static void
autocal2d(float *a, int rn, int cn,
float *fg, float *bg, int nlevels, float *levels,
float *x1, float *x2, float *y1, float *y2,
float *tr)
{
float dx1, dx2, dy1, dy2;
/* autocalibrate intensity-range. */
if (*fg == *bg) {
minmax(a,rn*cn,bg,fg);
/* fprintf(stderr,"Intensity range:\n fg=%f\n bg=%f\n",*fg,*bg); */
}
if ((nlevels >= 2) && (levels))
lininterp(*bg, *fg, nlevels, levels);
/* autocalibrate x-y range. */
if ((*x1 == *x2) || (*y1 == *y2)) cpgqwin(&dx1,&dx2,&dy1,&dy2);
if (*x1 == *x2) {*x1=dx1; *x2=dx2;}
if (*y1 == *y2) {*y1=dy1; *y2=dy2;}
/* fprintf(stderr,"Xrange: [%f, %f]\nYrange[%f, %f]\n",*x1,*x2,*y1,*y2); */
/* calculate transformation vector. */
tr[2] = tr[4] = 0.0;
tr[1] = (*x2 - *x1) / cn;
tr[0] = *x1 - (tr[1] / 2);
tr[5] = (*y2 - *y1) / rn;
tr[3] = *y1 - (tr[5] / 2);
/* fprintf(stderr,"Tansformation vector:\n"); */
/* for (i=0; i<6; fprintf(stderr," tr[%d]=%f\n",i,tr[i]),i++); */
}
float deletePoint(pulsar *psr,int npsr,float *x,float *y,float mouseX,float mouseY)
{
int i,iclosest,count;
float closest,x1,x2,x3,x4,y1,y2,y3,y4,xscale,yscale,xpos,ypos;
cpgqvp(3,&x1,&x2,&y1,&y2);
cpgqwin(&x3,&x4,&y3,&y4);
xscale = (x2-x1)/(x4-x3);
yscale = (y2-y1)/(y4-y3);
mouseX = (mouseX-x3)*xscale;
mouseY = (mouseY-y3)*yscale;
iclosest=-1;
count=0;
for (i=0;i<psr[0].nobs;i++)
{
if (psr[0].obsn[i].deleted==0)
{
xpos = (x[count]-x3)*xscale;
ypos = (y[count]-y3)*yscale;
count++;
if (iclosest==-1)
{
iclosest=i;
closest = pow(xpos-mouseX,2)+pow(ypos-mouseY,2);
}
else if (pow(xpos-mouseX,2)+pow(ypos-mouseY,2)<closest)
{
iclosest=i;
closest = pow(xpos-mouseX,2)+pow(ypos-mouseY,2);
}
}
}
psr[0].obsn[iclosest].deleted=1;
return closest;
}
static void _pgqwin (void)
{
float x1, x2, y_1, y2;
cpgqwin (&x1, &x2, &y_1, &y2);
(void) push_4_doubles (x1, x2, y_1, y2);
}
/*
* Class: pulsarhunter_PgplotInterface
* Method: pgqwin
* Signature: ([F)V
*/
JNIEXPORT void JNICALL Java_pulsarhunter_PgplotInterface_pgqwin
(JNIEnv *env, jclass cl, jfloatArray retVal){
jfloat* retValArr = (*env)->GetFloatArrayElements(env,retVal,0);
cpgqwin(retValArr,retValArr+1,retValArr+2,retValArr+3);
(*env)->ReleaseFloatArrayElements(env,retVal,retValArr,0);
}
float idPoint(pulsar *psr,int npsr,float *x,float *y,float mouseX,float mouseY)
{
int i,iclosest,count;
float closest,x1,x2,x3,x4,y1,y2,y3,y4,xscale,yscale,xpos,ypos;
cpgqvp(3,&x1,&x2,&y1,&y2);
cpgqwin(&x3,&x4,&y3,&y4);
xscale = (x2-x1)/(x4-x3);
yscale = (y2-y1)/(y4-y3);
mouseX = (mouseX-x3)*xscale;
mouseY = (mouseY-y3)*yscale;
iclosest=-1;
count=0;
for (i=0;i<psr[0].nobs;i++)
{
if (psr[0].obsn[i].deleted==0)
{
xpos = (x[count]-x3)*xscale;
ypos = (y[count]-y3)*yscale;
count++;
if (iclosest==-1)
{
iclosest=i;
closest = pow(xpos-mouseX,2)+pow(ypos-mouseY,2);
}
else if (pow(xpos-mouseX,2)+pow(ypos-mouseY,2)<closest)
{
iclosest=i;
closest = pow(xpos-mouseX,2)+pow(ypos-mouseY,2);
}
}
}
printf("---------------------------------------------------\n");
printf("Closest point has TOA number %d (starting from 1)\n",iclosest+1);
ld_printf("SAT = %Lf\n",psr[0].obsn[iclosest].sat);
ld_printf("BAT = %Lf\n",psr[0].obsn[iclosest].bat);
ld_printf("Pre-fit residual = %Lf\n",psr[0].obsn[iclosest].prefitResidual);
ld_printf("Post-fit residual = %Lf\n",psr[0].obsn[iclosest].residual);
printf("Observing frequency = %f\n",psr[0].obsn[iclosest].freq);
printf("---------------------------------------------------\n");
return closest;
}
int main(int argc, char *argv[])
{
float maxpow = 0.0, inx = 0.0, iny = 0.0;
double centerr, offsetf;
int zoomlevel, maxzoom, minzoom, xid, psid;
