void hoc_construct_point(Object* ob, int narg) {
if (skip_) {
//printf("skipped hoc_construct_point\n");
return;
}
//printf("%s is a pointprocess\n", hoc_object_name(ob));
int type = ob->ctemplate->symtable->last->subtype;
int ptype = pnt_map[type];
Point_process* pnt = (Point_process*)create_point_process(ptype, ob);
ob->u.dataspace[ob->ctemplate->dataspace_size - 1]._pvoid = (void*)pnt;
assert(last_created_pp_ob_ == nil);
last_created_pp_ob_ = ob;
if (narg > 0) {
double x = hoc_look_inside_stack(narg-1, NUMBER)->val;
//printf("x=%g\n", x);
Section* sec = chk_access();
Node* nd = node_exact(sec, x);
//printf("ptype=%d pnt=%lx %s nd=%lx\n", ptype, (long)pnt, secname(sec), (long)nd);
//printf("type=%d pointsym=%lx\n", type, pointsym[ptype]);
//printf("type=%d from pointsym %s = %d\n", type, pointsym[ptype]->name,
//pointsym[ptype]->subtype);
nrn_loc_point_process(ptype, pnt, sec, nd);
}
}
boolean special_pnt_call(Object* ob, Symbol* sym, int narg) {
char* name = sym->name;
if (strcmp(name, "loc") == 0) {
int type = ob->ctemplate->symtable->last->subtype;
int ptype = pnt_map[type];
if (narg != 1) {
hoc_execerror("no argument", 0);
}
double x = hoc_look_inside_stack(narg-1, NUMBER)->val;
Section* sec = chk_access();
Node* node = node_exact(sec, x);
nrn_loc_point_process(ptype, ob2pntproc(ob), sec, node);
hoc_pushx(x);
return true;
}else if (strcmp(name, "has_loc") == 0) {
Point_process* p = ob2pntproc(ob);
hoc_pushx(double(p != nil && p->sec != nil));
return true;
}else if (strcmp(name, "get_loc") == 0) {
hoc_pushx(get_loc_point_process(ob2pntproc(ob)));
return true;
}else{
return false;
}
}
psection()
{
Section *sec;
Prop *p, *p1;
sec = chk_access();
p = sec->prop;
Printf("%s {", secname(sec));
Printf(" nseg=%d L=%g Ra=%g", sec->nnode - 1, section_length(sec),
nrn_ra(sec));
if (p->dparam[4].val != 1) {
Printf(" rallbranch=%g", p->dparam[4].val);
}
Printf("\n");
if (sec->parentsec) {
Printf(" %s ",secname(sec->parentsec));
Printf("connect %s (%g), %g\n", secname(sec),
p->dparam[3].val, p->dparam[1].val);
} else {
v_setup_vectors();
/*SUPPRESS 440*/
Printf(" /*location %g attached to cell %d*/\n",
p->dparam[3].val, sec->parentnode->v_node_index);
}
if (sec->nnode) {
/*SUPPRESS 440*/
Printf(" /* First segment only */\n");
p1 = sec->pnode[0]->prop;
pnode(p1);
}
Printf("}\n");
ret(1.);
}
void LinearMechanism::create()
{
int i;
lmfree();
i = 0;
Object* o = *hoc_objgetarg(++i);
if (strcmp(o->ctemplate->sym->name, "PythonObject") == 0) {
f_callable_ = o;
hoc_obj_ref(o);
c_ = matrix_arg(++i);
} else {
f_callable_ = NULL;
c_ = matrix_arg(1);
}
g_ = matrix_arg(++i);
y_ = vector_arg(++i);
if (ifarg(i + 2) && hoc_is_object_arg(i + 2) && is_vector_arg(i + 2)) {
y0_ = vector_arg(++i);
}
b_ = vector_arg(++i);
if (ifarg(++i)) {
#if HAVE_IV
Oc oc;
#endif
if (hoc_is_double_arg(i)) {
nnode_ = 1;
nodes_ = new Node*[1];
double x = chkarg(i, 0., 1.);
