/*
* Constructs a CQGlobalQuantitiesWidget which is a child of 'parent', with the
* name 'name'.'
*/
CQGlobalQuantitiesWidget::CQGlobalQuantitiesWidget(QWidget* parent, const char* name)
: CopasiWidget(parent, name)
{
setupUi(this);
//Create Source Data Model.
mpGlobalQuantityDM = new CQGlobalQuantityDM(this);
//Create the Proxy Model for sorting/filtering and set its properties.
mpProxyModel = new CQSortFilterProxyModel();
mpProxyModel->setSortCaseSensitivity(Qt::CaseInsensitive);
mpProxyModel->setFilterKeyColumn(-1);
//Setting values for Types comboBox
mpTypeDelegate = new CQIndexComboDelegate(this, mpGlobalQuantityDM->getTypes());
mpTblGlobalQuantities->setItemDelegateForColumn(COL_TYPE_GQ, mpTypeDelegate);
mpTblGlobalQuantities->verticalHeader()->setResizeMode(QHeaderView::ResizeToContents);
mpTblGlobalQuantities->verticalHeader()->hide();
mpTblGlobalQuantities->sortByColumn(COL_ROW_NUMBER, Qt::AscendingOrder);
// Connect the table widget
connect(mpGlobalQuantityDM, SIGNAL(notifyGUI(ListViews::ObjectType, ListViews::Action, const std::string)),
this, SLOT(protectedNotify(ListViews::ObjectType, ListViews::Action, const std::string)));
connect(mpGlobalQuantityDM, SIGNAL(dataChanged(const QModelIndex&, const QModelIndex&)),
this, SLOT(dataChanged(const QModelIndex&, const QModelIndex&)));
connect(mpLEFilter, SIGNAL(textChanged(const QString &)),
this, SLOT(slotFilterChanged()));
CopasiUI3Window * pWindow = dynamic_cast<CopasiUI3Window * >(parent->parent());
mpGlobalQuantityDM->setUndoStack(pWindow->getUndoStack());
}
/*
* Constructs a CQEventWidget1 which is a child of 'parent', with the
* name 'name'.'
*/
CQEventWidget1::CQEventWidget1(QWidget * parent, const char * name):
CopasiWidget(parent, name),
mKeyToCopy("")
{
setupUi(this);
init();
#ifdef COPASI_UNDO
CopasiUI3Window * pWindow = dynamic_cast<CopasiUI3Window * >(parent->parent());
setUndoStack(pWindow->getUndoStack());
#endif
}
void CQTabWidget::load()
{
if (mpObject != NULL)
{
mpEditName->setText(FROM_UTF8(mpObject->getObjectName()));
if (mObjectType == ListViews::ObjectType::FUNCTION)
{
bool readOnly = static_cast< const CFunction * >(mpObject)->isReadOnly();
mpEditName->setReadOnly(readOnly);
mpBtnCommit->setEnabled(!readOnly);
mpBtnRevert->setEnabled(!readOnly);
mpBtnDelete->setEnabled(!readOnly);
}
else if (mObjectType == ListViews::ObjectType::UNIT)
{
bool readOnly = static_cast< const CUnitDefinition * >(mpObject)->isReadOnly();
mpEditName->setReadOnly(readOnly);
mpBtnCommit->setEnabled(!readOnly);
mpBtnRevert->setEnabled(!readOnly);
mpBtnDelete->setEnabled(!readOnly);
}
#ifdef COPASI_Provenance
if (mObjectType == ListViews::ObjectType::METABOLITE ||
mObjectType == ListViews::ObjectType::COMPARTMENT ||
mObjectType == ListViews::ObjectType::REACTION ||
mObjectType == ListViews::ObjectType::EVENT ||
mObjectType == ListViews::ObjectType::MODELVALUE)
{
CopasiUI3Window * pWindow = dynamic_cast<CopasiUI3Window *>(CopasiUI3Window::getMainWindow());
if (pWindow) //Probably could just assume the Main Window exists
{
QList<QString> VersioningPath = pWindow->getVersionHierarchy()->getVersionsPathToCurrentModel();
mpEntityProvenanceDialog->load(mpUndoStack, FROM_UTF8(mpObject->getObjectName()), FROM_UTF8(CRootContainer::getConfiguration()->getWorkingDirectory()), VersioningPath);
}
}
#endif
}
else
{
mpEditName->setText("");
}
}
bool TaskWidget::commonAfterRunTask()
{
if (!mpTask) return false;
if (CRootContainer::getConfiguration()->displayPopulations())
{
if (dynamic_cast<COptTask*>(mpTask) != NULL || dynamic_cast<CFitTask*>(mpTask) != NULL)
{
CopasiUI3Window* pWindow = CopasiUI3Window::getMainWindow();
CQOptPopulation* pPopWidget = pWindow->getPopulationDisplay();
COptPopulationMethod* pMethod = dynamic_cast<COptPopulationMethod*>(mpTask->getMethod());
pPopWidget->setMethod(NULL);
if (pMethod != NULL)
{
mpDataModel->removeInterface(pPopWidget);
}
}
}
if (mProgressBar != NULL)
{
mProgressBar->finish();
mProgressBar->deleteLater();
mProgressBar = NULL;
}
mpTask->setCallBack(NULL);
CCopasiMessage::clearDeque();
assert(mpDataModel != NULL);
mpDataModel->finish();
CMathContainer * pContainer = mpTask->getMathContainer();
protectedNotify(ListViews::ObjectType::STATE, ListViews::CHANGE, pContainer->getModel().getKey());
unsetCursor();
CopasiUI3Window::getMainWindow()->suspendAutoSave(false);
return loadTask();
}
/*
* Constructs a CQSpeciesDetail which is a child of 'parent', with the
* name 'name'.'
