コード例 #1
0
bool Thyra::test_single_belos_thyra_solver(
  const std::string                       matrixFile
  ,const bool                             testTranspose
  ,const bool                             usePreconditioner
  ,const int                              numRhs
  ,const int                              numRandomVectors
  ,const double                           maxFwdError
  ,const double                           maxResid
  ,const double                           maxSolutionError
  ,const bool                             showAllTests
  ,const bool                             dumpAll
  ,Teuchos::ParameterList                 *belosLOWSFPL
  ,Teuchos::ParameterList                 *precPL
  ,Teuchos::FancyOStream                  *out_arg
  )
{
  using Teuchos::rcp;
  using Teuchos::OSTab;
  bool result, success = true;

  Teuchos::RCP<Teuchos::FancyOStream> out = Teuchos::rcp(out_arg,false);

  try {

#ifndef SUN_CXX

    if(out.get()) {
      *out << "\n***"
           << "\n*** Testing Thyra::BelosLinearOpWithSolveFactory (and Thyra::BelosLinearOpWithSolve)"
           << "\n***\n"
           << "\nEchoing input options:"
           << "\n  matrixFile             = " << matrixFile
           << "\n  testTranspose          = " << testTranspose
           << "\n  usePreconditioner      = " << usePreconditioner
           << "\n  numRhs                 = " << numRhs
           << "\n  numRandomVectors       = " << numRandomVectors
           << "\n  maxFwdError            = " << maxFwdError
           << "\n  maxResid               = " << maxResid
           << "\n  showAllTests           = " << showAllTests
           << "\n  dumpAll                = " << dumpAll
           << std::endl;
    }

    if(out.get()) *out << "\nA) Reading in an epetra matrix A from the file \'"<<matrixFile<<"\' ...\n";
  
    Epetra_SerialComm comm;
    Teuchos::RCP<Epetra_CrsMatrix> epetra_A;
    EpetraExt::readEpetraLinearSystem( matrixFile, comm, &epetra_A );

    Teuchos::RCP<const LinearOpBase<double> > A = epetraLinearOp(epetra_A);

    if(out.get() && dumpAll) *out << "\ndescribe(A) =\n" << describe(*A,Teuchos::VERB_EXTREME);

    if(out.get()) *out << "\nB) Creating a BelosLinearOpWithSolveFactory object opFactory ...\n";

    Teuchos::RCP<LinearOpWithSolveFactoryBase<double> >
      lowsFactory;
    {
      Teuchos::RCP<BelosLinearOpWithSolveFactory<double> >
        belosLowsFactory = Teuchos::rcp(new BelosLinearOpWithSolveFactory<double>());
      lowsFactory = belosLowsFactory;
    }

    if(out.get()) {
      *out << "\nlowsFactory.getValidParameters() before setting preconditioner factory:\n";
      lowsFactory->getValidParameters()->print(OSTab(out).o(),0,true,false);
    }

    if(usePreconditioner) {
#ifdef HAVE_BELOS_IFPACK
      if(out.get()) {
        *out << "\nSetting an Ifpack preconditioner factory ...\n";
      }
      RCP<PreconditionerFactoryBase<double> >
        precFactory = Teuchos::rcp(new IfpackPreconditionerFactory());
      if (precPL)
        precFactory->setParameterList(rcp(precPL,false));
      lowsFactory->setPreconditionerFactory(precFactory,"Ifpack");
#else
      TEUCHOS_TEST_FOR_EXCEPT(usePreconditioner);
#endif
    }
    
    if(out.get()) {
      *out << "\nlowsFactory.getValidParameters() after setting preconditioner factory:\n";
      lowsFactory->getValidParameters()->print(OSTab(out).o(),0,true,false);
      *out << "\nbelosLOWSFPL before setting parameters:\n";
      belosLOWSFPL->print(OSTab(out).o(),0,true);
    }

    lowsFactory->setParameterList(Teuchos::rcp(belosLOWSFPL,false));

    if(out.get()) {
      *out << "\nbelosLOWSFPL after setting parameters:\n";
      belosLOWSFPL->print(OSTab(out).o(),0,true);
    }

    if(out.get()) *out << "\nC) Creating a BelosLinearOpWithSolve object nsA from A ...\n";

    Teuchos::RCP<LinearOpWithSolveBase<double> > nsA = lowsFactory->createOp();
    Thyra::initializeOp<double>(*lowsFactory,  A, nsA.ptr());

    if(out.get()) *out << "\nD) Testing the LinearOpBase interface of nsA ...\n";

