コード例 #1
0
ファイル: OpenCLSort.cpp プロジェクト: hainm/openmm
OpenCLSort::OpenCLSort(OpenCLContext& context, SortTrait* trait, unsigned int length) : context(context), trait(trait),
            dataRange(NULL), bucketOfElement(NULL), offsetInBucket(NULL), bucketOffset(NULL), buckets(NULL), dataLength(length) {
    // Create kernels.

    std::map<std::string, std::string> replacements;
    replacements["DATA_TYPE"] = trait->getDataType();
    replacements["KEY_TYPE"] =  trait->getKeyType();
    replacements["SORT_KEY"] = trait->getSortKey();
    replacements["MIN_KEY"] = trait->getMinKey();
    replacements["MAX_KEY"] = trait->getMaxKey();
    replacements["MAX_VALUE"] = trait->getMaxValue();
    replacements["VALUE_IS_INT2"] = (trait->getDataType() == std::string("int2") ? "1" : "0");
    cl::Program program = context.createProgram(context.replaceStrings(OpenCLKernelSources::sort, replacements));
    shortListKernel = cl::Kernel(program, "sortShortList");
    computeRangeKernel = cl::Kernel(program, "computeRange");
    assignElementsKernel = cl::Kernel(program, "assignElementsToBuckets");
    computeBucketPositionsKernel = cl::Kernel(program, "computeBucketPositions");
    copyToBucketsKernel = cl::Kernel(program, "copyDataToBuckets");
    sortBucketsKernel = cl::Kernel(program, "sortBuckets");

    // Work out the work group sizes for various kernels.

    unsigned int maxGroupSize = std::min(256, (int) context.getDevice().getInfo<CL_DEVICE_MAX_WORK_GROUP_SIZE>());
    int maxSharedMem = context.getDevice().getInfo<CL_DEVICE_LOCAL_MEM_SIZE>();
    unsigned int maxLocalBuffer = (unsigned int) ((maxSharedMem/trait->getDataSize())/2);
    unsigned int maxRangeSize = std::min(maxGroupSize, (unsigned int) computeRangeKernel.getWorkGroupInfo<CL_KERNEL_WORK_GROUP_SIZE>(context.getDevice()));
    unsigned int maxPositionsSize = std::min(maxGroupSize, (unsigned int) computeBucketPositionsKernel.getWorkGroupInfo<CL_KERNEL_WORK_GROUP_SIZE>(context.getDevice()));
    unsigned int maxShortListSize = shortListKernel.getWorkGroupInfo<CL_KERNEL_WORK_GROUP_SIZE>(context.getDevice());
    // On Qualcomm's OpenCL, it's essential to check against maxShortListSize.  Otherwise you get a crash.
    // But AMD's OpenCL returns an inappropriately small value for it that is much shorter than the actual
    // maximum, so including the check hurts performance.  For the moment I'm going to just comment it out.
    // If we officially support Qualcomm in the future, we'll need to do something better.
    isShortList = (length <= maxLocalBuffer/* && length < maxShortListSize*/);
    for (rangeKernelSize = 1; rangeKernelSize*2 <= maxRangeSize; rangeKernelSize *= 2)
        ;
    positionsKernelSize = std::min(rangeKernelSize, maxPositionsSize);
    sortKernelSize = (isShortList ? rangeKernelSize : rangeKernelSize/2);
    if (rangeKernelSize > length)
        rangeKernelSize = length;
    if (sortKernelSize > maxLocalBuffer)
        sortKernelSize = maxLocalBuffer;
    unsigned int targetBucketSize = sortKernelSize/2;
    unsigned int numBuckets = length/targetBucketSize;
    if (numBuckets < 1)
        numBuckets = 1;
    if (positionsKernelSize > numBuckets)
        positionsKernelSize = numBuckets;

    // Create workspace arrays.

