コード例 #1
0
ファイル: cIGraph_centrality.c プロジェクト: 97jaz/igraph
/* call-seq:
 *   graph.pagerank(vs,mode,niter,eps,damping) -> Array
 *
 * Returns an Array of PageRank measures for the vertices 
 * in the graph. mode defines whether directed paths or considered for 
 * directed graphs.
 */
VALUE cIGraph_pagerank(VALUE self, VALUE vs, VALUE directed, VALUE niter, VALUE eps, VALUE damping){

  igraph_t *graph;
  igraph_vs_t vids;
  igraph_vector_t vidv;
  igraph_vector_t res;
  int i;
  VALUE pagerank = rb_ary_new();
  igraph_bool_t dir = 0;

  if(directed == Qtrue)
    dir = 1;

  //vector to hold the results of the degree calculations
  igraph_vector_init_int(&res,0);

  Data_Get_Struct(self, igraph_t, graph);

  //Convert an array of vertices to a vector of vertex ids
  igraph_vector_init_int(&vidv,0);
  cIGraph_vertex_arr_to_id_vec(self,vs,&vidv);
  //create vertex selector from the vecotr of ids
  igraph_vs_vector(&vids,&vidv);

  igraph_pagerank_old(graph,&res,vids,dir,
		  NUM2INT(niter),NUM2DBL(eps),NUM2DBL(damping),0);

  for(i=0;i<igraph_vector_size(&res);i++){
    rb_ary_push(pagerank,rb_float_new(VECTOR(res)[i]));
  }

  igraph_vector_destroy(&vidv);
  igraph_vector_destroy(&res);
  igraph_vs_destroy(&vids);

  return pagerank;

}
コード例 #2
0
ファイル: igraph_pagerank.c プロジェクト: AlessiaWent/igraph
int main() {

  igraph_t g;
  igraph_vector_t v, res, reset, weights;
  igraph_arpack_options_t arpack_options;
  igraph_real_t value;
  int ret;
  igraph_pagerank_power_options_t power_options;

  /* Test graphs taken from http://www.iprcom.com/papers/pagerank/ */
  igraph_vector_init(&v, 10);
  VECTOR(v)[0]=0; VECTOR(v)[1]=1;
  VECTOR(v)[2]=1; VECTOR(v)[3]=2;
  VECTOR(v)[4]=2; VECTOR(v)[5]=0;
  VECTOR(v)[6]=3; VECTOR(v)[7]=2;
  VECTOR(v)[8]=0; VECTOR(v)[9]=2;
  igraph_create(&g, &v, 0, 1);

  igraph_vector_init(&res, 0);
  oldwarn=igraph_set_warning_handler(warning_handler_stdout);
  igraph_pagerank_old(&g, &res, igraph_vss_all(), 1, 1000, 0.001, 0.85, 0);
  print_vector(&res, stdout);
  igraph_vector_destroy(&res);
  igraph_vector_destroy(&v);
  
  igraph_destroy(&g);

  igraph_vector_init(&v, 28);
  VECTOR(v)[ 0]=0; VECTOR(v)[ 1]=1;
  VECTOR(v)[ 2]=0; VECTOR(v)[ 3]=2;
  VECTOR(v)[ 4]=0; VECTOR(v)[ 5]=3;
  VECTOR(v)[ 6]=1; VECTOR(v)[ 7]=0;
  VECTOR(v)[ 8]=2; VECTOR(v)[ 9]=0;
  VECTOR(v)[10]=3; VECTOR(v)[11]=0;
  VECTOR(v)[12]=3; VECTOR(v)[13]=4;
  VECTOR(v)[14]=3; VECTOR(v)[15]=5;
  VECTOR(v)[16]=3; VECTOR(v)[17]=6;
  VECTOR(v)[18]=3; VECTOR(v)[19]=7;
  VECTOR(v)[20]=4; VECTOR(v)[21]=0;
  VECTOR(v)[22]=5; VECTOR(v)[23]=0;
  VECTOR(v)[24]=6; VECTOR(v)[25]=0;
  VECTOR(v)[26]=7; VECTOR(v)[27]=0;
  igraph_create(&g, &v, 0, 1);

  igraph_vector_init(&res, 0);
  igraph_pagerank_old(&g, &res, igraph_vss_all(), 1, 10000, 0.0001, 0.85, 0);
  print_vector(&res, stdout);
  igraph_vector_destroy(&res);
  igraph_vector_destroy(&v);
  igraph_destroy(&g);

  igraph_set_warning_handler(oldwarn);

  /* New PageRank */
  igraph_star(&g, 11, IGRAPH_STAR_UNDIRECTED, 0);
  igraph_vector_init(&res, 0);
  igraph_arpack_options_init(&arpack_options);
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_ARPACK, &res, 0,
		  igraph_vss_all(), 0, 0.85, 0, &arpack_options);
  print_vector(&res, stdout);
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_PRPACK, &res, 0,
		  igraph_vss_all(), 0, 0.85, 0, 0);
  print_vector(&res, stdout);
  /* Check twice more for consistency */
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_ARPACK, &res, 0,
		  igraph_vss_all(), 0, 0.85, 0, &arpack_options);
  print_vector(&res, stdout);
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_PRPACK, &res, 0,
		  igraph_vss_all(), 0, 0.85, 0, 0);
  print_vector(&res, stdout);

  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_ARPACK, &res, 0,
		  igraph_vss_all(), 0, 0.85, 0, &arpack_options);
  print_vector(&res, stdout);
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_PRPACK, &res, 0,
		  igraph_vss_all(), 0, 0.85, 0, 0);
  print_vector(&res, stdout);