*/
CQSpeciesDetail::CQSpeciesDetail(QWidget* parent, const char* name) :
CopasiWidget(parent, name),
mChanged(false),
mpMetab(NULL),
mpCurrentCompartment(NULL),
mItemToType(),
mInitialNumber(0.0),
mInitialConcentration(0.0),
mExpressionValid(false),
mInitialExpressionValid(false)
{
setupUi(this);
mpComboBoxType->insertItem(mpComboBoxType->count(), FROM_UTF8(CModelEntity::StatusName[CModelEntity::REACTIONS]));
mpComboBoxType->insertItem(mpComboBoxType->count(), FROM_UTF8(CModelEntity::StatusName[CModelEntity::FIXED]));
mpComboBoxType->insertItem(mpComboBoxType->count(), FROM_UTF8(CModelEntity::StatusName[CModelEntity::ASSIGNMENT]));
mpComboBoxType->insertItem(mpComboBoxType->count(), FROM_UTF8(CModelEntity::StatusName[CModelEntity::ODE]));
mItemToType.push_back(CModelEntity::REACTIONS);
mItemToType.push_back(CModelEntity::FIXED);
mItemToType.push_back(CModelEntity::ASSIGNMENT);
mItemToType.push_back(CModelEntity::ODE);
// assert(CCopasiRootContainer::getDatamodelList()->size() > 0);
// int Width = fontMetrics().width("Concentration (" +
// FROM_UTF8(CCopasiRootContainer::getDatamodelList()->operator[](0).getModel()->getConcentrationUnitsDisplayString()) +
// ")");
//
// mpLblValue->setMinimumWidth(Width);
mpExpressionEMW->mpExpressionWidget->setExpressionType(CQExpressionWidget::TransientExpression);
mpInitialExpressionEMW->mpExpressionWidget->setExpressionType(CQExpressionWidget::InitialExpression);
mpReactionTable->verticalHeader()->hide();
mpReactionTable->verticalHeader()->setResizeMode(QHeaderView::ResizeToContents);
mpReactionTable->horizontalHeader()->hide();
mpReactionTable->horizontalHeader()->setResizeMode(QHeaderView::ResizeToContents);
CopasiUI3Window * pWindow = dynamic_cast<CopasiUI3Window * >(parent->parent());
setUndoStack(pWindow->getUndoStack());
}
/*
* Constructs a CQCompartment which is a child of 'parent', with the
* name 'name'.'