    if (!isShortList) {
        dataRange = new OpenCLArray(context, 2, trait->getKeySize(), "sortDataRange");
        bucketOffset = OpenCLArray::create<cl_uint>(context, numBuckets, "bucketOffset");
        bucketOfElement = OpenCLArray::create<cl_uint>(context, length, "bucketOfElement");
        offsetInBucket = OpenCLArray::create<cl_uint>(context, length, "offsetInBucket");
        buckets = new OpenCLArray(context, length, trait->getDataSize(), "buckets");
    }
}
コード例 #2
0
ファイル: OpenCLSort.cpp プロジェクト: MrBitKoin/openmm
OpenCLSort::OpenCLSort(OpenCLContext& context, SortTrait* trait, unsigned int length) : context(context), trait(trait),
            dataRange(NULL), bucketOfElement(NULL), offsetInBucket(NULL), bucketOffset(NULL), buckets(NULL), dataLength(length) {
    // Create kernels.

    std::map<std::string, std::string> replacements;
    replacements["DATA_TYPE"] = trait->getDataType();
    replacements["KEY_TYPE"] =  trait->getKeyType();
    replacements["SORT_KEY"] = trait->getSortKey();
    replacements["MIN_KEY"] = trait->getMinKey();
    replacements["MAX_KEY"] = trait->getMaxKey();
    replacements["MAX_VALUE"] = trait->getMaxValue();
    replacements["VALUE_IS_INT2"] = (trait->getDataType() == std::string("int2") ? "1" : "0");
    cl::Program program = context.createProgram(context.replaceStrings(OpenCLKernelSources::sort, replacements));
    shortListKernel = cl::Kernel(program, "sortShortList");
    computeRangeKernel = cl::Kernel(program, "computeRange");
    assignElementsKernel = cl::Kernel(program, "assignElementsToBuckets");
    computeBucketPositionsKernel = cl::Kernel(program, "computeBucketPositions");
    copyToBucketsKernel = cl::Kernel(program, "copyDataToBuckets");
    sortBucketsKernel = cl::Kernel(program, "sortBuckets");

    // Work out the work group sizes for various kernels.

    unsigned int maxGroupSize = std::min(256, (int) context.getDevice().getInfo<CL_DEVICE_MAX_WORK_GROUP_SIZE>());
    int maxSharedMem = context.getDevice().getInfo<CL_DEVICE_LOCAL_MEM_SIZE>();
    unsigned int maxLocalBuffer = (unsigned int) ((maxSharedMem/trait->getDataSize())/2);
    isShortList = (length <= maxLocalBuffer);
    for (rangeKernelSize = 1; rangeKernelSize*2 <= maxGroupSize; rangeKernelSize *= 2)
        ;
    positionsKernelSize = rangeKernelSize;
    sortKernelSize = (isShortList ? rangeKernelSize : rangeKernelSize/2);
    if (rangeKernelSize > length)
        rangeKernelSize = length;
    if (sortKernelSize > maxLocalBuffer)
        sortKernelSize = maxLocalBuffer;
    unsigned int targetBucketSize = sortKernelSize/2;
    unsigned int numBuckets = length/targetBucketSize;
    if (numBuckets < 1)
        numBuckets = 1;
    if (positionsKernelSize > numBuckets)
        positionsKernelSize = numBuckets;

    // Create workspace arrays.

    if (!isShortList) {
        dataRange = new OpenCLArray(context, 2, trait->getKeySize(), "sortDataRange");
        bucketOffset = OpenCLArray::create<cl_uint>(context, numBuckets, "bucketOffset");
        bucketOfElement = OpenCLArray::create<cl_uint>(context, length, "bucketOfElement");
        offsetInBucket = OpenCLArray::create<cl_uint>(context, length, "offsetInBucket");
        buckets = new OpenCLArray(context, length, trait->getDataSize(), "buckets");
    }
}
コード例 #3
0
OpenCLCompact::OpenCLCompact(OpenCLContext& context) : context(context), dgBlockCounts(NULL) {
    dgBlockCounts = OpenCLArray::create<cl_uint>(context, context.getNumThreadBlocks(), "dgBlockCounts");
    cl::Program program = context.createProgram(OpenCLKernelSources::compact);
    countKernel = cl::Kernel(program, "countElts");
    moveValidKernel = cl::Kernel(program, "moveValidElementsStaged");
}