void DataRange::loadWidgetDefaults() {
setRange(dialogDefaults().value("vector/range", 1).toInt());
setStart(dialogDefaults().value("vector/start", 0).toInt());
setCountFromEnd(dialogDefaults().value("vector/countFromEnd",false).toBool());
setReadToEnd(dialogDefaults().value("vector/readToEnd",true).toBool());
setSkip(dialogDefaults().value("vector/skip", 0).toInt());
setDoSkip(dialogDefaults().value("vector/doSkip", false).toBool());
setDoFilter(dialogDefaults().value("vector/doAve",false).toBool());
setRangeUnits(dialogDefaults().value("vector/rangeUnits",tr("frames")).toString());
setStartUnits(dialogDefaults().value("vector/startUnits",tr("frames")).toString());
}
// Calculate skip for the suffix array
int calcSkip(ESA esa)
{
int size = esa->size;
int *latest = malloc(sizeof(*latest) * (MAXPSSMSIZE+1));
if(latest == NULL)
{
setError("Couldn't allocate temporary memory for skip calculation.");
return 0;
}
int i, j, minS, curLcp;
// latest points to a table of where we last encountered the various possible
// lcp values - we start by initializing it to -1 (means we never encountered
// any of the lcp's)
for(i = 0; i < MAXPSSMSIZE+1; i++)
latest[i] = -1;
// Last suffix has skip = size
curLcp = getLcp(esa, size-1);
latest[curLcp] = size-1;
setSkip(esa, size-1,size);
// Start from the second-last row and calculate skip's upwards
for(i = size - 2; i >= 0; i--){
// Get lcp for this row
curLcp = getLcp(esa, i);
// Register it in table
latest[curLcp] = i;
// Find the row with the lowest index that is greater than ours and that has a
// strictly lower lcp
minS = -1;
for(j = curLcp - 1; j >= 0; j--){
if(minS == -1) {
minS = latest[j];
}
else {
break;
}
}
// then the smallest skip value is found
for(; j >= 0; j--) {
if(minS > latest[j]&&(latest[j]> -1)){
minS = latest[j];
}
}
// If a value was found this value is registrered
if(minS != -1) {
setSkip(esa, i, minS);
}
// Else skip is set to the size of the text
else {
setSkip(esa, i, size);
}
}
free(latest);
return 1;
}