static rc_t SpotGroupSplitterFactory_Make( const SRASplitterFactory** cself,
const SRATable* table, bool split, char* const spot_group[] )
{
rc_t rc = 0;
SpotGroupSplitterFactory* obj = NULL;
if ( cself == NULL || table == NULL )
{
rc = RC( rcSRA, rcType, rcAllocating, rcParam, rcNull );
}
else
{
rc = SRASplitterFactory_Make( cself, eSplitterSpot, sizeof( *obj ),
SpotGroupSplitterFactory_Init,
SpotGroupSplitterFactory_NewObj,
SpotGroupSplitterFactory_Release );
if ( rc == 0 )
{
obj = ( SpotGroupSplitterFactory* ) *cself;
obj->table = table;
obj->split = split;
obj->spot_group = spot_group;
}
}
return rc;
}
static rc_t ReadFilterSplitterFactory_Make( const SRASplitterFactory** cself,
const SRATable* table, SRAReadFilter read_filter )
{
rc_t rc = 0;
ReadFilterSplitterFactory* obj = NULL;
if ( cself == NULL || table == NULL )
{
rc = RC( rcSRA, rcType, rcAllocating, rcParam, rcNull );
}
else
{
rc = SRASplitterFactory_Make( cself, eSplitterRead, sizeof( *obj ),
ReadFilterSplitterFactory_Init,
ReadFilterSplitterFactory_NewObj,
ReadFilterSplitterFactory_Release );
if ( rc == 0 )
{
obj = ( ReadFilterSplitterFactory* ) *cself;
obj->table = table;
obj->read_filter = read_filter;
}
}
return rc;
}
static
rc_t IlluminaU32SplitterFactory_Make(const SRASplitterFactory** cself, const char* accession, const SRATable* table, TIlluminaLaneSplitterType type)
{
rc_t rc = 0;
IlluminaU32SplitterFactory* obj = NULL;
if( cself == NULL || accession == NULL || table == NULL ) {
rc = RC(rcSRA, rcType, rcConstructing, rcParam, rcNull);
} else if( (rc = SRASplitterFactory_Make(cself, eSplitterSpot, sizeof(*obj),
IlluminaU32SplitterFactory_Init,
IlluminaU32SplitterFactory_NewObj,
IlluminaU32SplitterFactory_Release)) == 0 ) {
obj = (IlluminaU32SplitterFactory*)*cself;
obj->accession = accession;
obj->table = table;
switch(type) {
case eIlluminaLaneSplitter:
case eIlluminaTileSplitter:
obj->type = type;
break;
default:
rc = RC(rcSRA, rcType, rcConstructing, rcParam, rcInvalid);
}
}
return rc;
}
static
rc_t Absolid2BioFilterFactory_Make(const SRASplitterFactory** cself, const char* accession, const SRATable* table)
{
rc_t rc = 0;
Absolid2BioFilterFactory* obj = NULL;
if( cself == NULL || accession == NULL || table == NULL ) {
rc = RC(rcExe, rcType, rcConstructing, rcParam, rcNull);
} else if( (rc = SRASplitterFactory_Make(cself, eSplitterSpot, sizeof(*obj),
Absolid2BioFilterFactory_Init,
Absolid2BioFilterFactory_NewObj,
Absolid2BioFilterFactory_Release)) == 0 ) {
obj = (Absolid2BioFilterFactory*)*cself;
obj->accession = accession;
obj->table = table;
}
return rc;
}
static rc_t MaxNReadsValidatorFactory_Make( const SRASplitterFactory** cself, const SRATable* table )
{
rc_t rc = 0;
MaxNReadsValidatorFactory* obj = NULL;
if( cself == NULL || table == NULL )
{
rc = RC( rcSRA, rcType, rcAllocating, rcParam, rcNull );
}
else
{
rc = SRASplitterFactory_Make( cself, eSplitterSpot, sizeof( *obj ),
MaxNReadsValidatorFactory_Init,
MaxNReadsValidatorFactory_NewObj,
MaxNReadsValidatorFactory_Release);
if ( rc == 0 )
{
obj = ( MaxNReadsValidatorFactory* )*cself;
obj->table = table;
}
}
return rc;
}