char *rootfilenm, inchar;
fftpart *lofp;
fftview *fv;
if (argc == 1) {
printf("\nusage: explorefft fftfilename\n\n");
exit(0);
}
printf("\n\n");
printf(" Interactive FFT Explorer\n");
printf(" by Scott M. Ransom\n");
printf(" October, 2001\n");
print_help();
{
int hassuffix = 0;
char *suffix;
hassuffix = split_root_suffix(argv[1], &rootfilenm, &suffix);
if (hassuffix) {
if (strcmp(suffix, "fft") != 0) {
printf("\nInput file ('%s') must be a FFT file ('.fft')!\n\n", argv[1]);
free(suffix);
exit(0);
}
free(suffix);
} else {
printf("\nInput file ('%s') must be a FFT file ('.fft')!\n\n", argv[1]);
exit(0);
}
}
/* Read the info file */
readinf(&idata, rootfilenm);
if (strlen(remove_whitespace(idata.object)) > 0) {
printf("Examining %s data from '%s'.\n\n",
remove_whitespace(idata.object), argv[1]);
} else {
printf("Examining data from '%s'.\n\n", argv[1]);
}
N = idata.N;
T = idata.dt * idata.N;
#ifdef USEMMAP
printf("Memory mapping the input FFT. This may take a while...\n");
mmap_file = open(argv[1], O_RDONLY);
{
int rt;
struct stat buf;
rt = fstat(mmap_file, &buf);
if (rt == -1) {
perror("\nError in fstat() in explorefft.c");
printf("\n");
exit(-1);
}
Nfft = buf.st_size / sizeof(fcomplex);
}
lofp = get_fftpart(0, Nfft);
#else
{
int numamps;
fftfile = chkfopen(argv[1], "rb");
Nfft = chkfilelen(fftfile, sizeof(fcomplex));
numamps = (Nfft > MAXBINS) ? (int) MAXBINS : (int) Nfft;
lofp = get_fftpart(0, numamps);
}
#endif
/* Plot the initial data */
{
int initnumbins = INITIALNUMBINS;
if (initnumbins > Nfft) {
initnumbins = next2_to_n(Nfft) / 2;
zoomlevel = LOGDISPLAYNUM - (int) (log(initnumbins) / log(2.0));
minzoom = zoomlevel;
} else {
zoomlevel = LOGDISPLAYNUM - LOGINITIALNUMBINS;
minzoom = LOGDISPLAYNUM - LOGMAXBINS;
}
maxzoom = LOGDISPLAYNUM - LOGMINBINS;
centerr = initnumbins / 2;
}
fv = get_fftview(centerr, zoomlevel, lofp);
/* Prep the XWIN device for PGPLOT */
xid = cpgopen("/XWIN");
if (xid <= 0) {
free(fv);
#ifdef USEMMAP
close(mmap_file);
#else
fclose(fftfile);
#endif
free_fftpart(lofp);
exit(EXIT_FAILURE);
}
cpgscr(15, 0.4, 0.4, 0.4);
cpgask(0);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
do {
cpgcurs(&inx, &iny, &inchar);
if (DEBUGOUT)
printf("You pressed '%c'\n", inchar);
switch (inchar) {
case 'A': /* Zoom in */
case 'a':
centerr = (inx + offsetf) * T;
case 'I':
case 'i':
if (DEBUGOUT)
printf(" Zooming in (zoomlevel = %d)...\n", zoomlevel);
if (zoomlevel < maxzoom) {
zoomlevel++;
free(fv);
fv = get_fftview(centerr, zoomlevel, lofp);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
} else
printf(" Already at maximum zoom level (%d).\n", zoomlevel);
break;
case 'X': /* Zoom out */
case 'x':
case 'O':
case 'o':
if (DEBUGOUT)
printf(" Zooming out (zoomlevel = %d)...\n", zoomlevel);
if (zoomlevel > minzoom) {
zoomlevel--;
free(fv);
fv = get_fftview(centerr, zoomlevel, lofp);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
} else
printf(" Already at minimum zoom level (%d).\n", zoomlevel);
break;
case '<': /* Shift left 1 full screen */
centerr -= fv->numbins + fv->numbins / 8;
case ',': /* Shift left 1/8 screen */
if (DEBUGOUT)
printf(" Shifting left...\n");
centerr -= fv->numbins / 8;
{ /* Should probably get the previous chunk from the fftfile... */
double lowestr;
lowestr = 0.5 * fv->numbins;
if (centerr < lowestr)
centerr = lowestr;
}
free(fv);
fv = get_fftview(centerr, zoomlevel, lofp);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
break;
case '>': /* Shift right 1 full screen */
centerr += fv->numbins - fv->numbins / 8;
