ReturnType operator()(Vcf::Entry const& entry) const {
auto rawvs = Vcf::RawVariant::processEntry(entry);
ReturnType rv;
for (auto i = rawvs.begin(); i != rawvs.end(); ++i) {
// if we set the region begin to the region end then
// we would be reporting only the start position.
// that is a useful option sometimes.
rv.insert(i->region());
}
// For ref-only entries:
if (rawvs.empty()) {
Region reg{entry.start(), entry.stop()};
rv.insert(reg);
}
return rv;
}
