コード例 #1
0
ファイル: Exec_DataSetCmd.cpp プロジェクト: Amber-MD/cpptraj
// Exec_DataSetCmd::Remove()
Exec::RetType Exec_DataSetCmd::Remove(CpptrajState& State, ArgList& argIn) {
  std::string status;
  // Get criterion type
  CriterionType criterion = UNKNOWN_C;
  for (int i = 1; i < (int)N_C; i++)
    if (argIn.hasKey( CriterionKeys[i] )) {
      criterion = (CriterionType)i;
      status.assign( CriterionKeys[i] );
      break;
    }
  if (criterion == UNKNOWN_C) {
    mprinterr("Error: No criterion specified for 'remove'.\n");
    return CpptrajState::ERR;
  }
  // Get select type
  SelectType select = UNKNOWN_S;
  std::string val1, val2;
  for (const SelectPairType* ptr = SelectKeys; ptr->key_ != 0; ptr++)
    if (argIn.Contains( ptr->key_ )) {
      select = ptr->type_;
      val1 = argIn.GetStringKey( ptr->key_ );
      status.append( " " + std::string(ptr->key_) + " " + val1 );
      // Get 'and' value for between/outside. TODO put nargs in SelectPairType?
      if (select == BETWEEN || select == OUTSIDE) {
        val2 = argIn.GetStringKey("and");
        if (val2.empty()) {
          mprinterr("Error: Missing 'and' value for selection '%s'\n", ptr->key_);
          return CpptrajState::ERR;
        }
        status.append(" and " + val2);
      }
      break;
    }
  if (select == UNKNOWN_S || val1.empty()) {
    mprinterr("Error: No selection specified for 'remove'.\n");
    return CpptrajState::ERR;
  }
  if ( (criterion == SMODE || criterion == STYPE) &&
       (select != EQUAL && select != NOT_EQUAL) )
  {
    mprinterr("Error: Specified select not valid for criterion '%s'\n", CriterionKeys[criterion]);
    return CpptrajState::ERR;
  }
  mprintf("\tRemoving data sets");
  std::string setSelectArg = argIn.GetStringNext();
  if (setSelectArg.empty())
    setSelectArg.assign("*");
  else
    mprintf(" within selection '%s'", setSelectArg.c_str());
  mprintf(" %s\n", status.c_str());
  DataSetList tempDSL = State.DSL().GetMultipleSets( setSelectArg );
  if (tempDSL.empty()) {
    mprinterr("Error: No data sets selected.\n");
    return CpptrajState::ERR;
  }
  // Remove sets
  unsigned int Nremoved = 0;
  if ( criterion == AVERAGE ) {
    if (!validDouble( val1 )) {
      mprinterr("Error: '%s' is not a valid number\n", val1.c_str());
      return CpptrajState::ERR;
    }
    double d_val1 = convertToDouble( val1 );
    double d_val2  = d_val1;
    if (!val2.empty()) {
      if (!validDouble( val2 )) {
        mprinterr("Error: '%s' is not a valid number\n", val2.c_str());
        return CpptrajState::ERR;
      }
      d_val2 = convertToDouble( val2 );
    }
    for (DataSetList::const_iterator ds = tempDSL.begin(); ds != tempDSL.end(); ++ds)
    {
      if ( (*ds)->Group() != DataSet::SCALAR_1D )
        mprintf("Warning: '%s' is not a valid data set for 'average' criterion.\n", (*ds)->legend());
      else {
        DataSet_1D const& ds1 = static_cast<DataSet_1D const&>( *(*ds) );
        double avg = ds1.Avg();
        bool remove = false;
        switch (select) {
          case EQUAL        : remove = (avg == d_val1); break;
          case NOT_EQUAL    : remove = (avg != d_val1); break;
          case LESS_THAN    : remove = (avg < d_val1); break;
          case GREATER_THAN : remove = (avg > d_val1); break;
          case BETWEEN      : remove = (avg > d_val1 && avg < d_val2); break;
          case OUTSIDE      : remove = (avg < d_val1 || avg > d_val2); break;
          case UNKNOWN_S:
