void SingletonFilter<MatrixType>::CreateReducedRHSTempl(const Tpetra::MultiVector<DomainScalar,LocalOrdinal,GlobalOrdinal,Node>& LHS,
                                                        const Tpetra::MultiVector<RangeScalar,LocalOrdinal,GlobalOrdinal,Node>& RHS,
                                                        Tpetra::MultiVector<RangeScalar,LocalOrdinal,GlobalOrdinal,Node>& ReducedRHS)
{
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const RangeScalar > > RHS_ptr = RHS.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const DomainScalar> > LHS_ptr = LHS.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<RangeScalar> >        ReducedRHS_ptr = ReducedRHS.get2dViewNonConst();

  size_t NumVectors = LHS.getNumVectors();

  for (size_t i = 0 ; i < NumRows_ ; ++i)
    for (size_t k = 0 ; k < NumVectors ; ++k)
      ReducedRHS_ptr[k][i] = RHS_ptr[k][InvReorder_[i]];

  for (size_t i = 0 ; i < NumRows_ ; ++i) {
    LocalOrdinal ii = InvReorder_[i];
    size_t Nnz;
    A_->getLocalRowCopy(ii,Indices_(),Values_(),Nnz);

    for (size_t j = 0 ; j < Nnz ; ++j) {
      if (Reorder_[Indices_[j]] == -1) {
        for (size_t k = 0 ; k < NumVectors ; ++k)
          ReducedRHS_ptr[k][i] -= (RangeScalar)Values_[j] * (RangeScalar)LHS_ptr[k][Indices_[j]];
      }
    }
  }
}
コード例 #2
0
void OverlappingRowMatrix<MatrixType>::applyTempl(const Tpetra::MultiVector<DomainScalar,LocalOrdinal,GlobalOrdinal,Node> &X, 
						  Tpetra::MultiVector<RangeScalar,LocalOrdinal,GlobalOrdinal,Node> &Y, 
						  Teuchos::ETransp mode, 
						  RangeScalar alpha,
						  RangeScalar beta) const
{
  // Note: This isn't AztecOO compliant.  But neither was Ifpack's version.
  TEUCHOS_TEST_FOR_EXCEPTION(X.getNumVectors() != Y.getNumVectors(), std::runtime_error,
			     "Ifpack2::OverlappingRowMatrix::apply ERROR: X.getNumVectors() != Y.getNumVectors().");

  RangeScalar zero = Teuchos::ScalarTraits<RangeScalar>::zero();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const DomainScalar> > x_ptr = X.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<RangeScalar> >        y_ptr = Y.get2dViewNonConst();
  Y.putScalar(zero);
  size_t NumVectors = Y.getNumVectors();

  for (size_t i = 0 ; i < NumMyRowsA_ ; ++i) {
    size_t Nnz;
    // Use this class's getrow to make the below code simpler
    A_->getLocalRowCopy(i,Indices_(),Values_(),Nnz);
    if (mode==Teuchos::NO_TRANS){
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][i] += (RangeScalar)Values_[j] * (RangeScalar)x_ptr[k][Indices_[j]];      
    }
    else if (mode==Teuchos::TRANS){
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][Indices_[j]] += (RangeScalar)Values_[j] * (RangeScalar)x_ptr[k][i];
    }
    else { //mode==Teuchos::CONJ_TRANS
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][Indices_[j]] += Teuchos::ScalarTraits<RangeScalar>::conjugate((RangeScalar)Values_[j]) * (RangeScalar)x_ptr[k][i];
    }
  }

 for (size_t i = 0 ; i < NumMyRowsB_ ; ++i) {
    size_t Nnz;
    // Use this class's getrow to make the below code simpler
    ExtMatrix_->getLocalRowCopy(i,Indices_(),Values_(),Nnz);
    if (mode==Teuchos::NO_TRANS){
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][NumMyRowsA_+i] += (RangeScalar)Values_[j] * (RangeScalar)x_ptr[k][Indices_[j]];      
    }
    else if (mode==Teuchos::TRANS){
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][NumMyRowsA_+Indices_[j]] += (RangeScalar)Values_[j] * (RangeScalar)x_ptr[k][i];
    }
    else { //mode==Teuchos::CONJ_TRANS
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][NumMyRowsA_+Indices_[j]] += Teuchos::ScalarTraits<RangeScalar>::conjugate((RangeScalar)Values_[j]) * (RangeScalar)x_ptr[k][i];
    }
  }
}
void SingletonFilter<MatrixType>::UpdateLHSTempl(const Tpetra::MultiVector<DomainScalar,LocalOrdinal,GlobalOrdinal,Node>& ReducedLHS,
                                                 Tpetra::MultiVector<RangeScalar,LocalOrdinal,GlobalOrdinal,Node>& LHS)
{