case '.': /* Shift right 1/8 screen */
if (DEBUGOUT)
printf(" Shifting right...\n");
centerr += fv->numbins / 8;
{ /* Should probably get the next chunk from the fftfile... */
double highestr;
highestr = lofp->rlo + lofp->numamps - 0.5 * fv->numbins;
if (centerr > highestr)
centerr = highestr;
}
free(fv);
fv = get_fftview(centerr, zoomlevel, lofp);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
break;
case '+': /* Increase height of powers */
case '=':
if (maxpow == 0.0) {
printf(" Auto-scaling is off.\n");
maxpow = 1.1 * fv->maxpow;
}
maxpow = 3.0 / 4.0 * maxpow;
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
break;
case '-': /* Decrease height of powers */
case '_':
if (maxpow == 0.0) {
printf(" Auto-scaling is off.\n");
maxpow = 1.1 * fv->maxpow;
}
maxpow = 4.0 / 3.0 * maxpow;
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
break;
case 'S': /* Auto-scale */
case 's':
if (maxpow == 0.0)
break;
else {
printf(" Auto-scaling is on.\n");
maxpow = 0.0;
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
break;
}
case 'G': /* Goto a frequency */
case 'g':
{
char freqstr[50];
double freq = -1.0;
while (freq < 0.0) {
printf(" Enter the frequency (Hz) to go to:\n");
fgets(freqstr, 50, stdin);
freqstr[strlen(freqstr) - 1] = '\0';
freq = atof(freqstr);
}
offsetf = 0.0;
centerr = freq * T;
printf(" Moving to frequency %.15g.\n", freq);
free(fv);
fv = get_fftview(centerr, zoomlevel, lofp);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, centerr, 2);
}
break;
case 'H': /* Show harmonics */
case 'h':
{
double retval;
retval = harmonic_loop(xid, centerr, zoomlevel, lofp);
if (retval > 0.0) {
offsetf = 0.0;
centerr = retval;
free(fv);
fv = get_fftview(centerr, zoomlevel, lofp);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, centerr, 2);
}
}
break;
case '?': /* Print help screen */
print_help();
break;
case 'D': /* Show details about a selected point */
case 'd':
{
double newr;
printf(" Searching for peak near freq = %.7g Hz...\n", (inx + offsetf));
newr = find_peak(inx + offsetf, fv, lofp);
centerr = newr;
free(fv);
fv = get_fftview(centerr, zoomlevel, lofp);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, centerr, 2);
}
break;
case 'L': /* Load a zaplist */
case 'l':
{
int ii, len;
char filename[200];
double *lobins, *hibins;
printf(" Enter the filename containing the zaplist to load:\n");
fgets(filename, 199, stdin);
len = strlen(filename) - 1;
filename[len] = '\0';
numzaplist = get_birdies(filename, T, 0.0, &lobins, &hibins);
lenzaplist = numzaplist + 20; /* Allow some room to add more */
if (lenzaplist)
free(zaplist);
zaplist = (bird *) malloc(sizeof(bird) * lenzaplist);
for (ii = 0; ii < numzaplist; ii++) {
zaplist[ii].lobin = lobins[ii];
zaplist[ii].hibin = hibins[ii];
}
vect_free(lobins);
vect_free(hibins);
printf("\n");
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
}
break;
case 'Z': /* Add a birdie to a zaplist */
case 'z':
{
int badchoice = 2;
float lox, hix, loy, hiy;
double rs[2];
char choice;
if (numzaplist + 1 > lenzaplist) {
lenzaplist += 10;
zaplist = (bird *) realloc(zaplist, sizeof(bird) * lenzaplist);
}
cpgqwin(&lox, &hix, &loy, &hiy);
printf(" Click the left mouse button on the first frequency limit.\n");
while (badchoice) {
cpgcurs(&inx, &iny, &choice);
if (choice == 'A' || choice == 'a') {
rs[2 - badchoice] = ((double) inx + offsetf) * T;
cpgsave();
cpgsci(7);
cpgmove(inx, 0.0);
cpgdraw(inx, hiy);
cpgunsa();
badchoice--;
if (badchoice == 1)
printf
(" Click the left mouse button on the second frequency limit.\n");