Section* sec = chk_access();
nodes_[0] = node_exact(sec, x);
nrn_notify_when_double_freed(&NODEV(nodes_[0]), this);
}else{
Object* o = *hoc_objgetarg(i);
check_obj_type(o, "SectionList");
SectionList* sl = new SectionList(o);
sl->ref();
Vect* x = vector_arg(i+1);
Section* sec;
nnode_ = 0;
nodes_ = new Node*[x->capacity()];
for (sec = sl->begin(); sec; sec = sl->next()) {
nodes_[nnode_] = node_exact(sec, x->elem(nnode_));
nrn_notify_when_double_freed(&NODEV(nodes_[nnode_]), this);
++nnode_;
}
if (ifarg(i+2)) {
elayer_ = vector_arg(i+2);
}
sl->unref();
}
}
model_ = new LinearModelAddition(c_, g_, y_, y0_, b_,
nnode_, nodes_, elayer_, f_callable_);
}
PyObject* nrnpy_cas(PyObject* self, PyObject* args) {
Section* sec = chk_access();
//printf("nrnpy_cas %s\n", secname(sec));
section_ref(sec);
NPySecObj* pysec = NULL;
if (sec->prop->dparam[PROP_PY_INDEX]._pvoid) {
pysec = (NPySecObj*)sec->prop->dparam[PROP_PY_INDEX]._pvoid;
Py_INCREF(pysec);
assert(pysec->sec_ == sec);
}else{
pysec = (NPySecObj*)psection_type->tp_alloc(psection_type, 0);
pysec->sec_ = sec;
pysec->name_ = 0;
pysec->cell_ = 0;
}
return (PyObject*)pysec;
}
fmatrix() {
if (ifarg(1)) {
extern Node* node_exact(Section*, double);
double x = chkarg(1, 0., 1.);
int id = (int)chkarg(2, 1., 4.);
Node* nd = node_exact(chk_access(), x);
NrnThread* _nt = nd->_nt;
switch (id) {
case 1: ret(NODEA(nd)); break;
case 2: ret(NODED(nd)); break;
case 3: ret(NODEB(nd)); break;
case 4: ret(NODERHS(nd)); break;
}
return;
}
nrn_print_matrix(nrn_threads);
ret(1.);
}
fsyn() {
int i;
if (nrn_nthread > 1) {
hoc_execerror("fsyn does not allow threads", "");
}
i = chkarg(1, 0., 10000.);
if (ifarg(2)) {
if (i >= maxstim) {
hoc_execerror("index out of range", (char *)0);
}
pstim[i].loc = chkarg(2, 0., 1.);
pstim[i].delay = chkarg(3, 0., 1e21);
pstim[i].duration = chkarg(4, 0., 1e21);
pstim[i].mag = *getarg(5);
pstim[i].erev = *getarg(6);
pstim[i].sec = chk_access();
section_ref(pstim[i].sec);
stim_record(i);
} else {
free_syn();
maxstim = i;
if (maxstim) {
pstim = (Stimulus *)emalloc((unsigned)(maxstim * sizeof(Stimulus)));
}
for (i = 0; i<maxstim; i++) {
pstim[i].loc = 0;
pstim[i].mag = 0.;
pstim[i].delay = 1e20;
pstim[i].duration = 0.;
pstim[i].erev = 0.;
pstim[i].sec = 0;
stim_record(i);
}
}
ret(0.);
}
static int
e3(void)
{
int p1;
register unsigned char *a;
unsigned char *p2;
long long ll_1, ll_2;
a = nxtarg(0);
if (eq(a, "("))
{
p1 = sexp();
if (!eq(nxtarg(0), ")"))
failed("test",") expected");
return(p1);
}
p2 = nxtarg(1);
ap--;
if ((p2 == 0) || (!eq(p2, "=") && !eq(p2, "!=")))
{
if (eq(a, "-r"))
return(chk_access(nxtarg(0), S_IREAD, 0) == 0);
if (eq(a, "-w"))
return(chk_access(nxtarg(0), S_IWRITE, 0) == 0);
if (eq(a, "-x"))
return(chk_access(nxtarg(0), S_IEXEC, 0) == 0);
#ifdef SUS
if (eq(a, "-e"))
return(access(nxtarg(0), F_OK) == 0);
if (eq(a, "-S"))
return(filtyp(nxtarg(0), S_IFSOCK));
if (eq(a, "!"))