  Teuchos::ArrayRCP<Teuchos::ArrayRCP<RangeScalar> >        LHS_ptr = LHS.get2dViewNonConst();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const DomainScalar> >  ReducedLHS_ptr = ReducedLHS.get2dView();

  for (size_t i = 0 ; i < NumRows_ ; ++i)
    for (size_t k = 0 ; k < LHS.getNumVectors() ; ++k)
      LHS_ptr[k][InvReorder_[i]] = (RangeScalar)ReducedLHS_ptr[k][i];
}
コード例 #4
0
void ReorderFilter<MatrixType>::permuteReorderedToOriginalTempl(const Tpetra::MultiVector<DomainScalar,LocalOrdinal,GlobalOrdinal,Node> &reorderedX, 
								Tpetra::MultiVector<RangeScalar,LocalOrdinal,GlobalOrdinal,Node> &originalY) const
{
  TEUCHOS_TEST_FOR_EXCEPTION(reorderedX.getNumVectors() != originalY.getNumVectors(), std::runtime_error,
			     "Ifpack2::ReorderFilter::permuteReorderedToOriginal ERROR: X.getNumVectors() != Y.getNumVectors().");

  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const DomainScalar> > x_ptr = reorderedX.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<RangeScalar> >        y_ptr = originalY.get2dViewNonConst();

  for(size_t k=0; k < reorderedX.getNumVectors(); k++)
    for(LocalOrdinal i=0; (size_t)i< reorderedX.getLocalLength(); i++)
      y_ptr[k][reverseperm_[i]] = (RangeScalar)x_ptr[k][i];
}
コード例 #5
0
void ReorderFilter<MatrixType>::permuteOriginalToReorderedTempl(const Tpetra::MultiVector<DomainScalar,local_ordinal_type,global_ordinal_type,node_type> &originalX,
                                                                Tpetra::MultiVector<RangeScalar,local_ordinal_type,global_ordinal_type,node_type> &reorderedY) const
{
  TEUCHOS_TEST_FOR_EXCEPTION(originalX.getNumVectors() != reorderedY.getNumVectors(), std::runtime_error,
                             "Ifpack2::ReorderFilter::permuteOriginalToReordered ERROR: X.getNumVectors() != Y.getNumVectors().");

  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const DomainScalar> > x_ptr = originalX.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<RangeScalar> >        y_ptr = reorderedY.get2dViewNonConst();

  for(size_t k=0; k < originalX.getNumVectors(); k++)
    for(local_ordinal_type i=0; (size_t)i< originalX.getLocalLength(); i++)
      y_ptr[k][perm_[i]] = (RangeScalar)x_ptr[k][i];
}
コード例 #6
0
void ReorderFilter<MatrixType>::
apply (const Tpetra::MultiVector<scalar_type,local_ordinal_type,global_ordinal_type,node_type> &X,
       Tpetra::MultiVector<scalar_type,local_ordinal_type,global_ordinal_type,node_type> &Y,
       Teuchos::ETransp mode,
       scalar_type alpha,
       scalar_type beta) const
{
  typedef Teuchos::ScalarTraits<scalar_type> STS;

  // Note: This isn't AztecOO compliant.  But neither was Ifpack's version.
  // Note: The localized maps mean the matvec is trivial (and has no import)
  TEUCHOS_TEST_FOR_EXCEPTION(
    X.getNumVectors() != Y.getNumVectors(), std::runtime_error,
    "Ifpack2::ReorderFilter::apply: X.getNumVectors() != Y.getNumVectors().");

  const scalar_type zero = STS::zero ();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const scalar_type> > x_ptr = X.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<scalar_type> > y_ptr = Y.get2dViewNonConst();

