コード例 #1
0
//----------------------------------------------------------------------------
//
// Random fracture criterion function.
//
bool
RandomCriterion::computeFractureCriterion(stk_classic::mesh::Entity& entity, double p) {

  // Fracture only defined on the boundary of the elements
  stk_classic::mesh::EntityRank rank = entity.entity_rank();
  assert(rank == num_dim_ - 1);

  stk_classic::mesh::PairIterRelation neighbor_elems =
    entity.relations(element_rank_);

  // Need an element on each side
  if(neighbor_elems.size() != 2)
    return false;

  bool is_open = false;

  // All we need to do is generate a number between 0 and 1
  double random = 0.5 + 0.5 * Teuchos::ScalarTraits<double>::random();

  if(random < p) {
    is_open = true;
  }

  return is_open;
}
コード例 #2
0
      void 
      createNewElements(percept::PerceptMesh& eMesh, NodeRegistry& nodeRegistry, 
                        stk_classic::mesh::Entity& element,  NewSubEntityNodesType& new_sub_entity_nodes, vector<stk_classic::mesh::Entity *>::iterator& element_pool,
                        stk_classic::mesh::FieldBase *proc_rank_field=0)
      {
        const CellTopologyData * const cell_topo_data = stk_classic::percept::PerceptMesh::get_cell_topology(element);
        typedef boost::tuple<stk_classic::mesh::EntityId, stk_classic::mesh::EntityId, stk_classic::mesh::EntityId> tri_tuple_type;
        static vector<tri_tuple_type> elems(4);

        CellTopology cell_topo(cell_topo_data);
        const stk_classic::mesh::PairIterRelation elem_nodes = element.relations(stk_classic::mesh::fem::FEMMetaData::NODE_RANK);

        //stk_classic::mesh::Part & active = mesh->ActivePart();
        //stk_classic::mesh::Part & quad4  = mesh->QuadPart();

        std::vector<stk_classic::mesh::Part*> add_parts;
        std::vector<stk_classic::mesh::Part*> remove_parts;

        add_parts = m_toParts;
        
        //std::cout << "P["<< m_eMesh.get_rank() << "] add_parts = " << add_parts << std::endl;

        stk_classic::mesh::EntityRank my_rank = m_primaryEntityRank;

        nodeRegistry.makeCentroidCoords(*const_cast<stk_classic::mesh::Entity *>(&element), my_rank, 0u);
        nodeRegistry.addToExistingParts(*const_cast<stk_classic::mesh::Entity *>(&element), my_rank, 0u);
        nodeRegistry.interpolateFields(*const_cast<stk_classic::mesh::Entity *>(&element), my_rank, 0u);
        
#define CENTROID_N NN(m_primaryEntityRank, 0)  

        elems[0] = tri_tuple_type(VERT_N(0), VERT_N(1), CENTROID_N);
        elems[1] = tri_tuple_type(VERT_N(1), VERT_N(2), CENTROID_N);
        elems[2] = tri_tuple_type(VERT_N(2), VERT_N(3), CENTROID_N);
        elems[3] = tri_tuple_type(VERT_N(3), VERT_N(0), CENTROID_N);

#undef CENTROID_N

        // write a diagram of the refinement pattern as a vtk file, or a latex/tikz/pgf file
#define WRITE_DIAGRAM 0
#if WRITE_DIAGRAM

        /**
           \node[above] at (p4.side 1){2};
           \node[left] at (p4.side 2){3};
           \node[below] at (p4.side 3){0};
           \node[right] at (p4.side 4){1};
        */

#endif
        
        for (unsigned ielem=0; ielem < elems.size(); ielem++)
          {
            stk_classic::mesh::Entity& newElement = *(*element_pool);

            //std::cout << "P["<< m_eMesh.get_rank() << "] urp tmp 3 "  << proc_rank_field << std::endl;
            if (proc_rank_field && element.entity_rank() == m_eMesh.element_rank())
              {
                double *fdata = stk_classic::mesh::field_data( *static_cast<const ScalarFieldType *>(proc_rank_field) , newElement );
                fdata[0] = double(newElement.owner_rank());
              }

            //std::cout << "P["<< m_eMesh.get_rank() << "] urp tmp 4 "  << std::endl;
            change_entity_parts(eMesh, element, newElement);

            //std::cout << "P["<< m_eMesh.get_rank() << "] urp tmp 5 "  << std::endl;

            {
              if (!elems[ielem].get<0>())
                {
                  std::cout << "P[" << eMesh.get_rank() << " nid = 0 << " << std::endl;
                  exit(1);
                }

