 2)
	{
		fprintf(stderr, "Error : Illegal parameter in fft2()\n");
		return;
	}
	iter = 0;
	i = n;
	while((i /= 2) != 0)	iter++;
	j = 1;
	for(i = 1; i <= iter; i++)	j *= 2;
	if(n != j)
	{
		fprintf(stderr, "Error : n != 2 ^ k  in fft2()\n");
		return;
	}
	wr = (double *)malloc(n * sizeof(double));
	if(wr == NULL)
	{
		fprintf(stderr, "Error : Out of memory  in fft2()\n");
		return;
	}
	wi = (double *)malloc(n * sizeof(double));
	if(wi == NULL)
	{
		fprintf(stderr, "Error : Out of memory  in fft2()\n");
		free((char *)wr);
		return;
	}

	for(j = 0; j < n; j++, k += nmax)
	{
		for(i = 0, p = ar + j, q = ai + j; i < n; i++, p += nmax, q += nmax)
		{
			*(wr + i) = *p;
			*(wi + i) = *q;
		}
		fft1(wr, wi, n, iter, flag);
		for(i = 0, p = ar + j, q = ai + j; i < n; i++, p += nmax, q += nmax)
		{
			*p = *(wr + i);
			*q = *(wi + i);
		}
	}
	for(i = k = 0; i < n; i++, k += nmax)
	{
		for(j = 0, p = ar + k, q = ai + k; j < n; j++)
		{
			*(wr + j) = *p++;
			*(wi + j) = *q++;
		}
		fft1(wr, wi, n, iter, flag);
		for(j = 0, p = ar + k, q = ai + k; j < n; j++)
		{
			*p++ = *(wr + j);
			*q++ = *(wi + j);
		}
	}
	free((char *)wr);
	free((char *)wi);
	return;
}