  Y.putScalar (zero);
  const size_t NumVectors = Y.getNumVectors ();

  for (size_t i = 0; i < A_->getNodeNumRows (); ++i) {
    size_t Nnz;
    // Use this class's getrow to make the below code simpler
    getLocalRowCopy (i, Indices_ (), Values_ (), Nnz);
    if (mode == Teuchos::NO_TRANS) {
      for (size_t j = 0; j < Nnz; ++j) {
        for (size_t k = 0; k < NumVectors; ++k) {
          y_ptr[k][i] += Values_[j] * x_ptr[k][Indices_[j]];
        }
      }
    }
    else if (mode == Teuchos::TRANS) {
      for (size_t j = 0; j < Nnz; ++j) {
        for (size_t k = 0; k < NumVectors; ++k) {
          y_ptr[k][Indices_[j]] += Values_[j] * x_ptr[k][i];
        }
      }
    }
    else { //mode==Teuchos::CONJ_TRANS
      for (size_t j = 0; j < Nnz; ++j) {
        for (size_t k = 0; k < NumVectors; ++k) {
          y_ptr[k][Indices_[j]] += STS::conjugate(Values_[j]) * x_ptr[k][i];
        }
      }
    }
  }
}
void SingletonFilter<MatrixType>::SolveSingletonsTempl(const Tpetra::MultiVector<DomainScalar,LocalOrdinal,GlobalOrdinal,Node>& RHS,
                                                       Tpetra::MultiVector<RangeScalar,LocalOrdinal,GlobalOrdinal,Node>& LHS)
{
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const DomainScalar> > RHS_ptr = RHS.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<RangeScalar> >        LHS_ptr = LHS.get2dViewNonConst();

  for (size_t i = 0 ; i < NumSingletons_ ; ++i) {
    LocalOrdinal ii = SingletonIndex_[i];
    // get the diagonal value for the singleton
    size_t Nnz;
    A_->getLocalRowCopy(ii,Indices_(),Values_(),Nnz);
    for (size_t j = 0 ; j < Nnz ; ++j) {
      if (Indices_[j] == ii) {
        for (size_t k = 0 ; k < LHS.getNumVectors() ; ++k)
          LHS_ptr[k][ii] = (RangeScalar)RHS_ptr[k][ii] / (RangeScalar)Values_[j];
      }
    }
  }
}
コード例 #8
0
void SingletonFilter<MatrixType>::apply(const Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &X, 
				       Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &Y, 
				       Teuchos::ETransp mode, 
				       Scalar alpha,
				       Scalar beta) const
{  
  // Note: This isn't AztecOO compliant.  But neither was Ifpack's version.

  TEUCHOS_TEST_FOR_EXCEPTION(X.getNumVectors() != Y.getNumVectors(), std::runtime_error,
			     "Ifpack2::SingletonFilter::apply ERROR: X.getNumVectors() != Y.getNumVectors().");

  Scalar zero = Teuchos::ScalarTraits<Scalar>::zero();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const Scalar> > x_ptr = X.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<Scalar> >       y_ptr = Y.get2dViewNonConst();

  Y.putScalar(zero);
  size_t NumVectors = Y.getNumVectors();


  for (size_t i = 0 ; i < NumRows_ ; ++i) {
    size_t Nnz;
    // Use this class's getrow to make the below code simpler
    getLocalRowCopy(i,Indices_(),Values_(),Nnz);
    if (mode==Teuchos::NO_TRANS){
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][i] += Values_[j] * x_ptr[k][Indices_[j]];      
    }
    else if (mode==Teuchos::TRANS){
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][Indices_[j]] += Values_[j] * x_ptr[k][i];
    }
    else { //mode==Teuchos::CONJ_TRANS
      for (size_t j = 0 ; j < Nnz ; ++j) 
	for (size_t k = 0 ; k < NumVectors ; ++k)
	  y_ptr[k][Indices_[j]] += Teuchos::ScalarTraits<Scalar>::conjugate(Values_[j]) * x_ptr[k][i];
    }
  }
}
コード例 #9
0
void TomBlockRelaxation<MatrixType,ContainerType>::DoSGS(const Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& X, 
						      Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& Xcopy, 
						      Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& Y) const
{
  Scalar one=Teuchos::ScalarTraits<Scalar>::one();
  int Length = A_->getNodeMaxNumRowEntries(); 
  int NumVectors = X.getNumVectors();
  Teuchos::Array<Scalar>         Values;
  Teuchos::Array<LocalOrdinal>   Indices;
  Values.resize(Length);
  Indices.resize(Length);