            }
            //std::cout << "P["<< m_eMesh.get_rank() << "] urp tmp 6 "  << std::endl;

            eMesh.get_bulk_data()->declare_relation(newElement, eMesh.createOrGetNode(elems[ielem].get<0>()), 0);
            eMesh.get_bulk_data()->declare_relation(newElement, eMesh.createOrGetNode(elems[ielem].get<1>()), 1);
            eMesh.get_bulk_data()->declare_relation(newElement, eMesh.createOrGetNode(elems[ielem].get<2>()), 2);

            //std::cout << "P["<< m_eMesh.get_rank() << "] urp tmp 7 "  << std::endl;
            set_parent_child_relations(eMesh, element, newElement, ielem);

            element_pool++;

          }

      }
コード例 #3
0
ファイル: IntegratedOp.hpp プロジェクト: 00liujj/trilinos
      bool helperSubDim(const stk_classic::mesh::Entity& child_element, stk_classic::mesh::FieldBase *field,  const mesh::BulkData& bulkData)
      {
        EXCEPTWATCH;

        const CellTopologyData * const child_cell_topo_data = stk_classic::percept::PerceptMesh::get_cell_topology(child_element);
        CellTopology child_cell_topo(child_cell_topo_data);
        int child_cell_dimension = child_cell_topo.getDimension();
        int meta_dimension = mesh::fem::FEMMetaData::get_meta_data(mesh::fem::FEMMetaData::get(bulkData)).get_spatial_dimension();

        // for now, only allow face (or edge)
        VERIFY_OP_ON(child_cell_dimension, ==, meta_dimension - 1, "Dimensions don't match");
        
        VectorFieldType& coord_field = *(mesh::fem::FEMMetaData::get(bulkData)).get_field<VectorFieldType>("coordinates");

        // FIXME for fields not on a Node
        unsigned nDOF = m_nDOFs;

        unsigned nCells = PerceptMesh::size1(child_element);
        m_count_elems += nCells;

        typedef IntrepidManager IM;
        unsigned cubDegree = m_cubDegree;
        const stk_classic::mesh::PairIterRelation parent_elements = child_element.relations(child_element.entity_rank() + 1);
        VERIFY_OP_ON(parent_elements.size(), ==, 1, "cant find parent");
        const stk_classic::mesh::Entity& element = *parent_elements[0].entity();
        unsigned i_face = parent_elements[0].identifier();

        const CellTopologyData * const cell_topo_data = stk_classic::percept::PerceptMesh::get_cell_topology(element);
        CellTopology cell_topo(cell_topo_data);
        int cell_dimension = cell_topo.getDimension();
        VERIFY_OP_ON(cell_dimension, ==, meta_dimension , "Dimensions don't match");

        IM im(Elements_Tag(nCells), cell_topo, cubDegree);
        IM imChild(Elements_Tag(nCells), child_cell_topo, cubDegree);
        unsigned numCubPoints_child = imChild.m_cub->getNumPoints(); 
        im.m_Cub_Points_Tag = Cub_Points_Tag(numCubPoints_child);

        if (0)
          {
            std::cout << "numCubPoints_child= " << numCubPoints_child 
                      << " parent rank= " << element.entity_rank()
                      << " parent topo= " << cell_topo.getName()
                      << std::endl;
          }

        // FIXME
        im.m_DOFs_Tag.num = m_nDOFs;
        // FIXME

        // _c suffix is for the child (face) element
        IM::Jacobian              J  (im);
        IM::FaceNormal           fn  (im);
        //IM::JacobianDet          dJ  (im);
        IM::CubaturePoints       xi  (im);
        IM::CubaturePoints       xi_c  (imChild);
        IM::CellWorkSet          cn  (im);
        IM::CubatureWeights      wt  (im);
        IM::CubatureWeights      wt_c  (imChild);
        IM::PhysicalCoords       pc  (im);
        IM::IntegrandValues      iv  (im);
        IM::IntegrandValuesDOF  ivD  (im);
        IM::Integral             Io  (im);
        IM::Bases                Nb  (im);

        IM::WeightedMeasure wXfn  (im);
        IM::FieldValues       fv  (im);

        imChild.m_cub->getCubature(xi_c, wt_c);

        unsigned spaceDim = im.m_Spatial_Dim_Tag.num;

        PerceptMesh::fillCellNodes(element,  &coord_field, cn, spaceDim);

        // get parent cell integration points
        // Map Gauss points on quad to reference face: paramGaussPoints -> refGaussPoints
        Intrepid::CellTools<double>::mapToReferenceSubcell(xi,
                                                 xi_c,
                                                 2, i_face, cell_topo);  // FIXME magic

