コード例 #1
0
void
test_basic(const size_t n, const double data[], const double tol)
{
  gsl_rstat_workspace *rstat_workspace_p = gsl_rstat_alloc();
  const double expected_mean = gsl_stats_mean(data, 1, n);
  const double expected_var = gsl_stats_variance(data, 1, n);
  const double expected_sd = gsl_stats_sd(data, 1, n);
  const double expected_sd_mean = expected_sd / sqrt((double) n);
  const double expected_skew = gsl_stats_skew(data, 1, n);
  const double expected_kurtosis = gsl_stats_kurtosis(data, 1, n);
  double expected_rms = 0.0;
  double mean, var, sd, sd_mean, rms, skew, kurtosis;
  size_t i, num;
  int status;

  /* compute expected rms */
  for (i = 0; i < n; ++i)
    expected_rms += data[i] * data[i];

  expected_rms = sqrt(expected_rms / n);

  /* add data to rstat workspace */
  for (i = 0; i < n; ++i)
    gsl_rstat_add(data[i], rstat_workspace_p);

  mean     = gsl_rstat_mean(rstat_workspace_p);
  var      = gsl_rstat_variance(rstat_workspace_p);
  sd       = gsl_rstat_sd(rstat_workspace_p);
  sd_mean  = gsl_rstat_sd_mean(rstat_workspace_p);
  rms      = gsl_rstat_rms(rstat_workspace_p);
  skew     = gsl_rstat_skew(rstat_workspace_p);
  kurtosis = gsl_rstat_kurtosis(rstat_workspace_p);
  num      = gsl_rstat_n(rstat_workspace_p);

  gsl_test_int(num, n, "n n=%zu" , n);
  gsl_test_rel(mean, expected_mean, tol, "mean n=%zu", n);
  gsl_test_rel(var, expected_var, tol, "variance n=%zu", n);
  gsl_test_rel(sd, expected_sd, tol, "stddev n=%zu", n);
  gsl_test_rel(sd_mean, expected_sd_mean, tol, "stddev_mean n=%zu", n);
  gsl_test_rel(rms, expected_rms, tol, "rms n=%zu", n);
  gsl_test_rel(skew, expected_skew, tol, "skew n=%zu", n);
  gsl_test_rel(kurtosis, expected_kurtosis, tol, "kurtosis n=%zu", n);

  status = gsl_rstat_reset(rstat_workspace_p);
  gsl_test_int(status, GSL_SUCCESS, "rstat returned success");
  num = gsl_rstat_n(rstat_workspace_p);

  gsl_test_int(num, 0, "n n=%zu" , n);

  gsl_rstat_free(rstat_workspace_p);
}
コード例 #2
0
ファイル: test.c プロジェクト: gaponenko/gsl
void
test_basic(const size_t n, const double data[], const double tol)
{
  gsl_rstat_workspace *rstat_workspace_p = gsl_rstat_alloc();
  const double expected_mean = gsl_stats_mean(data, 1, n);
  const double expected_var = gsl_stats_variance(data, 1, n);
  const double expected_sd = gsl_stats_sd(data, 1, n);
  const double expected_skew = gsl_stats_skew(data, 1, n);
  const double expected_kurtosis = gsl_stats_kurtosis(data, 1, n);
  double expected_rms = 0.0;
  double mean, var, sd, rms, skew, kurtosis;
  size_t i;

  /* compute expected rms */
  for (i = 0; i < n; ++i)
    expected_rms += data[i] * data[i];

  expected_rms = sqrt(expected_rms / n);

  /* add data to rstat workspace */
  for (i = 0; i < n; ++i)
    gsl_rstat_add(data[i], rstat_workspace_p);

  mean = gsl_rstat_mean(rstat_workspace_p);
  var = gsl_rstat_variance(rstat_workspace_p);
  sd = gsl_rstat_sd(rstat_workspace_p);
  rms = gsl_rstat_rms(rstat_workspace_p);
  skew = gsl_rstat_skew(rstat_workspace_p);
  kurtosis = gsl_rstat_kurtosis(rstat_workspace_p);