          case N_S      : return CpptrajState::ERR; // Sanity check
        }
        if (remove) {
          mprintf("\t  Removing set '%s' (avg is %g)\n", (*ds)->legend(), avg);
          State.RemoveDataSet( *ds );
          ++Nremoved;
        }
      }
    }
  } else if ( criterion == SIZE ) {
    if (!validInteger( val1 )) {
      mprinterr("Error: '%s' is not a valid number\n", val1.c_str());
      return CpptrajState::ERR;
    }
    unsigned int i_val1 = (unsigned int)convertToInteger( val1 );
    unsigned int i_val2 = i_val1;
    if (!val2.empty()) {
      if (!validInteger( val2 )) {
        mprinterr("Error: '%s' is not a valid number\n", val2.c_str());
        return CpptrajState::ERR;
      }
      i_val2 = convertToInteger( val2 );
    }
    for (DataSetList::const_iterator ds = tempDSL.begin(); ds != tempDSL.end(); ++ds)
    {
      unsigned int size = (*ds)->Size();
      bool remove = false;
      switch ( select ) {
        case EQUAL        : remove = (size == i_val1); break;
        case NOT_EQUAL    : remove = (size != i_val1); break;
        case LESS_THAN    : remove = (size < i_val1); break;
        case GREATER_THAN : remove = (size > i_val1); break;
        case BETWEEN      : remove = (size > i_val1 && size < i_val2); break;
        case OUTSIDE      : remove = (size < i_val1 || size > i_val2); break;
        case UNKNOWN_S:
        case N_S      : return CpptrajState::ERR; // Sanity check
      }
      if (remove) {
        mprintf("\t  Removing set '%s' (size is %u)\n", (*ds)->legend(), size);
        State.RemoveDataSet( *ds );
        ++Nremoved;
      }
    }
  } else if ( criterion == SMODE ) {
    MetaData::scalarMode mode_val = MetaData::ModeFromKeyword( val1 );
    if (mode_val == MetaData::UNKNOWN_MODE) {
      mprinterr("Error: '%s' is not a valid mode.\n", val1.c_str());
      return CpptrajState::ERR;
    }
    for (DataSetList::const_iterator ds = tempDSL.begin(); ds != tempDSL.end(); ++ds)
    {
      bool remove = false;
      MetaData::scalarMode mode = (*ds)->Meta().ScalarMode();
      if      (select == EQUAL    ) remove = ( mode == mode_val );
      else if (select == NOT_EQUAL) remove = ( mode != mode_val );
      else return CpptrajState::ERR; // Sanity check
      if (remove) {
        mprintf("\t  Removing set '%s' (mode is '%s')\n", (*ds)->legend(), MetaData::ModeString(mode));
        State.RemoveDataSet( *ds );
        ++Nremoved;
      }
    }
  } else if ( criterion == STYPE ) {
    MetaData::scalarType type_val = MetaData::TypeFromKeyword( val1, MetaData::UNKNOWN_MODE );
    if (type_val == MetaData::UNDEFINED) {
      mprinterr("Error: '%s' is not a valid type.\n", val1.c_str());
      return CpptrajState::ERR;
    }
    for (DataSetList::const_iterator ds = tempDSL.begin(); ds != tempDSL.end(); ++ds)
    {
      bool remove = false;
      MetaData::scalarType type = (*ds)->Meta().ScalarType();
      if      (select == EQUAL    ) remove = ( type == type_val );
      else if (select == NOT_EQUAL) remove = ( type != type_val );
      else return CpptrajState::ERR; // Sanity check
      if (remove) {
        mprintf("\t  Removing set '%s' (typeis '%s')\n", (*ds)->legend(), MetaData::TypeString(type));
        State.RemoveDataSet( *ds );
        ++Nremoved;
      }
    }
  } else {
    mprinterr("Internal Error: Criterion not yet implemented.\n");
    return CpptrajState::ERR;
  }
  mprintf("\tRemoved %u of %zu sets.\n", Nremoved, tempDSL.size());
  return CpptrajState::OK;
}