/*!
\brief Delete table
\param drvname driver name
\param dbname database name
\param tblname table name
\return DB_OK on success
\return DB_FAILED on failure
*/
int db_delete_table(const char *drvname, const char *dbname, const char *tblname)
{
dbDriver *driver;
dbString sql;
G_debug(3, "db_delete_table(): driver = %s, db = %s, table = %s\n",
drvname, dbname, tblname);
/* Open driver and database */
driver = db_start_driver_open_database(drvname, dbname);
if (driver == NULL) {
G_warning(_("Unable open database <%s> by driver <%s>"), dbname,
drvname);
return DB_FAILED;
}
/* Delete table */
/* TODO test if the tables exist */
db_init_string(&sql);
db_set_string(&sql, "drop table ");
db_append_string(&sql, tblname);
G_debug(3, "%s", db_get_string(&sql));
if (db_execute_immediate(driver, &sql) != DB_OK) {
G_warning(_("Unable to drop table: '%s'"),
db_get_string(&sql));
db_close_database_shutdown_driver(driver);
return DB_FAILED;
}
db_close_database_shutdown_driver(driver);
return DB_OK;
}
bool OGRGRASSLayer::StopDbDriver()
{
if ( !poDriver )
{
CPLError( CE_Failure, CPLE_AppDefined, "Driver is not started" );
return true; // I think that true is OK here
}
// TODO!!!: Because of bug in GRASS library it is impossible
// to stop drivers in FIFO order. Until this is fixed
// we have to use kill
CPLDebug ( "GRASS", "driver PID = %d", poDriver->pid );
#if defined(_WIN32) || defined(__WIN32__)
db_close_database_shutdown_driver ( poDriver );
#else
if ( kill (poDriver->pid, SIGINT) != 0 )
{
if ( kill (poDriver->pid, SIGKILL) != 0 )
{
CPLError( CE_Failure, CPLE_AppDefined, "Cannot stop database "
"driver pid = %d", poDriver->pid );
}
}
#endif
bCursorOpened = false;
return true;
}
int load_catval_array_rot(struct Map_info *map, int vec,
dbCatValArray * cvarr_rot)
{
int i, nrec, ctype;
struct field_info *Fi;
dbDriver *driver;
G_debug(2, "Loading dynamic symbol rotation ...");
db_CatValArray_init(cvarr_rot);
Fi = Vect_get_field(map, vector.layer[vec].field);
if (Fi == NULL) {
G_fatal_error(_("Unable to get layer info for vector map"));
}
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
/* Note do not check if the column exists in the table because it may be expression */
/* TODO: only select values we need instead of all in column */
nrec = db_select_CatValArray(driver, Fi->table, Fi->key,
vector.layer[vec].rotcol, NULL, cvarr_rot);
G_debug(3, "nrec = %d", nrec);
ctype = cvarr_rot->ctype;
if (ctype != DB_C_TYPE_INT && ctype != DB_C_TYPE_DOUBLE)
G_fatal_error(_("Rotation column type must be numeric"));
if (nrec < 0)
G_fatal_error(_("Unable to select data from table"));
G_debug(2, "\nRotate column: %d records selected from table", nrec);
db_close_database_shutdown_driver(driver);
for (i = 0; i < cvarr_rot->n_values; i++) {
if (ctype == DB_C_TYPE_INT) {
G_debug(4, "cat = %d val = %d", cvarr_rot->value[i].cat,
cvarr_rot->value[i].val.i);
}
else if (ctype == DB_C_TYPE_DOUBLE) {
G_debug(4, "cat = %d val = %f", cvarr_rot->value[i].cat,
cvarr_rot->value[i].val.d);
}
}
return nrec;
}
/*!
\brief Get node cost
For each node in the map, finds the category of the point on it (if
there is any) and stores the value associated with this category in
the array node_costs. If there is no point with a category,
node_costs=0.
