static double do_search(double y, double *z, double p, double n, double pr, double incr) { if(*z >= p) { /* search to the left */ #ifdef DEBUG_qbinom REprintf("\tnew z=%7g >= p = %7g --> search to left (y--) ..\n", z,p); #endif for(;;) { double newz; if(y == 0 || (newz = pbinom(y - incr, n, pr, /*l._t.*/TRUE, /*log_p*/FALSE)) < p) return y; y = fmax2(0, y - incr); *z = newz; } } else { /* search to the right */ #ifdef DEBUG_qbinom REprintf("\tnew z=%7g < p = %7g --> search to right (y++) ..\n", z,p); #endif for(;;) { y = fmin2(y + incr, n); if(y == n || (*z = pbinom(y, n, pr, /*l._t.*/TRUE, /*log_p*/FALSE)) >= p) return y; } } }
double F77_SUB(fpbinom)(double *q, double *size, double *prob, int *lowertail, int *logp ) { /* All debug printf("q = %e, size = %e, prob = %e\n",*q,*size,*prob); printf("lowertail = %d, log.p = %d\n",*lowertail, *logp); double res = pbinom(*q,*size,*prob, *lowertail, *logp); printf("res = %e\n",res);*/ return(pbinom(*q,*size,*prob, *lowertail, *logp)); }
double pztbinom(double x, double size, double prob, int lower_tail, int log_p) { #ifdef IEEE_754 if (ISNAN(x) || ISNAN(size) || ISNAN(prob)) return x + size + prob; #endif if (prob < 0 || prob > 1 || size < 1) return R_NaN; if (x < 1) return ACT_DT_0; if (!R_FINITE(x)) return ACT_DT_1; /* limiting cases as size -> 1 or prob -> 0 are point mass at one */ if (size == 1 || prob == 0) return (x >= 1) ? ACT_DT_1 : ACT_DT_0; double lp0 = dbinom_raw(0, size, prob, 1 - prob, /*give_log*/1); return ACT_DT_Cval(pbinom(x, size, prob, /*l._t.*/0, /*log_p*/0)/(-expm1(lp0))); }
double qbinom(double p, double n, double pr, int lower_tail, int log_p) { double q, mu, sigma, gamma, z, y; #ifdef IEEE_754 if (ISNAN(p) || ISNAN(n) || ISNAN(pr)) return p + n + pr; #endif if(!R_FINITE(n) || !R_FINITE(pr)) ML_ERR_return_NAN; /* if log_p is true, p = -Inf is a legitimate value */ if(!R_FINITE(p) && !log_p) ML_ERR_return_NAN; if(n != floor(n + 0.5)) ML_ERR_return_NAN; if (pr < 0 || pr > 1 || n < 0) ML_ERR_return_NAN; R_Q_P01_boundaries(p, 0, n); if (pr == 0. || n == 0) return 0.; q = 1 - pr; if(q == 0.) return n; /* covers the full range of the distribution */ mu = n * pr; sigma = sqrt(n * pr * q); gamma = (q - pr) / sigma; #ifdef DEBUG_qbinom REprintf("qbinom(p=%7g, n=%g, pr=%7g, l.t.=%d, log=%d): sigm=%g, gam=%g\n", p,n,pr, lower_tail, log_p, sigma, gamma); #endif /* Note : "same" code in qpois.c, qbinom.c, qnbinom.c -- * FIXME: This is far from optimal [cancellation for p ~= 1, etc]: */ if(!lower_tail || log_p) { p = R_DT_qIv(p); /* need check again (cancellation!): */ if (p == 0.) return 0.; if (p == 1.) return n; } /* temporary hack --- FIXME --- */ if (p + 1.01*DBL_EPSILON >= 1.) return n; /* y := approx.value (Cornish-Fisher expansion) : */ z = qnorm(p, 0., 1., /*lower_tail*/TRUE, /*log_p*/FALSE); y = floor(mu + sigma * (z + gamma * (z*z - 1) / 6) + 0.5); if(y > n) /* way off */ y = n; #ifdef DEBUG_qbinom REprintf(" new (p,1-p)=(%7g,%7g), z=qnorm(..)