static void write_srsieve_file(const char *file_name, uint64_t p)
{
FILE *file;
uint32_t seq, count;
if ((file = xfopen(file_name, "w", warning)) == NULL)
return;
fprintf(file, "pmin=%"PRIu64"\n", p);
for (count = 0, seq = 0; seq < seq_count; seq++)
{
fprintf(file, "%s\n", seq_str(seq));
count += seq_for_each_term(seq,(kcn_app_t)write_n,file);
}
report_wrote(count, seq_count, "srsieve", file_name);
xfclose(file,file_name);
}
void ClientComm::SendQuery(std::vector<std::string> descrip, char* seq, int length) {
assert(started_ == true);
assert(ended_ == false);
std::string seq_str(seq, length);
client_socket_->Send(descrip[QUERY_NAME_FIELD]);
client_socket_->Send(" ");
client_socket_->Send(seq_str);
client_socket_->Send(" ");
client_socket_->Send(descrip[REF_NAME_FIELD]);
client_socket_->Send(" ");
client_socket_->Send(descrip[REF_START_FIELD]);
client_socket_->Send(" ");
client_socket->_Send(descrip[REF_END_FIELD]);
client_socket->_Send(" ");
client_socket->_Send(descrip[THRESHOLD_FIELD]);
client_socket->_Send("\n");
}
static void write_newpgen_files(uint64_t p)
{
FILE *file;
char file_name[FILENAME_MAX+1];
int t;
uint32_t i, count, total;
for (total = 0, i = 0; i < seq_count; i++)
{
assert(ABS(SEQ[i].c) == 1 || SEQ[i].k == 1);
t = npg_format_index(SEQ[i].c);
if (t == 0 || t == 1)
snprintf(file_name, FILENAME_MAX, "t%d_b%" PRIu32 "_k%" PRIu64 ".%s",
npg_formats[t].sieve_type, base, SEQ[i].k, NEWPGEN_EXT);
else
snprintf(file_name, FILENAME_MAX, "t%d_b%" PRIu32 "_k%" PRIu64 ".%s",
npg_formats[t].sieve_type, base, ABS(SEQ[i].c), NEWPGEN_EXT);
file_name[FILENAME_MAX] = '\0';
if ((file = xfopen(file_name, "w", warning)) == NULL)
continue;
fprintf(file, "%"PRIu64":%c:1:%"PRIu32":%d\n",
p, npg_formats[t].mode_char, base, npg_formats[t].mode_bits);
count = seq_for_each_term(i,npg_formats[t].write_fun,file);
if (seq_count == 1 || verbose > 1)
report("Wrote %"PRIu32" term%s for sequence %s to NewPGen format file"
" `%s'.", count, plural(count), seq_str(i), file_name);
xfclose(file,file_name);
total += count;
}
if (seq_count > 1 && verbose == 1) /* don't report twice */
report("Wrote %"PRIu32" term%s for %"PRIu32" sequence%s to NewPGen format"
" files t*_b%"PRIu32"_k*.%s.", total, plural(total),
seq_count, plural(seq_count), base, NEWPGEN_EXT);
}