node_costs are multiplied by 1000000 and truncated to integers (as
is done in Vect_net_build_graph)
\param In pointer to Map_info structure
\param layer layer number
\param column name of column
\param[out] node_costs list of node costs
\returns 1 on success
\return 0 on failure
*/
int NetA_get_node_costs(struct Map_info *In, int layer, char *column,
int *node_costs)
{
int i, nlines, nnodes;
dbCatValArray vals;
struct line_cats *Cats;
struct line_pnts *Points;
dbDriver *driver;
struct field_info *Fi;
Fi = Vect_get_field(In, layer);
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
nlines = Vect_get_num_lines(In);
nnodes = Vect_get_num_nodes(In);
Cats = Vect_new_cats_struct();
Points = Vect_new_line_struct();
for (i = 1; i <= nnodes; i++)
node_costs[i] = 0;
db_CatValArray_init(&vals);
if (db_select_CatValArray(driver, Fi->table, Fi->key, column, NULL, &vals)
== -1)
return 0;
for (i = 1; i <= nlines; i++) {
int type = Vect_read_line(In, Points, Cats, i);
if (type == GV_POINT) {
int node, cat;
double value;
if (!Vect_cat_get(Cats, layer, &cat))
continue;
Vect_get_line_nodes(In, i, &node, NULL);
if (db_CatValArray_get_value_double(&vals, cat, &value) == DB_OK)
node_costs[node] = value * 1000000.0;
}
}
Vect_destroy_cats_struct(Cats);
db_CatValArray_free(&vals);
db_close_database_shutdown_driver(driver);
return 1;
}
int insert_new_record(dbDriver * driver, struct field_info *Fi,
dbString * sql, int cat, int comp)
{
char buf[2000];
sprintf(buf, "insert into %s values (%d, %d)", Fi->table, cat, comp);
db_set_string(sql, buf);
G_debug(3, "%s", db_get_string(sql));
if (db_execute_immediate(driver, sql) != DB_OK) {
db_close_database_shutdown_driver(driver);
G_fatal_error(_("Cannot insert new record: %s"), db_get_string(sql));
return 0;
};
return 1;
}
int load_catval_array_rgb(struct Map_info *map, int vec,
dbCatValArray * cvarr_rgb)
{
int i, nrec, ctype;
struct field_info *Fi;
dbDriver *driver;
G_debug(2, "Loading dynamic symbol colors ...");
db_CatValArray_init(cvarr_rgb);
Fi = Vect_get_field(map, vector.layer[vec].field);
if (Fi == NULL) {
G_fatal_error(_("Unable to get layer info for vector map"));
}
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
nrec = db_select_CatValArray(driver, Fi->table, Fi->key,
vector.layer[vec].rgbcol, NULL, cvarr_rgb);
G_debug(3, "nrec_rgb = %d", nrec);
ctype = cvarr_rgb->ctype;
if (ctype != DB_C_TYPE_STRING)
G_fatal_error(_("Column type not supported (must be string)"));
if (nrec < 0)
G_fatal_error(_("Unable to select data from table"));
G_debug(2, "\nRGB column: %d records selected from table", nrec);
for (i = 0; i < cvarr_rgb->n_values; i++) {
G_debug(4, "cat = %d val = %s", cvarr_rgb->value[i].cat,
cvarr_rgb->value[i].val.s->string);
}
db_close_database_shutdown_driver(driver);
return nrec;
}
void process_node(int node, int cat)
{
char buf[2000];
sprintf(buf, "INSERT INTO %s VALUES(%d", Fi->table, cat);
db_set_string(&sql, buf);
if (deg_opt->answer)
append_double(&sql, deg[node]);
if (close_opt->answer)
append_double(&sql, closeness[node]);
if (betw_opt->answer)
append_double(&sql, betw[node]);
if (eigen_opt->answer)
append_double(&sql, eigen[node]);
db_append_string(&sql, ")");
if (db_execute_immediate(driver, &sql) != DB_OK) {
db_close_database_shutdown_driver(driver);
G_fatal_error(_("Cannot insert new record: %s"), db_get_string(&sql));
}
}
void QgsGrassVectorMapLayer::load()
{
clear();
if ( !mMap )
{
return;
}
// Attributes are not loaded for topo layers in which case field == 0
if ( mField == 0 )
{
return;
}
QgsDebugMsg( QString( "cidxFieldIndex() = %1 cidxFieldNumCats() = %2" ).arg( cidxFieldIndex() ).arg( cidxFieldNumCats() ) );
mFieldInfo = Vect_get_field( mMap->map(), mField ); // should work also with field = 0
if ( !mFieldInfo )
