static void aswClose(struct annoStreamer **pVSelf)
/* Free wiggleDataStream and self. */
{
if (pVSelf == NULL)
return;
struct annoStreamWig *self = *(struct annoStreamWig **)pVSelf;
udcFileClose(&(self->wibFH));
freeMem(self->wibFile);
annoStreamerFree(pVSelf);
}
static void astClose(struct annoStreamer **pVSelf)
/* Close file and free self. */
{
if (pVSelf == NULL)
return;
struct annoStreamTab *self = *(struct annoStreamTab **)pVSelf;
lineFileClose(&(self->lf));
freeMem(self->asWords);
freeMem(self->fileOrUrl);
annoStreamerFree(pVSelf);
}
static void asbwClose(struct annoStreamer **pVSelf)
/* Close bbi handle and free self. */
{
if (pVSelf == NULL)
return;
struct annoStreamBigWig *self = *(struct annoStreamBigWig **)pVSelf;
bigWigFileClose(&(self->bbi));
self->intervalList = NULL;
lmCleanup(&(self->intervalQueryLm));
annoStreamerFree(pVSelf);
}
static void asvClose(struct annoStreamer **pVSelf)
/* Close VCF file and free self. */
{
if (pVSelf == NULL)
return;
struct annoStreamVcf *self = *(struct annoStreamVcf **)pVSelf;
vcfFileFree(&(self->vcff));
// Don't free self->record -- currently it belongs to vcff's localMem
dyStringFree(&(self->dyGt));
annoStreamerFree(pVSelf);
}
static void asdClose(struct annoStreamer **pVSelf)
/* Close db connection and free self. */
{
if (pVSelf == NULL)
return;
struct annoStreamDb *self = *(struct annoStreamDb **)pVSelf;
lmCleanup(&(self->qLm));
freeMem(self->table);
sqlFreeResult(&(self->sr));
hFreeConn(&(self->conn));
annoStreamerFree(pVSelf);
}