    LinearOpTester<double> linearOpTester;
    linearOpTester.check_adjoint(testTranspose);
    linearOpTester.num_rhs(numRhs);
    linearOpTester.num_random_vectors(numRandomVectors);
    linearOpTester.set_all_error_tol(maxFwdError);
    linearOpTester.set_all_warning_tol(1e-2*maxFwdError);
    linearOpTester.show_all_tests(showAllTests);
    linearOpTester.dump_all(dumpAll);
    Thyra::seed_randomize<double>(0);
    result = linearOpTester.check(*nsA,Teuchos::Ptr<Teuchos::FancyOStream>(out.get()));
    if(!result) success = false;

    if(out.get()) *out << "\nE) Testing the LinearOpWithSolveBase interface of nsA ...\n";
    
    LinearOpWithSolveTester<double> linearOpWithSolveTester;
    linearOpWithSolveTester.num_rhs(numRhs);
    linearOpWithSolveTester.turn_off_all_tests();
    linearOpWithSolveTester.check_forward_default(true);
    linearOpWithSolveTester.check_forward_residual(true);
    if(testTranspose) {
      linearOpWithSolveTester.check_adjoint_default(true);
      linearOpWithSolveTester.check_adjoint_residual(true);
    }
    else {
      linearOpWithSolveTester.check_adjoint_default(false);
      linearOpWithSolveTester.check_adjoint_residual(false);
    }
    linearOpWithSolveTester.set_all_solve_tol(maxResid);
    linearOpWithSolveTester.set_all_slack_error_tol(maxResid);
    linearOpWithSolveTester.set_all_slack_warning_tol(1e+1*maxResid);
    linearOpWithSolveTester.forward_default_residual_error_tol(2*maxResid);
    linearOpWithSolveTester.forward_default_solution_error_error_tol(maxSolutionError);
    linearOpWithSolveTester.adjoint_default_residual_error_tol(2*maxResid);
    linearOpWithSolveTester.adjoint_default_solution_error_error_tol(maxSolutionError);
    linearOpWithSolveTester.show_all_tests(showAllTests);
    linearOpWithSolveTester.dump_all(dumpAll);
    Thyra::seed_randomize<double>(0);
    result = linearOpWithSolveTester.check(*nsA,out.get());
    if(!result) success = false;

    if(out.get()) {
      *out << "\nbelosLOWSFPL after solving:\n";
      belosLOWSFPL->print(OSTab(out).o(),0,true);
    }
    
#else // SUN_CXX
    
    if(out.get()) *out << "\nTest failed since is was not even compiled since SUN_CXX was defined!\n";
    success = false;

#endif // SUN_CXX

  }
  catch( const std::exception &excpt ) {
    if(out.get()) *out << std::flush;
    std::cerr << "*** Caught standard exception : " << excpt.what() << std::endl;
    success = false;
  }
   
  return success;
    
}
コード例 #2
0
bool Thyra::test_single_aztecoo_thyra_solver(
    const std::string                       matrixFile
    ,const bool                             testTranspose
    ,const int                              numRandomVectors
    ,const double                           maxFwdError
    ,const double                           maxResid
    ,const double                           maxSolutionError
    ,const bool                             showAllTests
    ,const bool                             dumpAll
    ,Teuchos::ParameterList                 *aztecooLOWSFPL
    ,Teuchos::FancyOStream                  *out_arg
)
{
    using Teuchos::rcp;
    using Teuchos::RCP;
    using Teuchos::OSTab;
    typedef Teuchos::ParameterList::PrintOptions PLPrintOptions;
    bool result, success = true;

    RCP<Teuchos::FancyOStream>
    out = Teuchos::rcp(out_arg,false);

    try {

#ifndef SUN_CXX

        if(out.get()) {
            *out
                    << "\n***"
                    << "\n*** Testing Thyra::AztecOOLinearOpWithSolveFactory (and Thyra::AztecOOLinearOpWithSolve)"
                    << "\n***\n"
                    << "\nEchoing input options:"
                    << "\n  matrixFile             = " << matrixFile
                    << "\n  testTranspose          = " << testTranspose
                    << "\n  numRandomVectors       = " << numRandomVectors
                    << "\n  maxFwdError            = " << maxFwdError
                    << "\n  maxResid               = " << maxResid
                    << "\n  showAllTests           = " << showAllTests
                    << "\n  dumpAll                = " << dumpAll
                    << std::endl;
        }

        const bool useAztecPrec = (
                                      aztecooLOWSFPL
                                      &&
                                      aztecooLOWSFPL->sublist("Forward Solve")
                                      .sublist("AztecOO Settings")
                                      .get("Aztec Preconditioner","none")!="none"
                                  );

        if(out.get()) {
            if(useAztecPrec)
                *out << "\nUsing aztec preconditioning so we will not test adjoint solves using internal preconditioning ...\n";
        }

        if(out.get()) *out << "\nA) Reading in an epetra matrix A from the file \'"<<matrixFile<<"\' ...\n";

