TKmerMapSimple
kmerify_graph_simple(String<TVertexDescriptor const> const & order,
TGraph const & graph,
std::vector<VertexLabels> & vertex_vector,
boost::unordered_set<TVertexDescriptor> const & free_nodes,
boost::unordered_map< std::pair<TVertexDescriptor, TVertexDescriptor>, boost::dynamic_bitset<> > & edge_ids,
int const & kmer_size
)
{
TKmerMapSimple kmer_map;
for (Iterator<String<TVertexDescriptor const> const>::Type it = begin(order) ; it != end(order) ; ++it)
{
TVertexDescriptor const & source_vertex = *it;
if (free_nodes.count(source_vertex) == 0)
{
boost::dynamic_bitset<> id_bits(edge_ids.begin()->second.size());
id_bits.flip();
check_kmers_simple(vertex_vector[source_vertex].dna, graph, source_vertex, vertex_vector, free_nodes, edge_ids, id_bits, kmer_map, static_cast<std::size_t>(kmer_size));
}
}
return kmer_map;
}
TKmerMap
kmerifyGraph(String<TVertexDescriptor const> const & order,
TGraph const & graph,
std::vector<VertexLabels> & vertex_vector,
boost::unordered_set<TVertexDescriptor> const & free_nodes,
boost::unordered_map< std::pair<TVertexDescriptor, TVertexDescriptor>, boost::dynamic_bitset<> > & edge_ids,
int const & kmer_size
)
{
TKmerMap kmer_map;
for (Iterator<String<TVertexDescriptor const> const>::Type it = begin(order) ; it != end(order) ; ++it)
{
TVertexDescriptor const & source_vertex = *it;
if (free_nodes.count(source_vertex) == 0)
{
boost::dynamic_bitset<> id_bits(edge_ids.begin()->second.size());
id_bits.flip();
checkKmers(vertex_vector[source_vertex].dna, source_vertex, source_vertex, graph, vertex_vector, free_nodes, edge_ids, id_bits, kmer_map, static_cast<std::size_t>(kmer_size));
// std::cout << "source_vertex = " << source_vertex << " kmer_map.size() = " << kmer_map.size() << " kmer_size = " << kmer_size;
// std::cout << " vertex_vector[source_vertex].level = " << vertex_vector[source_vertex].level << std::endl;
}
}
return kmer_map;
}
void VelocityTracker::addPosition(int timeStamp, int pointerId, float x, float y) {
TimeTicks event_time(TimeTicks::FromInternalValue(timeStamp));
BitSet32 id_bits(BitSet32::value_for_bit(pointerId));
PointerXY position = {x, y};
AddMovement(event_time, id_bits, &position);
}