  /* Check personalized PageRank */
  igraph_personalized_pagerank_vs(&g, IGRAPH_PAGERANK_ALGO_ARPACK, &res, 0,
				  igraph_vss_all(), 0, 0.5,
				  igraph_vss_1(1), 0, &arpack_options);
  print_vector(&res, stdout);
  igraph_personalized_pagerank_vs(&g, IGRAPH_PAGERANK_ALGO_PRPACK, &res, 0,
				  igraph_vss_all(), 0, 0.5,
				  igraph_vss_1(1), 0, 0);
  print_vector(&res, stdout);

  /* Errors */
  power_options.niter = -1; power_options.eps=0.0001;
  igraph_set_error_handler(igraph_error_handler_ignore);
  igraph_set_warning_handler(igraph_warning_handler_ignore);
  ret=igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_POWER, &res,
		      /*value=*/ 0, igraph_vss_all(), 1, 0.85,
		      /*weights=*/ 0, &power_options);
  if (ret != IGRAPH_EINVAL) {
    return 1;
  }
  
  power_options.niter=10000; power_options.eps=-1;
  ret=igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_POWER, &res,
		      /*value=*/ 0, igraph_vss_all(), 1, 0.85,
		      /*weights=*/ 0, &power_options);
  if (ret != IGRAPH_EINVAL) {
    return 2;
  }

  power_options.niter=10000; power_options.eps=0.0001;
  ret=igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_POWER, &res,
		      /*value=*/ 0, igraph_vss_all(), 1, 1.2,
		      /*weights=*/ 0, &power_options);
  if (ret != IGRAPH_EINVAL) {
    return 3;
  }

  igraph_vector_init(&reset, 2);
  ret=igraph_personalized_pagerank(&g, IGRAPH_PAGERANK_ALGO_ARPACK, &res, 0,
				   igraph_vss_all(), 0, 0.85, &reset, 0,
				   &arpack_options);
  if (ret != IGRAPH_EINVAL) {
    return 4;
  }
  ret=igraph_personalized_pagerank(&g, IGRAPH_PAGERANK_ALGO_PRPACK, &res, 0,
				   igraph_vss_all(), 0, 0.85, &reset, 0, 0);
  if (ret != IGRAPH_EINVAL) {
    return 4;
  }
  igraph_vector_resize(&reset, 10);
  igraph_vector_fill(&reset, 0);
  ret=igraph_personalized_pagerank(&g, IGRAPH_PAGERANK_ALGO_ARPACK,
				   &res, 0, igraph_vss_all(), 0, 0.85,
				   &reset, 0, &arpack_options);
  if (ret != IGRAPH_EINVAL) {
    return 5;
  }
  ret=igraph_personalized_pagerank(&g, IGRAPH_PAGERANK_ALGO_PRPACK,
				   &res, 0, igraph_vss_all(), 0, 0.85,
				   &reset, 0, 0);
  if (ret != IGRAPH_EINVAL) {
    return 5;
  }
  igraph_vector_destroy(&reset);
  igraph_destroy(&g);
  igraph_set_error_handler(igraph_error_handler_abort);

  /* Special cases: check for empty graph */
  igraph_empty(&g, 10, 0);
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_ARPACK, &res, &value,
		  igraph_vss_all(), 1, 0.85, 0, &arpack_options);
  if (value != 1.0) {
    return 6;
  }
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_PRPACK, &res, &value,
		  igraph_vss_all(), 1, 0.85, 0, 0);
  if (value != 1.0) {
    return 6;
  }
  print_vector(&res, stdout);
  igraph_destroy(&g);

  /* Special cases: check for full graph, zero weights */
  igraph_full(&g, 10, 0, 0);
  igraph_vector_init(&v, 45);
  igraph_vector_fill(&v, 0);
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_ARPACK, &res, &value,
		  igraph_vss_all(), 1, 0.85, &v, &arpack_options);
  if (value != 1.0) {
    return 7;
  }
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_PRPACK, &res, &value,
		  igraph_vss_all(), 1, 0.85, &v, 0);
  if (value != 1.0) {
    return 7;
  }
  igraph_vector_destroy(&v);
  print_vector(&res, stdout);
  igraph_destroy(&g);

  /* Another test case for PageRank (bug #792352) */
  igraph_small(&g, 9, 1, 0, 5, 1, 5, 2, 0, 3, 1, 5, 4, 5, 7, 6, 0, 8, 0, 8, 1, -1);
  igraph_vector_init(&weights, 9);
  VECTOR(weights)[0] = 4; VECTOR(weights)[1] = 5; VECTOR(weights)[2] = 5;
  VECTOR(weights)[3] = 4; VECTOR(weights)[4] = 4; VECTOR(weights)[5] = 4;
  VECTOR(weights)[6] = 3; VECTOR(weights)[7] = 4; VECTOR(weights)[8] = 4;
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_ARPACK, &res, 0,
		  igraph_vss_all(), 1, 0.85, &weights, &arpack_options);
  print_vector(&res, stdout);
  igraph_pagerank(&g, IGRAPH_PAGERANK_ALGO_PRPACK, &res, 0,
		  igraph_vss_all(), 1, 0.85, &weights, 0);
  print_vector(&res, stdout);
  igraph_vector_destroy(&weights);
  igraph_destroy(&g);

  igraph_vector_destroy(&res);
  return 0;
}