#ifdef HAVE_MPI
        Epetra_MpiComm comm(MPI_COMM_WORLD);
#else
        Epetra_SerialComm comm;
#endif
        RCP<Epetra_CrsMatrix> epetra_A;
        EpetraExt::readEpetraLinearSystem( matrixFile, comm, &epetra_A );

        RCP<const LinearOpBase<double> > A = Thyra::epetraLinearOp(epetra_A);

        if(out.get() && dumpAll) *out << "\ndescribe(A) =\n" << describe(*A,Teuchos::VERB_EXTREME);

        if(out.get()) *out << "\nB) Creating a AztecOOLinearOpWithSolveFactory object opFactory ...\n";

        RCP<LinearOpWithSolveFactoryBase<double> >
        lowsFactory = Teuchos::rcp(new AztecOOLinearOpWithSolveFactory());
        if(out.get()) {
            *out << "\nlowsFactory.getValidParameters() initially:\n";
            lowsFactory->getValidParameters()->print(OSTab(out).o(),PLPrintOptions().showTypes(true).showDoc(true));
        }
        aztecooLOWSFPL->sublist("Forward Solve").set("Tolerance",maxResid);
        aztecooLOWSFPL->sublist("Adjoint Solve").set("Tolerance",maxResid);
        if(showAllTests) {
            aztecooLOWSFPL->set("Output Every RHS",bool(true));
        }
        if(out.get()) {
            *out << "\naztecooLOWSFPL before setting parameters:\n";
            aztecooLOWSFPL->print(OSTab(out).o(),0,true);
        }
        if(aztecooLOWSFPL) lowsFactory->setParameterList(Teuchos::rcp(aztecooLOWSFPL,false));

        if(out.get()) *out << "\nC) Creating a AztecOOLinearOpWithSolve object nsA from A ...\n";

        RCP<LinearOpWithSolveBase<double> >
        nsA = lowsFactory->createOp();

        Thyra::initializeOp<double>(*lowsFactory, A, nsA.ptr());

        if(out.get()) *out << "\nD) Testing the LinearOpBase interface of nsA ...\n";

        LinearOpTester<double> linearOpTester;
        linearOpTester.check_adjoint(testTranspose);
        linearOpTester.num_random_vectors(numRandomVectors);
        linearOpTester.set_all_error_tol(maxFwdError);
        linearOpTester.set_all_warning_tol(1e-2*maxFwdError);
        linearOpTester.show_all_tests(showAllTests);
        linearOpTester.dump_all(dumpAll);
        Thyra::seed_randomize<double>(0);
        result = linearOpTester.check(*nsA,out());
        if(!result) success = false;

        if(out.get()) *out << "\nE) Testing the LinearOpWithSolveBase interface of nsA ...\n";

        LinearOpWithSolveTester<double> linearOpWithSolveTester;
        linearOpWithSolveTester.turn_off_all_tests();
        linearOpWithSolveTester.check_forward_default(true);
        linearOpWithSolveTester.check_forward_residual(true);
        if(testTranspose && useAztecPrec) {
            linearOpWithSolveTester.check_adjoint_default(true);
            linearOpWithSolveTester.check_adjoint_residual(true);
        }
        else {
            linearOpWithSolveTester.check_adjoint_default(false);
            linearOpWithSolveTester.check_adjoint_residual(false);
        }
        linearOpWithSolveTester.set_all_solve_tol(maxResid);
        linearOpWithSolveTester.set_all_slack_error_tol(maxResid);
        linearOpWithSolveTester.set_all_slack_warning_tol(10.0*maxResid);
        linearOpWithSolveTester.forward_default_residual_error_tol(2.5*maxResid);
        linearOpWithSolveTester.forward_default_solution_error_error_tol(maxSolutionError);
        linearOpWithSolveTester.adjoint_default_residual_error_tol(2.5*maxResid);
        linearOpWithSolveTester.adjoint_default_solution_error_error_tol(maxSolutionError);
        linearOpWithSolveTester.show_all_tests(showAllTests);
        linearOpWithSolveTester.dump_all(dumpAll);
        Thyra::seed_randomize<double>(0);
        result = linearOpWithSolveTester.check(*nsA,out.get());
        if(!result) success = false;

        if(out.get()) *out << "\nF) Uninitialize nsA, create preconditioner for diagonal scaled by 0.99 and then reinitialize nsA reusing the old preconditioner ...\n";