{
QgsDebugMsg( "No field info -> no attribute table" );
}
else
{
QgsDebugMsg( "Field info found -> open database" );
QFileInfo di( mMap->grassObject().mapsetPath() + "/vector/" + mMap->grassObject().name() + "/dbln" );
mLastLoaded = di.lastModified();
QString error;
dbDriver *databaseDriver = openDriver( error );
if ( !databaseDriver || !error.isEmpty() )
{
QgsDebugMsg( error );
}
else
{
QgsDebugMsg( "Database opened -> open select cursor" );
QgsGrass::lock(); // not sure if lock is necessary
dbString dbstr;
db_init_string( &dbstr );
db_set_string( &dbstr, ( char * )"select * from " );
db_append_string( &dbstr, mFieldInfo->table );
QgsDebugMsg( QString( "SQL: %1" ).arg( db_get_string( &dbstr ) ) );
dbCursor databaseCursor;
if ( db_open_select_cursor( databaseDriver, &dbstr, &databaseCursor, DB_SCROLL ) != DB_OK )
{
db_close_database_shutdown_driver( databaseDriver );
QgsGrass::warning( "Cannot select attributes from table '" + QString( mFieldInfo->table ) + "'" );
}
else
{
#ifdef QGISDEBUG
int nRecords = db_get_num_rows( &databaseCursor );
QgsDebugMsg( QString( "Number of records: %1" ).arg( nRecords ) );
#endif
dbTable *databaseTable = db_get_cursor_table( &databaseCursor );
int nColumns = db_get_table_number_of_columns( databaseTable );
// Read columns' description
for ( int i = 0; i < nColumns; i++ )
{
QPair<double, double> minMax( DBL_MAX, -DBL_MAX );
dbColumn *column = db_get_table_column( databaseTable, i );
int ctype = db_sqltype_to_Ctype( db_get_column_sqltype( column ) );
QVariant::Type qtype = QVariant::String; //default to string
QgsDebugMsg( QString( "column = %1 ctype = %2" ).arg( db_get_column_name( column ) ).arg( ctype ) );
QString ctypeStr;
switch ( ctype )
{
case DB_C_TYPE_INT:
ctypeStr = QStringLiteral( "integer" );
qtype = QVariant::Int;
break;
case DB_C_TYPE_DOUBLE:
ctypeStr = QStringLiteral( "double" );
qtype = QVariant::Double;
break;
case DB_C_TYPE_STRING:
ctypeStr = QStringLiteral( "string" );
qtype = QVariant::String;
break;
case DB_C_TYPE_DATETIME:
ctypeStr = QStringLiteral( "datetime" );
qtype = QVariant::String;
break;
}
mTableFields.append( QgsField( db_get_column_name( column ), qtype, ctypeStr,
db_get_column_length( column ), db_get_column_precision( column ) ) );
mMinMax << minMax;
if ( G_strcasecmp( db_get_column_name( column ), mFieldInfo->key ) == 0 )
{
mKeyColumn = i;
}
}
if ( mKeyColumn < 0 )
{
mTableFields.clear();
QgsGrass::warning( QObject::tr( "Key column '%1' not found in the table '%2'" ).arg( mFieldInfo->key, mFieldInfo->table ) );
}
else
{
mHasTable = true;
// Read attributes to the memory
for ( ;; )
{
int more;
if ( db_fetch( &databaseCursor, DB_NEXT, &more ) != DB_OK )
{
QgsDebugMsg( "Cannot fetch DB record" );
break;
}
if ( !more )
{
break; // no more records
}
// Check cat value
dbColumn *column = db_get_table_column( databaseTable, mKeyColumn );
dbValue *value = db_get_column_value( column );
if ( db_test_value_isnull( value ) )
{
continue;
}
int cat = db_get_value_int( value );
if ( cat < 0 )
{
continue;
}
QList<QVariant> values;
for ( int i = 0; i < nColumns; i++ )
{
column = db_get_table_column( databaseTable, i );
int sqltype = db_get_column_sqltype( column );
int ctype = db_sqltype_to_Ctype( sqltype );
value = db_get_column_value( column );
db_convert_value_to_string( value, sqltype, &dbstr );
QgsDebugMsgLevel( QString( "column = %1 value = %2" ).arg( db_get_column_name( column ), db_get_string( &dbstr ) ), 3 );
QVariant variant;
if ( !db_test_value_isnull( value ) )
{
int iv;
double dv;
//layer.mAttributes[layer.nAttributes].values[i] = strdup( db_get_string( &dbstr ) );
switch ( ctype )
{
case DB_C_TYPE_INT:
iv = db_get_value_int( value );
variant = QVariant( iv );
mMinMax[i].first = std::min( mMinMax[i].first, ( double )iv );
