예제 #1
0
파일: H5MF.c 프로젝트: MattNapsAlot/rHDF5
/*-------------------------------------------------------------------------
 * Function:    H5MF_alloc
 *
 * Purpose:     Allocate SIZE bytes of file memory and return the relative
 *		address where that contiguous chunk of file memory exists.
 *		The TYPE argument describes the purpose for which the storage
 *		is being requested.
 *
 * Return:      Success:        The file address of new chunk.
 *
 *              Failure:        HADDR_UNDEF
 *
 * Programmer:  Robb Matzke
 *              [email protected]
 *              Jul 11 1997
 *
 * Modifications:
 *		Robb Matzke, 1999-08-04
 *		Modified to work with the virtual file layer.
 *-------------------------------------------------------------------------
 */
haddr_t
H5MF_alloc(H5F_t *f, H5FD_mem_t type, hid_t dxpl_id, hsize_t size)
{
    haddr_t	ret_value;

    FUNC_ENTER_NOAPI(H5MF_alloc, HADDR_UNDEF);

    /* check arguments */
    assert(f);
    assert(size > 0);

    /* Fail if we don't have write access */
    if (0==(f->intent & H5F_ACC_RDWR))
	HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINIT, HADDR_UNDEF, "file is read-only");

    /* Check that the file can address the new space */
    if( H5MF_alloc_overflow(f, size) )
        HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, HADDR_UNDEF, "not enough address space in file");

    /* Allocate space from the virtual file layer */
    if (HADDR_UNDEF==(ret_value=H5FD_alloc(f->shared->lf, type, dxpl_id, size)))
        HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, HADDR_UNDEF, "file allocation failed");

    /* Convert absolute file address to relative file address */
    assert(ret_value>=f->shared->base_addr);

    /* Set return value */
    ret_value -= f->shared->base_addr;

done:
    FUNC_LEAVE_NOAPI(ret_value);
}
예제 #2
0
/*-------------------------------------------------------------------------
 * Function:    H5MF_aggr_alloc
 *
 * Purpose:     Try to allocate SIZE bytes of memory from an aggregator
 *              block if possible.
 *
 * Return:      Success:    The format address of the new file memory.
 *              Failure:    The undefined address HADDR_UNDEF
 *
 * Programmer:  Quincey Koziol
 *              Thursday, December 13, 2007
 *
 * Modifications:
 *	Vailin Choi, July 29th, 2008
 *	  The whole routine is modified to handle alignment
 *
 *-------------------------------------------------------------------------
 */
haddr_t
H5MF_aggr_alloc(H5F_t *f, hid_t dxpl_id, H5F_blk_aggr_t *aggr,
                H5F_blk_aggr_t *other_aggr, H5FD_mem_t type, hsize_t size)
{
    haddr_t 	ret_value;
    hsize_t 	alignment = 0, mis_align = 0;
    haddr_t	frag_addr = 0, eoa_frag_addr = 0;
    hsize_t	frag_size = 0, eoa_frag_size = 0;
    haddr_t	eoa = 0, new_space = 0;
    htri_t  	extended = 0;
    H5FD_mem_t 	alloc_type, other_alloc_type;

    FUNC_ENTER_NOAPI(H5MF_aggr_alloc, HADDR_UNDEF)
#ifdef H5MF_AGGR_DEBUG
    HDfprintf(stderr, "%s: type = %u, size = %Hu\n", FUNC, (unsigned)type, size);
#endif /* H5MF_AGGR_DEBUG */

    /* check args */
    HDassert(f);
    HDassert(aggr);
    HDassert(aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA || aggr->feature_flag == H5FD_FEAT_AGGREGATE_SMALLDATA);
    HDassert(other_aggr);
    HDassert(other_aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA || other_aggr->feature_flag == H5FD_FEAT_AGGREGATE_SMALLDATA);
    HDassert(other_aggr->feature_flag != aggr->feature_flag);
    HDassert(type >= H5FD_MEM_DEFAULT && type < H5FD_MEM_NTYPES);
    HDassert(size > 0);

    /*
     * If the aggregation feature is enabled for this file, allocate "generic"
     * space and sub-allocate out of that, if possible. Otherwise just allocate
     * through H5FD_alloc()
     */
    if(f->shared->feature_flags & aggr->feature_flag) {
#ifdef H5MF_AGGR_DEBUG
        HDfprintf(stderr, "%s: aggr = {%a, %Hu, %Hu}\n", FUNC, aggr->addr, aggr->tot_size, aggr->size);
#endif /* H5MF_AGGR_DEBUG */

        alignment = f->shared->alignment;
        if (!((alignment > 1) && (size >= f->shared->threshold)))
            alignment = 0; /* no alignment */

        if (alignment && aggr->addr > 0 && aggr->size > 0 && (mis_align = aggr->addr % alignment)) {
            frag_addr = aggr->addr;
            frag_size = alignment - mis_align;
        }

        if (HADDR_UNDEF == (eoa = H5F_get_eoa(f, type)))
            HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, HADDR_UNDEF, "Unable to get eoa")

            alloc_type = aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA ? H5FD_MEM_DEFAULT : H5FD_MEM_DRAW;
        other_alloc_type = other_aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA ? H5FD_MEM_DEFAULT : H5FD_MEM_DRAW;

