Task * TextReader::processDbObject(const QString &url) {
const U2DataId objDbId = SharedDbUrlUtils::getObjectIdByUrl(url);
CHECK(!objDbId.isEmpty(), createDbObjectReadFailTask(url));
const U2DbiRef dbRef = SharedDbUrlUtils::getDbRefFromEntityUrl(url);
CHECK(dbRef.isValid(), createDbObjectReadFailTask(url));
const QString objDbName = SharedDbUrlUtils::getDbObjectNameByUrl(url);
CHECK(!objDbName.isEmpty(), createDbObjectReadFailTask(url));
QScopedPointer<TextObject> obj(qobject_cast<TextObject *>(GObjectUtils::createObject(dbRef, objDbId, objDbName)));
CHECK(!obj.isNull(), createDbObjectReadFailTask(url));
sendMessage(obj->getText().toLocal8Bit());
return NULL;
}
ExportCoverageTask::ExportCoverageTask(const U2DbiRef &dbiRef, const U2DataId &assemblyId, const ExportCoverageSettings &settings, TaskFlags flags) :
Task(tr("Export assembly coverage per base"), flags),
dbiRef(dbiRef),
assemblyId(assemblyId),
settings(settings),
getAssemblyNameTask(NULL),
calculateTask(NULL),
alreadyProcessed(0)
{
SAFE_POINT_EXT(dbiRef.isValid(), setError(tr("Invalid database reference")), );
SAFE_POINT_EXT(!assemblyId.isEmpty(), setError(tr("Invalid assembly ID")), );
SAFE_POINT_EXT(!settings.url.isEmpty(), setError(tr("Invalid destination url")), );
alphabetChars << 'A' << 'C' << 'G' << 'T';
}