mMinMax[i].second = std::min( mMinMax[i].second, ( double )iv );
break;
case DB_C_TYPE_DOUBLE:
dv = db_get_value_double( value );
variant = QVariant( dv );
mMinMax[i].first = std::min( mMinMax[i].first, dv );
mMinMax[i].second = std::min( mMinMax[i].second, dv );
break;
case DB_C_TYPE_STRING:
// Store as byte array so that codec may be used later
variant = QVariant( QByteArray( db_get_value_string( value ) ) );
break;
case DB_C_TYPE_DATETIME:
variant = QVariant( QByteArray( db_get_string( &dbstr ) ) );
break;
default:
variant = QVariant( QByteArray( db_get_string( &dbstr ) ) );
}
}
QgsDebugMsgLevel( QString( "column = %1 variant = %2" ).arg( db_get_column_name( column ), variant.toString() ), 3 );
values << variant;
}
mAttributes.insert( cat, values );
}
}
mValid = true;
db_close_cursor( &databaseCursor );
db_close_database_shutdown_driver( databaseDriver );
db_free_string( &dbstr );
QgsDebugMsg( QString( "mTableFields.size = %1" ).arg( mTableFields.size() ) );
QgsDebugMsg( QString( "number of attributes = %1" ).arg( mAttributes.size() ) );
}
QgsGrass::unlock();
}
}
// Add cat if no attribute fields exist (otherwise qgis crashes)
if ( mTableFields.size() == 0 )
{
mKeyColumn = 0;
mTableFields.append( QgsField( QStringLiteral( "cat" ), QVariant::Int, QStringLiteral( "integer" ) ) );
QPair<double, double> minMax( 0, 0 );
if ( cidxFieldIndex() >= 0 )
{
int ncats, cat, type, id;
ncats = Vect_cidx_get_num_cats_by_index( mMap->map(), cidxFieldIndex() );
if ( ncats > 0 )
{
Vect_cidx_get_cat_by_index( mMap->map(), cidxFieldIndex(), 0, &cat, &type, &id );
minMax.first = cat;
Vect_cidx_get_cat_by_index( mMap->map(), cidxFieldIndex(), ncats - 1, &cat, &type, &id );
minMax.second = cat;
}
}
mMinMax << minMax;
}
mFields = mTableFields;
mAttributeFields = mTableFields;
QgsDebugMsg( QString( "layer loaded mTableFields.size() = %1 mAttributes.size() = %2" ).arg( mTableFields.size() ).arg( mAttributes.size() ) );
mValid = true;
}
int close_streamvect(char *stream_vect)
{
int r, c, r_nbr, c_nbr, done;
GW_LARGE_INT i;
CELL stream_id, stream_nbr;
ASP_FLAG af;
int next_node;
struct sstack
{
int stream_id;
int next_trib;
} *nodestack;
int top = 0, stack_step = 1000;
int asp_r[9] = { 0, -1, -1, -1, 0, 1, 1, 1, 0 };
int asp_c[9] = { 0, 1, 0, -1, -1, -1, 0, 1, 1 };
struct Map_info Out;
static struct line_pnts *Points;
struct line_cats *Cats;
dbDriver *driver;
dbHandle handle;
dbString table_name, dbsql, valstr;
struct field_info *Fi;
char *cat_col_name = "cat", buf[2000];
struct Cell_head window;
double north_offset, west_offset, ns_res, ew_res;
int next_cat;
G_message(_("Writing vector map <%s>..."), stream_vect);
if (Vect_open_new(&Out, stream_vect, 0) < 0)
G_fatal_error(_("Unable to create vector map <%s>"), stream_vect);
nodestack = (struct sstack *)G_malloc(stack_step * sizeof(struct sstack));
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
G_get_set_window(&window);
ns_res = window.ns_res;
ew_res = window.ew_res;
north_offset = window.north - 0.5 * ns_res;
west_offset = window.west + 0.5 * ew_res;
next_cat = n_stream_nodes + 1;
for (i = 0; i < n_outlets; i++, next_cat++) {
G_percent(i, n_outlets, 2);
r = outlets[i].r;
c = outlets[i].c;
cseg_get(&stream, &stream_id, r, c);
if (!stream_id)
continue;
Vect_reset_line(Points);
Vect_reset_cats(Cats);
/* outlet */
Vect_cat_set(Cats, 1, stream_id);
Vect_cat_set(Cats, 2, 2);
Vect_append_point(Points, west_offset + c * ew_res,
north_offset - r * ns_res, 0);
Vect_write_line(&Out, GV_POINT, Points, Cats);
/* add root node to stack */
G_debug(3, "add root node");
top = 0;
nodestack[top].stream_id = stream_id;
nodestack[top].next_trib = 0;
/* depth first post order traversal */
G_debug(3, "traverse");
while (top >= 0) {