        // Scale the diagonal of the matrix and then create the preconditioner for it
        Thyra::uninitializeOp<double>(*lowsFactory, nsA.ptr());
        // Above is not required but a good idea since we are changing the matrix
        {
            Epetra_Vector diag(epetra_A->RowMap());
            epetra_A->ExtractDiagonalCopy(diag);
            diag.Scale(0.5);
            epetra_A->ReplaceDiagonalValues(diag);
        }
        Thyra::initializeOp<double>(*lowsFactory, A, nsA.ptr());

        // Scale the matrix back again and then reuse the preconditioner
        Thyra::uninitializeOp<double>(*lowsFactory, nsA.ptr());
        // Above is not required but a good idea since we are changing the matrix
        {
            Epetra_Vector diag(epetra_A->RowMap());
            epetra_A->ExtractDiagonalCopy(diag);
            diag.Scale(1.0/0.5);
            epetra_A->ReplaceDiagonalValues(diag);
        }
        initializeAndReuseOp<double>(*lowsFactory, A, nsA.ptr());

        if(out.get()) *out << "\nG) Testing the LinearOpWithSolveBase interface of nsA ...\n";

        Thyra::seed_randomize<double>(0);
        result = linearOpWithSolveTester.check(*nsA,out.get());
        if(!result) success = false;

        if(useAztecPrec) {

            if(out.get()) *out << "\nH) Reinitialize (A,A,PRECONDITIONER_INPUT_TYPE_AS_MATRIX) => nsA ...\n";

            initializeApproxPreconditionedOp<double>(*lowsFactory, A, A, nsA.ptr());

            if(out.get()) *out << "\nI) Testing the LinearOpWithSolveBase interface of nsA ...\n";

            Thyra::seed_randomize<double>(0);
            result = linearOpWithSolveTester.check(*nsA,out.get());
            if(!result) success = false;

            if(testTranspose && useAztecPrec) {
                linearOpWithSolveTester.check_adjoint_default(true);
                linearOpWithSolveTester.check_adjoint_residual(true);
            }
            else {
                linearOpWithSolveTester.check_adjoint_default(false);
                linearOpWithSolveTester.check_adjoint_residual(false);
            }

        }
        else {

            if(out.get()) *out << "\nSkipping testing steps H and I since we are not using aztec preconditioning and therefore will not test with an external preconditioner matrix!\n";

        }


        RCP<PreconditionerFactoryBase<double> >
        precFactory;

#ifdef HAVE_AZTECOO_IFPACK

        if(useAztecPrec) {

            if(testTranspose) {
                linearOpWithSolveTester.check_adjoint_default(true);
                linearOpWithSolveTester.check_adjoint_residual(true);
            }

            if(out.get()) *out << "\nJ) Create an ifpack preconditioner precA for A ...\n";

            precFactory = Teuchos::rcp(new IfpackPreconditionerFactory());

            if(out.get()) {
                *out << "\nprecFactory.description() = " << precFactory->description() << std::endl;
                *out << "\nprecFactory.getValidParameters() =\n";
                precFactory->getValidParameters()->print(OSTab(out).o(),0,true,false);
            }

            RCP<Teuchos::ParameterList>
            ifpackPFPL = Teuchos::rcp(new Teuchos::ParameterList("IfpackPreconditionerFactory"));
            ifpackPFPL->set("Prec Type","ILUT");
            ifpackPFPL->set("Overlap",int(1));
            if(out.get()) {
                *out << "\nifpackPFPL before setting parameters =\n";
                ifpackPFPL->print(OSTab(out).o(),0,true);
            }

            precFactory->setParameterList(ifpackPFPL);

            RCP<PreconditionerBase<double> >
            precA = precFactory->createPrec();
            Thyra::initializePrec<double>(*precFactory,A,&*precA);

            if(out.get()) {
                *out << "\nifpackPFPL after setting parameters =\n";
                ifpackPFPL->print(OSTab(out).o(),0,true);
                *out << "\nprecFactory.description() = " << precFactory->description() << std::endl;
            }

            if(out.get()) *out << "\nprecA.description() = " << precA->description() << std::endl;
            if(out.get() && dumpAll) *out << "\ndescribe(precA) =\n" << describe(*precA,Teuchos::VERB_EXTREME);

            if(out.get()) *out << "\nK) Reinitialize (A,precA->getUnspecifiedPrecOp(),PRECONDITIONER_INPUT_TYPE_AS_OPERATOR) => nsA ...\n";

