コード例 #1
0
double DecisionStump<MatType>::SetupSplitDimension(
    const arma::rowvec& dimension,
    const arma::Row<size_t>& labels,
    const arma::rowvec& weights)
{
  size_t i, count, begin, end;
  double entropy = 0.0;

  // Sort the dimension in order to calculate splitting ranges.
  arma::rowvec sortedDim = arma::sort(dimension);

  // Store the indices of the sorted dimension to build a vector of sorted
  // labels.  This sort is stable.
  arma::uvec sortedIndexDim = arma::stable_sort_index(dimension.t());

  arma::Row<size_t> sortedLabels(dimension.n_elem);
  arma::rowvec sortedWeights(dimension.n_elem);

  for (i = 0; i < dimension.n_elem; i++)
  {
    sortedLabels(i) = labels(sortedIndexDim(i));

    // Apply weights if necessary.
    if (UseWeights)
      sortedWeights(i) = weights(sortedIndexDim(i));
  }

  i = 0;
  count = 0;

  // This splits the sorted data into buckets of size greater than or equal to
  // bucketSize.
  while (i < sortedLabels.n_elem)
  {
    count++;
    if (i == sortedLabels.n_elem - 1)
    {
      // If we're at the end, then don't worry about the bucket size; just take
      // this as the last bin.
      begin = i - count + 1;
      end = i;

      // Use ratioEl to calculate the ratio of elements in this split.
      const double ratioEl = ((double) (end - begin + 1) / sortedLabels.n_elem);

      entropy += ratioEl * CalculateEntropy<UseWeights>(
          sortedLabels.subvec(begin, end), sortedWeights.subvec(begin, end));
      i++;
    }
    else if (sortedLabels(i) != sortedLabels(i + 1))
    {
      // If we're not at the last element of sortedLabels, then check whether
      // count is less than the current bucket size.
      if (count < bucketSize)
      {
        // If it is, then take the minimum bucket size anyways.
        // This is where the inpBucketSize comes into use.
        // This makes sure there isn't a bucket for every change in labels.
        begin = i - count + 1;
        end = begin + bucketSize - 1;

        if (end > sortedLabels.n_elem - 1)
          end = sortedLabels.n_elem - 1;
      }
      else
      {
        // If it is not, then take the bucket size as the value of count.
        begin = i - count + 1;
        end = i;
      }
      const double ratioEl = ((double) (end - begin + 1) / sortedLabels.n_elem);

      entropy += ratioEl * CalculateEntropy<UseWeights>(
          sortedLabels.subvec(begin, end), sortedWeights.subvec(begin, end));

      i = end + 1;
      count = 0;
    }
    else
      i++;
  }
  return entropy;
}
コード例 #2
0
 double mahalanobis_chol(const arma::rowvec& x, const arma::rowvec& mu, const arma::mat& R) {
   const arma::rowvec err = x - mu;
   const arma::mat Rinv(inv(trimatl(R)));
   return arma::as_scalar(err * Rinv * Rinv.t() * err.t());
 }
コード例 #3
0
ファイル: mcmc.math.hpp プロジェクト: armaMCMC/dfcomb
 double mahalanobis(const arma::rowvec& x, const arma::rowvec& mu, const arma::mat& sigma) {
   const arma::rowvec err = x - mu;
   return arma::as_scalar(err * sigma.i() * err.t());
 }
コード例 #4
0
void DecisionStump<MatType>::TrainOnAtt(const arma::rowvec& attribute,
                                        const arma::Row<size_t>& labels)
{
  size_t i, count, begin, end;

  arma::rowvec sortedSplitAtt = arma::sort(attribute);
  arma::uvec sortedSplitIndexAtt = arma::stable_sort_index(attribute.t());
  arma::Row<size_t> sortedLabels(attribute.n_elem);
  sortedLabels.fill(0);
  arma::vec tempSplit;
  arma::Row<size_t> tempLabel;

  for (i = 0; i < attribute.n_elem; i++)
    sortedLabels(i) = labels(sortedSplitIndexAtt(i));

  arma::rowvec subCols;
  rType mostFreq;
  i = 0;
  count = 0;
  while (i < sortedLabels.n_elem)
  {
    count++;
    if (i == sortedLabels.n_elem - 1)
    {
      begin = i - count + 1;
      end = i;

      arma::rowvec zSubCols((sortedLabels.cols(begin, end)).n_elem);
      zSubCols.fill(0.0);

      subCols = sortedLabels.cols(begin, end) + zSubCols;

      mostFreq = CountMostFreq<double>(subCols);

      split.resize(split.n_elem + 1);
      split(split.n_elem - 1) = sortedSplitAtt(begin);
      binLabels.resize(binLabels.n_elem + 1);
      binLabels(binLabels.n_elem - 1) = mostFreq;

      i++;
    }
    else if (sortedLabels(i) != sortedLabels(i + 1))
    {
      if (count < bucketSize)
      {
        // Test for different values of bucketSize, especially extreme cases.
        begin = i - count + 1;
        end = begin + bucketSize - 1;

        if (end > sortedLabels.n_elem - 1)
          end = sortedLabels.n_elem - 1;
      }
      else
      {
        begin = i - count + 1;
        end = i;
      }
      arma::rowvec zSubCols((sortedLabels.cols(begin, end)).n_elem);
      zSubCols.fill(0.0);

      subCols = sortedLabels.cols(begin, end) + zSubCols;

      // Find the most frequent element in subCols so as to assign a label to
      // the bucket of subCols.
      mostFreq = CountMostFreq<double>(subCols);

      split.resize(split.n_elem + 1);
      split(split.n_elem - 1) = sortedSplitAtt(begin);
      binLabels.resize(binLabels.n_elem + 1);
      binLabels(binLabels.n_elem - 1) = mostFreq;

      i = end + 1;
      count = 0;
    }
    else
      i++;
  }

  // Now trim the split matrix so that buckets one after the after which point
  // to the same classLabel are merged as one big bucket.
  MergeRanges();
}