  gsl_test_rel(mean, expected_mean, tol, "mean n=%zu", n);
  gsl_test_rel(var, expected_var, tol, "variance n=%zu", n);
  gsl_test_rel(sd, expected_sd, tol, "stddev n=%zu", n);
  gsl_test_rel(rms, expected_rms, tol, "rms n=%zu", n);
  gsl_test_rel(skew, expected_skew, tol, "skew n=%zu", n);
  gsl_test_rel(kurtosis, expected_kurtosis, tol, "kurtosis n=%zu", n);

  gsl_rstat_free(rstat_workspace_p);
}
コード例 #3
0
int
main()
{
  gsl_rng *r = gsl_rng_alloc(gsl_rng_default);
  const double tol1 = 1.0e-8;
  const double tol2 = 1.0e-3;

  gsl_ieee_env_setup();

  {
    const size_t N = 2000000;
    double *data = random_data(N, r);
    double data2[] = { 4.0, 7.0, 13.0, 16.0 };
    size_t i;

    test_basic(2, data, tol1);
    test_basic(100, data, tol1);
    test_basic(1000, data, tol1);
    test_basic(10000, data, tol1);
    test_basic(50000, data, tol1);
    test_basic(80000, data, tol1);
    test_basic(1500000, data, tol1);
    test_basic(2000000, data, tol1);

    for (i = 0; i < 4; ++i)
      data2[i] += 1.0e9;

    test_basic(4, data2, tol1);

    free(data);
  }

  {
    /* dataset from Jain and Chlamtac paper */
    const size_t n_jain = 20;
    const double data_jain[] = {  0.02,  0.15,  0.74,  3.39,  0.83,
                                  22.37, 10.15, 15.43, 38.62, 15.92,
                                  34.60, 10.28,  1.47,  0.40,  0.05,
                                  11.39,  0.27,  0.42,  0.09, 11.37 };
    double expected_jain = 4.44063435326;
  
    test_quantile(0.5, data_jain, n_jain, expected_jain, tol1, "jain");
  }

  {
    size_t n = 1000000;
    double *data = malloc(n * sizeof(double));
    double *sorted_data = malloc(n * sizeof(double));
    gsl_rstat_workspace *rstat_workspace_p = gsl_rstat_alloc();
    double p;
    size_t i;

    for (i = 0; i < n; ++i)
      {
        data[i] = gsl_ran_gaussian_tail(r, 1.3, 1.0);
        gsl_rstat_add(data[i], rstat_workspace_p);
      }

    memcpy(sorted_data, data, n * sizeof(double));
    gsl_sort(sorted_data, 1, n);

    /* test quantile calculation */
    for (p = 0.1; p <= 0.9; p += 0.1)
      {
        double expected = gsl_stats_quantile_from_sorted_data(sorted_data, 1, n, p);
        test_quantile(p, data, n, expected, tol2, "gauss");
      }

    /* test mean, variance */
    {
      const double expected_mean = gsl_stats_mean(data, 1, n);
      const double expected_var = gsl_stats_variance(data, 1, n);
      const double expected_sd = gsl_stats_sd(data, 1, n);
      const double expected_skew = gsl_stats_skew(data, 1, n);
      const double expected_kurtosis = gsl_stats_kurtosis(data, 1, n);
      const double expected_median = gsl_stats_quantile_from_sorted_data(sorted_data, 1, n, 0.5);

      const double mean = gsl_rstat_mean(rstat_workspace_p);
      const double var = gsl_rstat_variance(rstat_workspace_p);
      const double sd = gsl_rstat_sd(rstat_workspace_p);
      const double skew = gsl_rstat_skew(rstat_workspace_p);
      const double kurtosis = gsl_rstat_kurtosis(rstat_workspace_p);
      const double median = gsl_rstat_median(rstat_workspace_p);

      gsl_test_rel(mean, expected_mean, tol1, "mean");
      gsl_test_rel(var, expected_var, tol1, "variance");
      gsl_test_rel(sd, expected_sd, tol1, "stddev");
      gsl_test_rel(skew, expected_skew, tol1, "skew");
      gsl_test_rel(kurtosis, expected_kurtosis, tol1, "kurtosis");
      gsl_test_abs(median, expected_median, tol2, "median");
    }

    free(data);
    free(sorted_data);
    gsl_rstat_free(rstat_workspace_p);
  }

  gsl_rng_free(r);

  exit (gsl_test_summary());
}