=%7g, y=%5g\n", p, 1-p, z, y); #endif z = pbinom(y, n, pr, /*lower_tail*/TRUE, /*log_p*/FALSE); /* fuzz to ensure left continuity: */ p *= 1 - 64*DBL_EPSILON; if(n < 1e5) return do_search(y, &z, p, n, pr, 1); /* Otherwise be a bit cleverer in the search */ { double incr = floor(n * 0.001), oldincr; do { oldincr = incr; y = do_search(y, &z, p, n, pr, incr); incr = fmax2(1, floor(incr/100)); } while(oldincr > 1 && incr > n*1e-15); return y; } }
double qbinom(double p, double n, double pr, int lower_tail, int log_p) { double q, mu, sigma, gamma, z, y; #ifdef IEEE_754 if (ISNAN(p) || ISNAN(n) || ISNAN(pr)) return p + n + pr; #endif if(!R_FINITE(p) || !R_FINITE(n) || !R_FINITE(pr)) ML_ERR_return_NAN; R_Q_P01_check(p); if(n != floor(n + 0.5)) ML_ERR_return_NAN; if (pr < 0 || pr > 1 || n < 0) ML_ERR_return_NAN; if (pr == 0. || n == 0) return 0.; if (p == R_DT_0) return 0.; if (p == R_DT_1) return n; q = 1 - pr; if(q == 0.) return n; /* covers the full range of the distribution */ mu = n * pr; sigma = sqrt(n * pr * q); gamma = (q - pr) / sigma; #ifdef DEBUG_qbinom REprintf("qbinom(p=%7g, n=%g, pr=%7g, l.t.=%d, log=%d): sigm=%g, gam=%g\n", p,n,pr, lower_tail, log_p, sigma, gamma); #endif /* Note : "same" code in qpois.c, qbinom.c, qnbinom.c -- * FIXME: This is far from optimal [cancellation for p ~= 1, etc]: */ if(!lower_tail || log_p) { p = R_DT_qIv(p); /* need check again (cancellation!): */ if (p == 0.) return 0.; if (p == 1.) return n; } /* temporary hack --- FIXME --- */ if (p + 1.01*DBL_EPSILON >= 1.) return n; /* y := approx.value (Cornish-Fisher expansion) : */ z = qnorm(p, 0., 1., /*lower_tail*/TRUE, /*log_p*/FALSE); y = floor(mu + sigma * (z + gamma * (z*z - 1) / 6) + 0.5); if(y > n) /* way off */ y = n; #ifdef DEBUG_qbinom REprintf(" new (p,1-p)=(%7g,%7g), z=qnorm(..)=%7g, y=%5g\n", p, 1-p, z, y); #endif z = pbinom(y, n, pr, /*lower_tail*/TRUE, /*log_p*/FALSE); /* fuzz to ensure left continuity: */ p *= 1 - 64*DBL_EPSILON; /*-- Fixme, here y can be way off -- should use interval search instead of primitive stepping down or up */ #ifdef maybe_future if((lower_tail && z >= p) || (!lower_tail && z <= p)) { #else if(z >= p) { #endif /* search to the left */ #ifdef DEBUG_qbinom REprintf("\tnew z=%7g >= p = %7g --> search to left (y--) ..\n", z,p); #endif for(;;) { if(y == 0 || (z = pbinom(y - 1, n, pr, /*l._t.*/TRUE, /*log_p*/FALSE)) < p) return y; y = y - 1; } } else { /* search to the right */ #ifdef DEBUG_qbinom REprintf("\tnew z=%7g < p = %7g --> search to right (y++) ..\n", z,p); #endif for(;;) { y = y + 1; if(y == n || (z = pbinom(y, n, pr, /*l._t.*/TRUE, /*log_p*/FALSE)) >= p) return y; } } }