*/
CQCompartment::CQCompartment(QWidget* parent, const char* name):
CopasiWidget(parent, name),
mItemToType(),
mpCompartment(NULL),
mChanged(false),
mExpressionValid(true),
mInitialExpressionValid(true)
{
setupUi(this);
mpComboBoxType->insertItem(mpComboBoxType->count(), FROM_UTF8(CModelEntity::StatusName[CModelEntity::FIXED]));
mpComboBoxType->insertItem(mpComboBoxType->count(), FROM_UTF8(CModelEntity::StatusName[CModelEntity::ASSIGNMENT]));
mpComboBoxType->insertItem(mpComboBoxType->count(), FROM_UTF8(CModelEntity::StatusName[CModelEntity::ODE]));
mItemToType.push_back(CModelEntity::FIXED);
mItemToType.push_back(CModelEntity::ASSIGNMENT);
mItemToType.push_back(CModelEntity::ODE);
mpMetaboliteTable->horizontalHeader()->hide();
mExpressionValid = false;
mpExpressionEMW->mpExpressionWidget->setExpressionType(CQExpressionWidget::TransientExpression);
mInitialExpressionValid = false;
mpInitialExpressionEMW->mpExpressionWidget->setExpressionType(CQExpressionWidget::InitialExpression);
#ifdef COPASI_EXTUNIT
mpLblDim->show();
mpComboBoxDim->show();
#else
mpLblDim->hide();
mpComboBoxDim->hide();
#endif
#ifdef COPASI_UNDO
CopasiUI3Window * pWindow = dynamic_cast<CopasiUI3Window * >(parent->parent());
setUndoStack(pWindow->getUndoStack());
#endif
}
void WizardDialog::textBrowser_anchorClicked(const QUrl & url)
{
QString name = url.fragment();
// std::cout << name.toUtf8().data() << std::endl;
CopasiUI3Window * pMainWindow = dynamic_cast<CopasiUI3Window *>(copasiMainWindow);
if (name == "Model Settings")
{
if (pMainWindow)
pMainWindow->getMainWidget()->switchToOtherWidget(ListViews::WidgetType::Model, std::string());
}
else if (name == "Reaction Overview")
{
if (pMainWindow)
pMainWindow->getMainWidget()->switchToOtherWidget(ListViews::WidgetType::Reactions, std::string());
}
else if (name == "Report Definition")
{
if (pMainWindow)
pMainWindow->getMainWidget()->switchToOtherWidget(ListViews::WidgetType::ReportTemplates, std::string());
}
else if (name == "Step 1")
{
buttonGroup->button(0)->setChecked(true);
buttonGroup2_clicked(this->buttonGroup->checkedId());
}
else if (name == "Time Course")
{
if (pMainWindow)
pMainWindow->getMainWidget()->switchToOtherWidget(ListViews::WidgetType::TimeCourse, std::string());
}
else if (name == "Plot Definition Overview")
{
if (pMainWindow)
pMainWindow->getMainWidget()->switchToOtherWidget(ListViews::WidgetType::Plots, std::string());
}
else
{
CQMessageBox::information(this, "Error", "Link not found",
QMessageBox::Ok, QMessageBox::Ok);
}
}
bool TaskWidget::commonBeforeRunTask()
{
// save the state of the widget
if (!saveTask())
{
CQMessageBox::critical(this, "Simulation Error",
CCopasiMessage::getAllMessageText().c_str(),
QMessageBox::Ok | QMessageBox::Default, QMessageBox::NoButton);
return false;
}
if (!mpTask) return false;
if (mProgressBar != NULL)
{
//CQMessageBox::critical(this, "Task in Progress",
// "A task is currently running, another cannot be started before the current task ended.",
// QMessageBox::Ok | QMessageBox::Default, QMessageBox::NoButton);
return false;
}
// if overwrite is enabled and the file exists, then ask
if (!mpTask->getReport().getTarget().empty() &&
mpTask->getReport().confirmOverwrite())
{
// The target might be a relative path
std::string Target = mpTask->getReport().getTarget();
if (CDirEntry::isRelativePath(Target) &&
!CDirEntry::makePathAbsolute(Target, mpDataModel->getReferenceDirectory()))
Target = CDirEntry::fileName(Target);
if (CDirEntry::exist(Target) &&
QMessageBox::question(this,
QString("Confirm Overwrite"),
QString("The report file already exists. Would you like to overwrite it? \n\n(You can disable this dialog by clicking the 'Report' button.)"),
QMessageBox::Yes, QMessageBox::No) == QMessageBox::No)
return false;
}
//set mouse cursor
setCursor(Qt::WaitCursor);
//handle autosave feature
CopasiUI3Window::getMainWindow()->autoSave();
CopasiUI3Window::getMainWindow()->suspendAutoSave(true);
//create progress bar
mProgressBar = CProgressBar::create();
mpTask->setCallBack(mProgressBar);
CCopasiMessage::clearDeque();
// create population display if needed
if (CRootContainer::getConfiguration()->displayPopulations())
{
if (dynamic_cast<COptTask*>(mpTask) != NULL || dynamic_cast<CFitTask*>(mpTask) != NULL)
{
CopasiUI3Window* pWindow = CopasiUI3Window::getMainWindow();
CQOptPopulation* pPopWidget = pWindow->getPopulationDisplay();
COptPopulationMethod* pMethod = dynamic_cast<COptPopulationMethod*>(mpTask->getMethod());
pPopWidget->setMethod(pMethod);
if (pMethod != NULL)
{
pPopWidget->addToMainWindow(pWindow);
pPopWidget->show();
mpDataModel->addInterface(pPopWidget);
}
}
}
return true;
}