            Thyra::initializePreconditionedOp<double>(*lowsFactory,A,precA,&*nsA);

            if(out.get()) *out << "\nL) Testing the LinearOpWithSolveBase interface of nsA ...\n";

            Thyra::seed_randomize<double>(0);
            result = linearOpWithSolveTester.check(*nsA,out.get());
            if(!result) success = false;

            if(testTranspose && useAztecPrec) {
                linearOpWithSolveTester.check_adjoint_default(true);
                linearOpWithSolveTester.check_adjoint_residual(true);
            }
            else {
                linearOpWithSolveTester.check_adjoint_default(false);
                linearOpWithSolveTester.check_adjoint_residual(false);
            }

        }
        else {

            if(out.get()) *out << "\nSkipping testing steps J, K, and L since we are not using aztec preconditioning and therefore will not test with an ifpack preconditioner!\n";

        }

#else // HAVE_AZTECOO_IFPACK

        if(out.get()) *out << "\nSkipping testing steps J, K, and L since they require ifpack and ifpack has not been enabled!\n";

#endif // HAVE_AZTECOO_IFPACK


        if(out.get()) *out << "\nM) Scale the epetra_A object by 2.5, and then reinitialize nsA with epetra_A ...\n";

        Thyra::uninitializeOp<double>(*lowsFactory, nsA.ptr());
        // Not required but a good idea since we are changing the matrix
        epetra_A->Scale(2.5);
        initializeOp<double>(*lowsFactory, A, nsA.ptr());

        if(out.get()) *out << "\nN) Testing the LinearOpWithSolveBase interface of nsA ...\n";

        Thyra::seed_randomize<double>(0);
        result = linearOpWithSolveTester.check(*nsA,out.get());
        if(!result) success = false;

        if(out.get()) *out << "\nO) Create a scaled (by 2.5) copy epetra_A2 of epetra_A, and then reinitialize nsA with epetra_A2 ...\n";

        RCP<Epetra_CrsMatrix>
        epetra_A2 = Teuchos::rcp(new Epetra_CrsMatrix(*epetra_A));
        epetra_A2->Scale(2.5);
        RCP<const LinearOpBase<double> >
        A2 = Thyra::epetraLinearOp(epetra_A2);
        initializeOp<double>(*lowsFactory, A2, nsA.ptr());
        // Note that it was okay not to uninitialize nsA first here since A, which
        // was used to initialize nsA last, was not changed and therefore the
        // state of nsA was fine throughout

        if(out.get()) *out << "\nP) Testing the LinearOpWithSolveBase interface of nsA ...\n";

        Thyra::seed_randomize<double>(0);
        result = linearOpWithSolveTester.check(*nsA,out.get());
        if(!result) success = false;

        if(!useAztecPrec) {

            if(out.get()) *out << "\nQ) Create an implicitly scaled (by 2.5) and transposed matrix A3 = scale(2.5,transpose(A)) and initialize nsA2 ...\n";

            RCP<const LinearOpBase<double> >
            A3 = scale<double>(2.5,transpose<double>(A));
            RCP<LinearOpWithSolveBase<double> >
            nsA2 = linearOpWithSolve(*lowsFactory,A3);

            if(out.get()) *out << "\nR) Testing the LinearOpWithSolveBase interface of nsA2 ...\n";

            Thyra::seed_randomize<double>(0);
            result = linearOpWithSolveTester.check(*nsA2,out.get());
            if(!result) success = false;

            if(out.get()) *out << "\nS) Testing that LinearOpBase interfaces of transpose(nsA) == nsA2 ...\n";

            result = linearOpTester.compare(
                         *transpose(Teuchos::rcp_implicit_cast<const LinearOpBase<double> >(nsA)),*nsA2
                         ,out()
                     );
            if(!result) success = false;

        }
        else {

            if(out.get()) *out << "\nSkipping testing steps Q, R, and S because we are using internal AztecOO preconditioners!\n";

        }

        if(out.get()) *out << "\nT) Running example use cases ...\n";

        nonExternallyPreconditionedLinearSolveUseCases(
            *A,*lowsFactory,testTranspose,*out
        );

        if(precFactory.get()) {
            externallyPreconditionedLinearSolveUseCases(
                *A,*lowsFactory,*precFactory,false,true,*out
            );
        }

#else // SUN_CXX

        if(out.get()) *out << "\nTest failed since is was not even compiled since SUN_CXX was defined!\n";
        success = false;

#endif // SUN_CXX

    }
    catch( const std::exception &excpt ) {
        std::cerr << "\n*** Caught standard exception : " << excpt.what() << std::endl;
        success = false;
    }

    return success;

}