Int2 Main(void)
{
AsnIoPtr aip;
SeqEntryPtr sep;
BytePtr buf;
Uint2 size = 32000, count;
AsnIoMemPtr aimp;
/* check command line arguments */
if ( ! GetArgs("testmem",NUMARG, myargs))
return 1;
/* load the sequence alphabets */
/* (and sequence parse trees) */
if (! SeqEntryLoad())
ErrShow();
/* open the ASN.1 input file in the right mode */
if ((aip = AsnIoOpen (myargs[0].strvalue, myargs[1].intvalue?"rb":"r"))
== NULL)
ErrShow();
sep = SeqEntryAsnRead(aip, NULL); /* read the entry */
AsnIoClose(aip);
SeqEntryPack(sep); /* pack it */
buf = MemNew(size); /* allocate a buffer */
aimp = AsnIoMemOpen("wb", buf, size); /* open to write asn1 to it */
SeqEntryAsnWrite(sep, aimp->aip, NULL); /* write it */
AsnIoFlush(aimp->aip); /* flush it */
count = aimp->count; /* record how many bytes in it */
AsnIoMemClose(aimp); /* close it */
SeqEntryFree(sep); /* release the object */
aimp = AsnIoMemOpen("rb", buf, count); /* open to read from buffer */
sep = SeqEntryAsnRead(aimp->aip, NULL); /* read it */
AsnIoMemClose(aimp); /* close it */
MemFree(buf); /* free the buffer */
/* open the output file */
aip = AsnIoOpen (myargs[2].strvalue, "w");
SeqEntryAsnWrite(sep, aip, NULL); /* print it */
AsnIoClose(aip);
SeqEntryFree(sep);
return(0);
}
static Boolean LoadObjPrtFromLocalString (CharPtr localStr)
{
Boolean retval = FALSE;
#ifndef WIN16
AsnIoMemPtr aimp;
aimp = AsnIoMemOpen ("r", (BytePtr) localStr, (Int4) StringLen (localStr));
if (aimp == NULL || aimp->aip == NULL) return FALSE;
retval = PrintTemplateSetAsnRead (aimp->aip);
AsnIoMemClose (aimp);
#endif
return retval;
}
static void s_TestIdFormatting(const char* s)
{
size_t len = strlen(s);
CObjectIStreamAsn ois(s, len);
CSeq_id cxx_id;
AsnIoMemPtr aimp = AsnIoMemOpen
(const_cast<char*>("r"),
reinterpret_cast<BytePtr>(const_cast<char*>(s)), len);
AsnIoPtr aip = AsnIoNew((ASNIO_IN | ASNIO_TEXT), NULL, aimp,
AsnIoMemRead, AsnIoMemWrite);
TAutoSeqId c_id;
ois.Read(&cxx_id, CSeq_id::GetTypeInfo(), CObjectIStream::eNoFileHeader);
aip->read_id = TRUE;
c_id = SeqIdAsnRead(aip, s_SeqIdATP);
BOOST_CHECK_EQUAL(s_IdLabel(c_id, eFastaShort),
s_IdLabel(cxx_id, eFastaShort));
BOOST_CHECK_EQUAL(s_IdLabel(c_id, eTextAccVer),
s_IdLabel(cxx_id, eTextAccVer));
BOOST_CHECK_EQUAL(s_IdLabel(c_id, eTextAccOnly),
s_IdLabel(cxx_id, eTextAccOnly));
BOOST_CHECK_EQUAL(s_IdLabel(c_id, eReport), s_IdLabel(cxx_id, eReport));
}