  // an additonal vector is needed by parallel computations
  // (note that applications through Ifpack2_AdditiveSchwarz
  // are always seen are serial)
  Teuchos::RCP< Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node > > Y2;
  if (IsParallel_)
    Y2 = Teuchos::rcp( new Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>(Importer_->getTargetMap(), NumVectors) );
  else
    Y2 = Teuchos::rcp( &Y, false );

  Teuchos::ArrayRCP<Teuchos::ArrayRCP<const Scalar> > x_ptr       = X.get2dView();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<Scalar> >       xcopy_ptr   = Xcopy.get2dViewNonConst();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<Scalar> >       y_ptr       = Y.get2dViewNonConst();
  Teuchos::ArrayRCP<Teuchos::ArrayRCP<Scalar> >       y2_ptr      = Y2->get2dViewNonConst();

  // data exchange is here, once per sweep
  if (IsParallel_)  Y2->doImport(Y,*Importer_,Tpetra::INSERT);

  // Forward Sweep
  for(LocalOrdinal i = 0 ; i < NumLocalBlocks_ ; i++) {
    // may happen that a partition is empty
    if (Containers_[i]->getNumRows() == 0) continue;
    LocalOrdinal LID;

    // update from previous block
    for(size_t j = 0 ; j < Containers_[i]->getNumRows(); j++) {
      LID = Containers_[i]->ID(j);
      size_t NumEntries;
      A_->getLocalRowCopy(LID,Indices(),Values(),NumEntries);

      for (size_t k = 0 ; k < NumEntries ; k++) {
        LocalOrdinal col = Indices[k];
        for (int kk = 0 ; kk < NumVectors ; kk++) 
          xcopy_ptr[kk][LID] -= Values[k] * y2_ptr[kk][col];
      }
    }
    // solve with this block
    // Note: I'm abusing the ordering information, knowing that X/Y and Y2 have the same ordering for on-proc unknowns.
    // Note: Add flop counts for inverse apply
    Containers_[i]->apply(Xcopy,*Y2,Teuchos::NO_TRANS,DampingFactor_,one);

    // operations for all getrow's
    ApplyFlops_ += NumVectors * (2 * NumGlobalNonzeros_ + 2 * NumGlobalRows_);
  }// end forward sweep

  // Reverse Sweep
  Xcopy = X;
  for(LocalOrdinal i = NumLocalBlocks_-1; i >=0 ; i--) {
    // may happen that a partition is empty
    if (Containers_[i]->getNumRows() == 0) continue;
    LocalOrdinal LID;

    // update from previous block
    for(size_t j = 0 ; j < Containers_[i]->getNumRows(); j++) {
      LID = Containers_[i]->ID(j);
      size_t NumEntries;
      A_->getLocalRowCopy(LID,Indices(),Values(),NumEntries);

      for (size_t k = 0 ; k < NumEntries ; k++) {
        LocalOrdinal col = Indices[k];
        for (int kk = 0 ; kk < NumVectors ; kk++) 
          xcopy_ptr[kk][LID] -= Values[k] * y2_ptr[kk][col];
      }
    }
    
    // solve with this block
    // Note: I'm abusing the ordering information, knowing that X/Y and Y2 have the same ordering for on-proc unknowns.
    // Note: Add flop counts for inverse apply
    Containers_[i]->apply(Xcopy,*Y2,Teuchos::NO_TRANS,DampingFactor_,one);

    // operations for all getrow's
    ApplyFlops_ += NumVectors * (2 * NumGlobalNonzeros_ + 2 * NumGlobalRows_);
  } //end reverse sweep