return(!e3());
#endif /* SUS */
if (eq(a, "-d"))
return(filtyp(nxtarg(0), S_IFDIR));
if (eq(a, "-c"))
return(filtyp(nxtarg(0), S_IFCHR));
if (eq(a, "-b"))
return(filtyp(nxtarg(0), S_IFBLK));
if (eq(a, "-f"))
if (ucb_builtins) {
struct stat statb;
return(stat((char *)nxtarg(0), &statb) >= 0 &&
(statb.st_mode & S_IFMT) != S_IFDIR);
}
else
return(filtyp(nxtarg(0), S_IFREG));
if (eq(a, "-u"))
return(ftype(nxtarg(0), S_ISUID));
if (eq(a, "-g"))
return(ftype(nxtarg(0), S_ISGID));
if (eq(a, "-k"))
return(ftype(nxtarg(0), S_ISVTX));
if (eq(a, "-p"))
return(filtyp(nxtarg(0), S_IFIFO));
if (eq(a, "-h") || eq(a, "-L"))
return(filtyp(nxtarg(0), S_IFLNK));
if (eq(a, "-s"))
return(fsizep(nxtarg(0)));
if (eq(a, "-t"))
{
if (ap >= ac) /* no args */
return(isatty(1));
else if (eq((a = nxtarg(0)), "-a") || eq(a, "-o"))
{
ap--;
return(isatty(1));
}
else
return(isatty(atoi((char *)a)));
}
if (eq(a, "-n"))
return(!eq(nxtarg(0), ""));
if (eq(a, "-z"))
return(eq(nxtarg(0), ""));
}
p2 = nxtarg(1);
if (p2 == 0)
return(!eq(a, ""));
if (eq(p2, "-a") || eq(p2, "-o"))
{
ap--;
return(!eq(a, ""));
}
if (eq(p2, "="))
return(eq(nxtarg(0), a));
if (eq(p2, "!="))
return(!eq(nxtarg(0), a));
ll_1 = stoifll(a);
ll_2 = stoifll(nxtarg(0));
if (eq(p2, "-eq"))
return (ll_1 == ll_2);
if (eq(p2, "-ne"))
return (ll_1 != ll_2);
if (eq(p2, "-gt"))
return (ll_1 > ll_2);
if (eq(p2, "-lt"))
return (ll_1 < ll_2);
if (eq(p2, "-ge"))
return (ll_1 >= ll_2);
if (eq(p2, "-le"))
return (ll_1 <= ll_2);
bfailed(btest, badop, p2);
/* NOTREACHED */
return 0;
}
void nrn_vecsim_add(void* v, boolean record) {
IvocVect* yvec, *tvec, *dvec;
extern short* nrn_is_artificial_;
double* pvar = nil;
char* s = nil;
double ddt;
Object* ppobj = nil;
int iarg = 0;
yvec = (IvocVect*)v;
if (hoc_is_object_arg(1)) {
iarg = 1;
ppobj = *hoc_objgetarg(1);
if (!ppobj || ppobj->ctemplate->is_point_ <= 0
|| nrn_is_artificial_[ob2pntproc(ppobj)->prop->type]
) {
hoc_execerror("Optional first arg is not a POINT_PROCESS", 0);
}
}
if (record == false && hoc_is_str_arg(iarg+1)) {//statement involving $1
// Vector.play("proced($1)", ...)
s = gargstr(iarg+1);
}else if (record == false && hoc_is_double_arg(iarg+1)) {// play that element
// Vector.play(index)
// must be a VecPlayStep and nothing else
VecPlayStep* vps = (VecPlayStep*)net_cvode_instance->playrec_uses(v);
if (vps) {
int j = (int)chkarg(iarg+1, 0., yvec->capacity()-1);
if (vps->si_) {
vps->si_->play_one(yvec->elem(j));
}
}
return;
}else{
// Vector.play(&SEClamp[0].amp1, ...)
// Vector.record(&SEClamp[0].i, ...)
pvar = hoc_pgetarg(iarg+1);
}
tvec = nil;
dvec = nil;
ddt = -1.;
int con = 0;
if (ifarg(iarg+2)) {
if (hoc_is_object_arg(iarg+2)) {
// Vector...(..., tvec)
tvec = vector_arg(iarg+2);
}else{
// Vector...(..., Dt)
ddt = chkarg(iarg+2, 1e-9, 1e10);
}
if (ifarg(iarg+3)) {
if (hoc_is_double_arg(iarg+3)) {
con = (int)chkarg(iarg+3, 0., 1.);
}else{
dvec = vector_arg(iarg+3);
con = 1;
}
}
}
// tvec can be used for many record/play items
// if (tvec) { nrn_vecsim_remove(tvec); }
if (record) {
// yvec can be used only for one record (but many play)
if (yvec) { nrn_vecsim_remove(yvec); }
if (tvec) {
new VecRecordDiscrete(pvar, yvec, tvec, ppobj);
} else if (ddt > 0.) {
new VecRecordDt(pvar, yvec, ddt, ppobj);
} else if (pvar == &t) {
new TvecRecord(chk_access(), yvec, ppobj);
} else {
new YvecRecord(pvar, yvec, ppobj);
}
}else{
if (con) {
if (s) {
new VecPlayContinuous(s, yvec, tvec, dvec, ppobj);
}else{
new VecPlayContinuous(pvar, yvec, tvec, dvec, ppobj);
}
}else{
if (!tvec && ddt == -1.) {
chkarg(iarg+2, 1e-9, 1e10);
}
if (s) {
new VecPlayStep(s, yvec, tvec, ddt, ppobj);
}else{
new VecPlayStep(pvar, yvec, tvec, ddt, ppobj);
}
}
}
}
VecPlayContinuous::VecPlayContinuous(const char* s, IvocVect* y, IvocVect* t, IvocVect* discon, Object* ppobj) : PlayRecord(&NODEV(chk_access()->pnode[0]), ppobj) {
//printf("VecPlayContinuous\n");
init(y, t, discon);
si_ = new StmtInfo(s);
}
VecPlayStep::VecPlayStep(const char* s, IvocVect* y, IvocVect* t, double dt, Object* ppobj) : PlayRecord(&NODEV(chk_access()->pnode[0]), ppobj) {
//printf("VecPlayStep\n");
init(y, t, dt);
si_ = new StmtInfo(s);
}