        /* Check if the space requested is larger than the space left in the block */
        if((size + frag_size) > aggr->size) {

            /* Check if the block asked for is too large for 'normal' aggregator block */
            if(size >= aggr->alloc_size) {

                hsize_t ext_size = size + frag_size;

                if ((aggr->addr > 0) && (extended=H5FD_try_extend(f->shared->lf, alloc_type, aggr->addr + aggr->size, ext_size)) < 0)
                    HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, HADDR_UNDEF, "can't extending space")
                    else if (extended) {
                        /* aggr->size is unchanged */
                        ret_value = aggr->addr + frag_size;
                        aggr->addr += ext_size;
                        aggr->tot_size += ext_size;
                    } else {
                        if ((other_aggr->size > 0) && (H5F_addr_eq((other_aggr->addr + other_aggr->size), eoa)) &&
                                ((other_aggr->tot_size - other_aggr->size) >= other_aggr->alloc_size)) {

                            if(H5FD_free(f->shared->lf, dxpl_id, other_alloc_type, other_aggr->addr, other_aggr->size) < 0)
                                HGOTO_ERROR(H5E_VFL, H5E_CANTFREE, HADDR_UNDEF, "can't free aggregation block")

                                other_aggr->addr = 0;
                            other_aggr->tot_size = 0;
                            other_aggr->size = 0;
                        }

                        if(HADDR_UNDEF == (new_space = H5FD_alloc(f->shared->lf, dxpl_id, type, size, &eoa_frag_addr, &eoa_frag_size)))
                            HGOTO_ERROR(H5E_VFL, H5E_CANTALLOC, HADDR_UNDEF, "can't allocate aggregation block")

                            /* Use the new space allocated, leaving the old block */
                            ret_value = new_space;
                    } /* end else */
            } /* end if */
            else {
예제 #3
0
/*-------------------------------------------------------------------------
 * Function:    H5MF_aggr_alloc
 *
 * Purpose:     Try to allocate SIZE bytes of memory from an aggregator
 *              block if possible.
 *
 * Return:      Success:    The format address of the new file memory.
 *              Failure:    The undefined address HADDR_UNDEF
 *
 * Programmer:  Quincey Koziol
 *              Thursday, December 13, 2007
 *
 *-------------------------------------------------------------------------
 */
haddr_t
H5MF_aggr_alloc(H5F_t *f, hid_t dxpl_id, H5F_blk_aggr_t *aggr,
    H5F_blk_aggr_t *other_aggr, H5FD_mem_t type, hsize_t size)
{
    haddr_t	eoa_frag_addr = HADDR_UNDEF;    /* Address of fragment at EOA */
    hsize_t	eoa_frag_size = 0;      /* Size of fragment at EOA */
    haddr_t	eoa = HADDR_UNDEF;      /* Initial EOA for the file */
    haddr_t 	ret_value;              /* Return value */

    FUNC_ENTER_NOAPI(HADDR_UNDEF)
#ifdef H5MF_AGGR_DEBUG
HDfprintf(stderr, "%s: type = %u, size = %Hu\n", FUNC, (unsigned)type, size);
#endif /* H5MF_AGGR_DEBUG */

    /* check args */
    HDassert(f);
    HDassert(aggr);
    HDassert(aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA || aggr->feature_flag == H5FD_FEAT_AGGREGATE_SMALLDATA);
    HDassert(other_aggr);
    HDassert(other_aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA || other_aggr->feature_flag == H5FD_FEAT_AGGREGATE_SMALLDATA);
    HDassert(other_aggr->feature_flag != aggr->feature_flag);
    HDassert(type >= H5FD_MEM_DEFAULT && type < H5FD_MEM_NTYPES);
    HDassert(size > 0);

    /* Get the EOA for the file */
    if(HADDR_UNDEF == (eoa = H5F_get_eoa(f, type)))
        HGOTO_ERROR(H5E_RESOURCE, H5E_CANTGET, HADDR_UNDEF, "Unable to get eoa")

    /*
     * If the aggregation feature is enabled for this file and strategy is not H5F_FILE_SPACE_VFD,
     * allocate "generic" space and sub-allocate out of that, if possible.
     * Otherwise just allocate through H5FD_alloc().
     */
    if((f->shared->feature_flags & aggr->feature_flag) && f->shared->fs_strategy != H5F_FILE_SPACE_VFD) {
        haddr_t	aggr_frag_addr = HADDR_UNDEF;   /* Address of aggregrator fragment */
        hsize_t	aggr_frag_size = 0;             /* Size of aggregator fragment */
        hsize_t alignment;                      /* Alignment of this section */
        hsize_t aggr_mis_align = 0;             /* Mis-alignment of aggregator */
        H5FD_mem_t alloc_type, other_alloc_type;/* Current aggregator & 'other' aggregator types */