} else {
printf(" Option not recognized.\n");
}
};
if (rs[1] > rs[0]) {
zaplist[numzaplist].lobin = rs[0];
zaplist[numzaplist].hibin = rs[1];
} else {
zaplist[numzaplist].lobin = rs[1];
zaplist[numzaplist].hibin = rs[0];
}
printf(" The new birdie has: f_avg = %.15g f_width = %.15g\n\n",
0.5 * (zaplist[numzaplist].hibin + zaplist[numzaplist].lobin) / T,
(zaplist[numzaplist].hibin - zaplist[numzaplist].lobin) / T);
numzaplist++;
qsort(zaplist, numzaplist, sizeof(bird), compare_birds);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
}
break;
case 'P': /* Print the current plot */
case 'p':
{
int len;
char filename[200];
printf(" Enter the filename to save the plot as:\n");
fgets(filename, 196, stdin);
len = strlen(filename) - 1;
filename[len + 0] = '/';
filename[len + 1] = 'P';
filename[len + 2] = 'S';
filename[len + 3] = '\0';
psid = cpgopen(filename);
cpgslct(psid);
cpgpap(10.25, 8.5 / 11.0);
cpgiden();
cpgscr(15, 0.8, 0.8, 0.8);
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
cpgclos();
cpgslct(xid);
cpgscr(15, 0.4, 0.4, 0.4);
filename[len] = '\0';
printf(" Wrote the plot to the file '%s'.\n", filename);
}
break;
case 'N': /* Changing power normalization */
case 'n':
{
float inx2 = 0.0, iny2 = 0.0;
char choice;
unsigned char badchoice = 1;
printf(" Specify the type of power normalization:\n"
" m,M : Median values determined locally\n"
" d,D : DC frequency amplitude\n"
" r,R : Raw powers (i.e. no normalization)\n"
" u,U : User specified interval (the average powers)\n");
while (badchoice) {
cpgcurs(&inx2, &iny2, &choice);
switch (choice) {
case 'M':
case 'm':
norm_const = 0.0;
maxpow = 0.0;
badchoice = 0;
printf
(" Using local median normalization. Autoscaling is on.\n");
break;
case 'D':
case 'd':
norm_const = 1.0 / r0;
maxpow = 0.0;
badchoice = 0;
printf
(" Using DC frequency (%f) normalization. Autoscaling is on.\n",
r0);
break;
case 'R':
case 'r':
norm_const = 1.0;
maxpow = 0.0;
badchoice = 0;
printf
(" Using raw powers (i.e. no normalization). Autoscaling is on.\n");
break;
case 'U':
case 'u':
{
char choice2;
float xx = inx, yy = iny;
int lor, hir, numr;
double avg, var;
printf
(" Use the left mouse button to select a left and right boundary\n"
" of a region to calculate the average power.\n");
do {
cpgcurs(&xx, &yy, &choice2);
} while (choice2 != 'A' && choice2 != 'a');
lor = (int) ((xx + offsetf) * T);
cpgsci(7);
cpgmove(xx, 0.0);
cpgdraw(xx, 10.0 * fv->maxpow);
do {
cpgcurs(&xx, &yy, &choice2);
} while (choice2 != 'A' && choice2 != 'a');
hir = (int) ((xx + offsetf) * T);
cpgmove(xx, 0.0);
cpgdraw(xx, 10.0 * fv->maxpow);
cpgsci(1);
if (lor > hir) {
int tempr;
tempr = hir;
hir = lor;
lor = tempr;
}
numr = hir - lor + 1;
avg_var(lofp->rawpowers + lor - lofp->rlo, numr, &avg, &var);
printf(" Selection has: average = %.5g\n"
" std dev = %.5g\n", avg, sqrt(var));
norm_const = 1.0 / avg;
maxpow = 0.0;
badchoice = 0;
printf
(" Using %.5g as the normalization constant. Autoscaling is on.\n",
avg);
break;
}
default:
printf(" Unrecognized choice '%c'.\n", choice);
break;
}
}
free(fv);
fv = get_fftview(centerr, zoomlevel, lofp);
cpgpage();
offsetf = plot_fftview(fv, maxpow, 1.0, 0.0, 0);
}
break;
case 'Q': /* Quit */
case 'q':
printf(" Quitting...\n");
free(fv);
cpgclos();
break;
default:
printf(" Unrecognized option '%c'.\n", inchar);
break;
}
} while (inchar != 'Q' && inchar != 'q');
free_fftpart(lofp);
#ifdef USEMMAP
close(mmap_file);
#else
fclose(fftfile);
#endif
if (lenzaplist)
free(zaplist);
printf("Done\n\n");
return 0;
}