  // Attention: this is delicate... Not all combinations
  // of Y2 and Y will always work (tough for ML it should be ok)
  if (IsParallel_)
    for (int m = 0 ; m < NumVectors ; ++m) 
      for (size_t i = 0 ; i < NumMyRows_ ; ++i)
        y_ptr[m][i] = y2_ptr[m][i];
}
コード例 #10
0
void
OverlappingRowMatrix<MatrixType>::
apply (const Tpetra::MultiVector<scalar_type,local_ordinal_type,global_ordinal_type,node_type> &X,
       Tpetra::MultiVector<scalar_type,local_ordinal_type,global_ordinal_type,node_type> &Y,
       Teuchos::ETransp mode,
       scalar_type alpha,
       scalar_type beta) const
{
  using Teuchos::ArrayRCP;
  using Teuchos::as;
  typedef scalar_type RangeScalar;
  typedef scalar_type DomainScalar;

  typedef Teuchos::ScalarTraits<RangeScalar> STRS;
  TEUCHOS_TEST_FOR_EXCEPTION(
    X.getNumVectors() != Y.getNumVectors(), std::runtime_error,
    "Ifpack2::OverlappingRowMatrix::apply: The input X and the output Y must "
    "have the same number of columns.  X.getNumVectors() = "
    << X.getNumVectors() << " != Y.getNumVectors() = " << Y.getNumVectors()
    << ".");

  // FIXME (mfh 13 July 2013) This would be a good candidate for a
  // Kokkos local parallel operator implementation.  That would
  // obviate the need for getting views of the data and make the code
  // below a lot simpler.

  const RangeScalar zero = STRS::zero ();
  ArrayRCP<ArrayRCP<const DomainScalar> > x_ptr = X.get2dView();
  ArrayRCP<ArrayRCP<RangeScalar> >        y_ptr = Y.get2dViewNonConst();
  Y.putScalar(zero);
  size_t NumVectors = Y.getNumVectors();

  const size_t numMyRowsA = A_->getNodeNumRows ();
  for (size_t i = 0; i < numMyRowsA; ++i) {
    size_t Nnz;
    // Use this class's getrow to make the below code simpler
    A_->getLocalRowCopy (i, Indices_ (),Values_ (), Nnz);
    if (mode == Teuchos::NO_TRANS) {
      for (size_t j = 0; j < Nnz; ++j)
        for (size_t k = 0; k < NumVectors; ++k)
          y_ptr[k][i] += as<RangeScalar> (Values_[j]) *
            as<RangeScalar> (x_ptr[k][Indices_[j]]);
    }
    else if (mode == Teuchos::TRANS){
      for (size_t j = 0; j < Nnz; ++j)
        for (size_t k = 0; k < NumVectors; ++k)
          y_ptr[k][Indices_[j]] += as<RangeScalar> (Values_[j]) *
            as<RangeScalar> (x_ptr[k][i]);
    }
    else { // mode == Teuchos::CONJ_TRANS
      for (size_t j = 0; j < Nnz; ++j)
        for (size_t k = 0; k < NumVectors; ++k)
          y_ptr[k][Indices_[j]] +=
            STRS::conjugate (as<RangeScalar> (Values_[j])) *
            as<RangeScalar> (x_ptr[k][i]);
    }
  }

  const size_t numMyRowsB = ExtMatrix_->getNodeNumRows ();
  for (size_t i = 0 ; i < numMyRowsB ; ++i) {
    size_t Nnz;
    // Use this class's getrow to make the below code simpler
    ExtMatrix_->getLocalRowCopy (i, Indices_ (), Values_ (), Nnz);
    if (mode == Teuchos::NO_TRANS) {
      for (size_t j = 0; j < Nnz; ++j)
        for (size_t k = 0; k < NumVectors; ++k)
          y_ptr[k][numMyRowsA+i] += as<RangeScalar> (Values_[j]) *
            as<RangeScalar> (x_ptr[k][Indices_[j]]);
    }
    else if (mode == Teuchos::TRANS) {
      for (size_t j = 0; j < Nnz; ++j)
        for (size_t k = 0; k < NumVectors; ++k)
          y_ptr[k][numMyRowsA+Indices_[j]] += as<RangeScalar> (Values_[j]) *
            as<RangeScalar> (x_ptr[k][i]);
    }
    else { // mode == Teuchos::CONJ_TRANS
      for (size_t j = 0; j < Nnz; ++j)
        for (size_t k = 0; k < NumVectors; ++k)
          y_ptr[k][numMyRowsA+Indices_[j]] +=
            STRS::conjugate (as<RangeScalar> (Values_[j])) *
            as<RangeScalar> (x_ptr[k][i]);
    }
  }
}