int DipoleFit::fit_dipoles( const QString& dataname, MneMeasData* data, DipoleFitData* fit, GuessData* guess, float tmin, float tmax, float tstep, float integ, int verbose, ECDSet& p_set)
{
float *one = MALLOC(data->nchan,float);
float time;
ECDSet set;
ECD dip;
int s;
int report_interval = 10;
set.dataname = dataname;
fprintf(stderr,"Fitting...%c",verbose ? '\n' : '\0');
for (s = 0, time = tmin; time < tmax; s++, time = tmin + s*tstep) {
/*
* Pick the data point
*/
if (mne_get_values_from_data(time,integ,data->current->data,data->current->np,data->nchan,data->current->tmin,
1.0/data->current->tstep,FALSE,one) == FAIL) {
fprintf(stderr,"Cannot pick time: %7.1f ms\n",1000*time);
continue;
}
if (!DipoleFitData::fit_one(fit,guess,time,one,verbose,dip))
printf("t = %7.1f ms : %s\n",1000*time,"error (tbd: catch)");
else {
set.addEcd(dip);
if (verbose)
dip.print(stdout);
else {
if (set.size() % report_interval == 0)
fprintf(stderr,"%d..",set.size());
}
}
}
if (!verbose)
fprintf(stderr,"[done]\n");
FREE(one);
p_set = set;
return OK;
}
int DipoleFit::fit_dipoles_raw(const QString& dataname, MneRawData* raw, mneChSelection sel, DipoleFitData* fit, GuessData* guess, float tmin, float tmax, float tstep, float integ, int verbose, ECDSet& p_set)
{
float *one = MALLOC(sel->nchan,float);
float sfreq = raw->info->sfreq;
float myinteg = integ > 0.0 ? 2*integ : 0.1;
int overlap = ceil(myinteg*sfreq);
int length = SEG_LEN*sfreq;
int step = length - overlap;
int stepo = step + overlap/2;
int start = raw->first_samp;
int s,picks;
float time,stime;
float **data = ALLOC_CMATRIX(sel->nchan,length);
ECD dip;
ECDSet set;
int report_interval = 10;
set.dataname = dataname;
/*
* Load the initial data segment
*/
stime = start/sfreq;
if (MneRawData::mne_raw_pick_data_filt(raw,sel,start,length,data) == FAIL)
goto bad;
fprintf(stderr,"Fitting...%c",verbose ? '\n' : '\0');
for (s = 0, time = tmin; time < tmax; s++, time = tmin + s*tstep) {
picks = time*sfreq - start;
if (picks > stepo) { /* Need a new data segment? */
start = start + step;
if (MneRawData::mne_raw_pick_data_filt(raw,sel,start,length,data) == FAIL)
goto bad;
picks = time*sfreq - start;
stime = start/sfreq;
}
/*
* Get the values
*/
if (mne_get_values_from_data_ch (time,integ,data,length,sel->nchan,stime,sfreq,FALSE,one) == FAIL) {
fprintf(stderr,"Cannot pick time: %8.3f s\n",time);
continue;
}
/*
* Fit
*/
if (!DipoleFitData::fit_one(fit,guess,time,one,verbose,dip))
qWarning() << "Error";
else {
set.addEcd(dip);
if (verbose)
dip.print(stdout);
else {
if (set.size() % report_interval == 0)
fprintf(stderr,"%d..",set.size());
}
}
}
if (!verbose)
fprintf(stderr,"[done]\n");
FREE_CMATRIX(data);
FREE(one);
p_set = set;
return OK;
bad : {
FREE_CMATRIX(data);
FREE(one);
return FAIL;
}
}