void block_setRootInstance(Block *block, Segment *segment) { block = block_getPositiveOrientation(block); segment = segment_getPositiveOrientation(segment); assert(block_getInstance(block, segment_getName(segment)) == segment); end_setRootInstance(block_get5End(block), segment_get5Cap(segment)); end_setRootInstance(block_get3End(block), segment_get3Cap(segment)); }
void block_check(Block *block) { //Check is connected to flower properly cactusCheck(flower_getBlock(block_getFlower(block), block_getName(block)) == block_getPositiveOrientation(block)); //Check we have actually set built blocks for the flower.. cactusCheck(flower_builtBlocks(block_getFlower(block))); //Checks the two ends are block ends. End *_5End = block_get5End(block); End *_3End = block_get3End(block); cactusCheck(end_isBlockEnd(_5End)); cactusCheck(end_isBlockEnd(_3End)); cactusCheck(end_getOrientation(_5End) == block_getOrientation(block)); cactusCheck(end_getOrientation(_3End) == block_getOrientation(block)); cactusCheck(end_getBlock(_5End) == block); cactusCheck(end_getBlock(_3End) == block); cactusCheck(end_getSide(_5End)); //Check the sides of the ends are consistent. cactusCheck(!end_getSide(_3End)); cactusCheck(block_getLength(block) > 0); //check block has non-zero length //Check reverse Block *rBlock = block_getReverse(block); cactusCheck(rBlock != NULL); cactusCheck(block_getReverse(block) == rBlock); cactusCheck(block_getOrientation(block) == !block_getOrientation(rBlock)); cactusCheck(block_getLength(block) == block_getLength(rBlock)); cactusCheck(block_get5End(block) == end_getReverse(block_get3End(rBlock))); cactusCheck(block_get3End(block) == end_getReverse(block_get5End(rBlock))); cactusCheck(block_getInstanceNumber(block) == block_getInstanceNumber(rBlock)); if(block_getInstanceNumber(block) > 0) { cactusCheck(block_getFirst(block) == segment_getReverse(block_getFirst(rBlock))); if(block_getRootInstance(block) == NULL) { cactusCheck(block_getRootInstance(rBlock) == NULL); } else { cactusCheck(block_getRootInstance(block) == segment_getReverse(block_getRootInstance(rBlock))); } } //For each segment calls segment_check. Block_InstanceIterator *iterator = block_getInstanceIterator(block); Segment *segment; while((segment = block_getNext(iterator)) != NULL) { segment_check(segment); } block_destructInstanceIterator(iterator); }
void flower_removeBlock(Flower *flower, Block *block) { block = block_getPositiveOrientation(block); assert(stSortedSet_search(flower->blocks, block) != NULL); stSortedSet_remove(flower->blocks, block); }
void flower_addBlock(Flower *flower, Block *block) { block = block_getPositiveOrientation(block); assert(stSortedSet_search(flower->blocks, block) == NULL); stSortedSet_insert(flower->blocks, block); }