        // get jacobian
        J(xi, cn, cell_topo);
        //dJ(J);

        //shards::ArrayVector<double, shards::NaturalOrder, Elements_Tag, Cub_Points_Tag > fn_Norm;

        // FIXME
        //fn(J, i_face, cell_topo);
        MDArray J_mda;
        J.copyTo(J_mda);
        MDArray fn_mda(im.m_Elements_Tag.num, numCubPoints_child, spaceDim);
        Intrepid::CellTools<double>::getPhysicalFaceNormals(fn_mda, J_mda, i_face, cell_topo);

        /// get norm of fn
        for (int icell = 0; icell < im.m_Elements_Tag.num; icell++)
          {
            for (int ipt = 0; ipt < (int)numCubPoints_child; ipt++)
              {
                double sum = 0.0;
                for (int i = 0; i < (int)spaceDim; i++)
                  {
                    sum += square(fn_mda(icell, ipt, i));
                  }
                wXfn(icell, ipt) = std::sqrt(sum) * wt_c(ipt);
              }
          }

        if (0)
          {
            using namespace shards;

            //std::cout << "dJ= \n" << dJ << std::endl;
            std::cout << "wXfn= \n" << wXfn << std::endl;
            std::cout << "xi= \n" << xi << std::endl;
            std::cout << "wt= \n" << wt << std::endl;
            std::cout << "cn= \n" << cn << std::endl;
            Util::setDoPause(true);
            Util::pause(true);
          }

        // get physical coordinates at integration points
        pc(cn, xi);

        // get bases
#if 1
        // FIXME
        MDArray xi_mda;
        xi.copyTo(xi_mda);
        Nb(element, xi_mda);
#else
        Nb(element, xi);
#endif

        // apply integrand (right now we have MDArray hard-coded... FIXME - templatize on its type)
        // it should look like this (one instead of multiple lines):
#if 0
        m_integrand(pc, v);
#else
        MDArray pc_mda;
        pc.copyTo(pc_mda);
        std::vector<int>  ivDims;
        ivD.dimensions( ivDims);


        /// NOTE: m_integrand requires the ranks of in/out MDArrays to be such that out_rank >= in_rank
        /// Thus, we use IntegrandValuesDOF with [DOF] = 1, and then copy the result to IntegrandValues
        /// which does not have the additional rightmost DOF index (Intrepid doesn't have the concept of
        /// DOF's, it works on scalars only for the integration routines, or at least that's how I understand
        /// it currently.

        // create an array that stk_classic::percept::Function will like to hold the results

        ivDims[ivDims.size()-1] = m_nDOFs;

        MDArray iv_mda ( Teuchos::Array<int>(ivDims.begin(), ivDims.end()));

        if (m_turboOpt == TURBO_ELEMENT || m_turboOpt == TURBO_BUCKET)
          {
            m_integrand(pc_mda, iv_mda, element, xi_mda);
          }
        else
          {
            m_integrand(pc_mda, iv_mda);
          }

        // now, copy from the results to an array that Intrepid::integrate will like

#endif

        for (unsigned iDof = 0; iDof < nDOF; iDof++)
          {
            iv.copyFrom(im, iv_mda, iDof);

            // get the integral
            if (m_accumulation_type == ACCUMULATE_SUM)
              {
                Io(iv, wXfn, Intrepid::COMP_BLAS);
              }

            //optional design:
            //
            //  Io(integrand(pc_mda, v), wXdJ(w, dJ(J(xi, c, cell_topo)), Intrepid::COMP_BLAS);

            for (unsigned iCell = 0; iCell < nCells; iCell++)
              {
                //                 if (Util::getFlag(0))
                //                   {
                //                     std::cout << "tmp Io(iCell)= " << Io(iCell) << std::endl;
                //                     Util::pause(true, "Io(iCell)");
                //                   }
                if (m_accumulation_type == ACCUMULATE_SUM)
                  {
                    m_accumulation_buffer[iDof] += Io(iCell);
                  }
                else if (m_accumulation_type == ACCUMULATE_MAX)
                  {
                    double valIo = 0.0;
                    for (int ivpts = 0; ivpts < iv.dimension(1); ivpts++)
                      {
                        valIo = std::max(valIo, iv((int)iCell, ivpts));
                      }
                    //std::cout << "m_accumulation_buffer[iDof] = " << m_accumulation_buffer[iDof] << " valIO= " << valIo  << std::endl;
                    m_accumulation_buffer[iDof] = std::max(m_accumulation_buffer[iDof], valIo);
                  }
              }
          }
        return false;
      }