#ifdef H5MF_AGGR_DEBUG
HDfprintf(stderr, "%s: aggr = {%a, %Hu, %Hu}\n", FUNC, aggr->addr, aggr->tot_size, aggr->size);
#endif /* H5MF_AGGR_DEBUG */

        /* Turn off alignment if allocation < threshold */
	alignment = f->shared->alignment;
	if(!((alignment > 1) && (size >= f->shared->threshold)))
	    alignment = 0; /* no alignment */

        /* Generate fragment if aggregator is mis-aligned */
	if(alignment && aggr->addr > 0 && aggr->size > 0 && (aggr_mis_align = (aggr->addr + H5FD_get_base_addr(f->shared->lf)) % alignment)) {
	    aggr_frag_addr = aggr->addr;
	    aggr_frag_size = alignment - aggr_mis_align;
	} /* end if */

	alloc_type = aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA ? H5FD_MEM_DEFAULT : H5FD_MEM_DRAW;
	other_alloc_type = other_aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA ? H5FD_MEM_DEFAULT : H5FD_MEM_DRAW;

        /* Check if the space requested is larger than the space left in the block */
        if((size + aggr_frag_size) > aggr->size) {
            htri_t  	was_extended = FALSE;   /* Whether the file was extended */

            /* Check if the block asked for is too large for 'normal' aggregator block */
            if(size >= aggr->alloc_size) {
		hsize_t ext_size = size + aggr_frag_size;

                /* Check for overlapping into file's temporary allocation space */
                if(H5F_addr_gt((aggr->addr + aggr->size + ext_size), f->shared->tmp_addr))
                    HGOTO_ERROR(H5E_RESOURCE, H5E_BADRANGE, HADDR_UNDEF, "'normal' file space allocation request will overlap into 'temporary' file space")

		if ((aggr->addr > 0) && (was_extended = H5FD_try_extend(f->shared->lf, alloc_type, f, aggr->addr + aggr->size, ext_size)) < 0)
		    HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, HADDR_UNDEF, "can't extending space")
		else if (was_extended) {
		    /* aggr->size is unchanged */
		    ret_value = aggr->addr + aggr_frag_size;
		    aggr->addr += ext_size;
		    aggr->tot_size += ext_size;
		} else {
                    /* Check for overlapping into file's temporary allocation space */
                    if(H5F_addr_gt((eoa + size), f->shared->tmp_addr))
                        HGOTO_ERROR(H5E_RESOURCE, H5E_BADRANGE, HADDR_UNDEF, "'normal' file space allocation request will overlap into 'temporary' file space")

                    /* Release "other" aggregator, if it exists, is at the end of the allocated space,
                     * has allocated more than one block and the unallocated space is greater than its
                     * allocation block size.
                     */
		    if ((other_aggr->size > 0) && (H5F_addr_eq((other_aggr->addr + other_aggr->size), eoa)) &&
			(other_aggr->tot_size > other_aggr->size) && ((other_aggr->tot_size - other_aggr->size) >= other_aggr->alloc_size)) {
                            if(H5MF_aggr_free(f, dxpl_id, other_alloc_type, other_aggr) < 0)
                                HGOTO_ERROR(H5E_RESOURCE, H5E_CANTFREE, HADDR_UNDEF, "can't free aggregation block")
		    } /* end if */

                    /* Allocate space from the VFD (i.e. at the end of the file) */
		    if(HADDR_UNDEF == (ret_value = H5FD_alloc(f->shared->lf, dxpl_id, alloc_type, f, size, &eoa_frag_addr, &eoa_frag_size)))
			HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, HADDR_UNDEF, "can't allocate aggregation block")
                } /* end else */
            } /* end if */
예제 #4
0
    /* Check whether the file can use temporary addresses */
    if(f->shared->use_tmp_space) {
        haddr_t	eoa;            /* Current EOA for the file */

        /* Get the EOA for the file */
        if(HADDR_UNDEF == (eoa = H5F_get_eoa(f, type)))
            HGOTO_ERROR(H5E_FILE, H5E_CANTGET, HADDR_UNDEF, "Unable to get eoa")

        /* Check for overlapping into file's temporary allocation space */
        if(H5F_addr_gt((eoa + size), f->shared->tmp_addr))
            HGOTO_ERROR(H5E_FILE, H5E_BADRANGE, HADDR_UNDEF, "'normal' file space allocation request will overlap into 'temporary' file space")
    } /* end if */

    /* Call the file driver 'alloc' routine */
    ret_value = H5FD_alloc(f->shared->lf, type, f, size, frag_addr, frag_size);
    if(!H5F_addr_defined(ret_value))
        HGOTO_ERROR(H5E_FILE, H5E_CANTALLOC, HADDR_UNDEF, "file driver 'alloc' request failed")

    /* Mark EOA dirty */
    if(H5F_eoa_dirty(f) < 0)
        HGOTO_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, HADDR_UNDEF, "unable to mark EOA as dirty")

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__alloc() */


/*-------------------------------------------------------------------------
 * Function:    H5F__free
 *