done = 1;
stream_id = nodestack[top].stream_id;
G_debug(3, "stream_id %d", stream_id);
if (nodestack[top].next_trib < stream_node[stream_id].n_trib) {
/* add to stack */
next_node =
stream_node[stream_id].trib[nodestack[top].next_trib];
G_debug(3, "add to stack: next %d, trib %d, n trib %d",
next_node, nodestack[top].next_trib,
stream_node[stream_id].n_trib);
nodestack[top].next_trib++;
top++;
if (top >= stack_step) {
/* need more space */
stack_step += 1000;
nodestack =
(struct sstack *)G_realloc(nodestack,
stack_step *
sizeof(struct sstack));
}
nodestack[top].next_trib = 0;
nodestack[top].stream_id = next_node;
done = 0;
G_debug(3, "go further down");
}
if (done) {
G_debug(3, "write stream segment");
Vect_reset_line(Points);
Vect_reset_cats(Cats);
r_nbr = stream_node[stream_id].r;
c_nbr = stream_node[stream_id].c;
cseg_get(&stream, &stream_nbr, r_nbr, c_nbr);
if (stream_nbr <= 0)
G_fatal_error(_("Stream id %d not set, top is %d, parent is %d"),
stream_id, top, nodestack[top - 1].stream_id);
Vect_cat_set(Cats, 1, stream_id);
if (stream_node[stream_id].n_trib == 0)
Vect_cat_set(Cats, 2, 0);
else
Vect_cat_set(Cats, 2, 1);
Vect_append_point(Points, west_offset + c_nbr * ew_res,
north_offset - r_nbr * ns_res, 0);
Vect_write_line(&Out, GV_POINT, Points, Cats);
seg_get(&aspflag, (char *)&af, r_nbr, c_nbr);
while (af.asp > 0) {
r_nbr = r_nbr + asp_r[(int)af.asp];
c_nbr = c_nbr + asp_c[(int)af.asp];
cseg_get(&stream, &stream_nbr, r_nbr, c_nbr);
if (stream_nbr <= 0)
G_fatal_error(_("Stream id not set while tracing"));
Vect_append_point(Points, west_offset + c_nbr * ew_res,
north_offset - r_nbr * ns_res, 0);
if (stream_nbr != stream_id) {
/* first point of parent stream */
break;
}
seg_get(&aspflag, (char *)&af, r_nbr, c_nbr);
}
Vect_write_line(&Out, GV_LINE, Points, Cats);
top--;
}
}
}
G_percent(n_outlets, n_outlets, 1); /* finish it */
G_message(_("Writing attribute data..."));
/* Prepeare strings for use in db_* calls */
db_init_string(&dbsql);
db_init_string(&valstr);
db_init_string(&table_name);
db_init_handle(&handle);
/* Preparing database for use */
/* Create database for new vector map */
Fi = Vect_default_field_info(&Out, 1, NULL, GV_1TABLE);
driver = db_start_driver_open_database(Fi->driver,
Vect_subst_var(Fi->database,
&Out));
if (driver == NULL) {
G_fatal_error(_("Unable to start driver <%s>"), Fi->driver);
}
db_set_error_handler_driver(driver);
G_debug(1, "table: %s", Fi->table);
G_debug(1, "driver: %s", Fi->driver);
G_debug(1, "database: %s", Fi->database);
sprintf(buf,
"create table %s (%s integer, stream_type varchar(20), type_code integer)",
Fi->table, cat_col_name);
db_set_string(&dbsql, buf);
if (db_execute_immediate(driver, &dbsql) != DB_OK) {
db_close_database(driver);
db_shutdown_driver(driver);
G_fatal_error(_("Unable to create table: '%s'"), db_get_string(&dbsql));
}
if (db_create_index2(driver, Fi->table, cat_col_name) != DB_OK)
G_warning(_("Unable to create index on table <%s>"), Fi->table);
if (db_grant_on_table(driver, Fi->table, DB_PRIV_SELECT,
DB_GROUP | DB_PUBLIC) != DB_OK)
G_fatal_error(_("Unable to grant privileges on table <%s>"), Fi->table);
db_begin_transaction(driver);
/* stream nodes */
for (i = 1; i <= n_stream_nodes; i++) {
sprintf(buf, "insert into %s values ( %lld, \'%s\', %d )",
Fi->table, i,
(stream_node[i].n_trib > 0 ? "intermediate" : "start"),
(stream_node[i].n_trib > 0));
db_set_string(&dbsql, buf);
if (db_execute_immediate(driver, &dbsql) != DB_OK) {
db_close_database(driver);
db_shutdown_driver(driver);
G_fatal_error(_("Unable to insert new row: '%s'"),
db_get_string(&dbsql));
}
}
db_commit_transaction(driver);
db_close_database_shutdown_driver(driver);
Vect_map_add_dblink(&Out, 1, NULL, Fi->table,
cat_col_name, Fi->database, Fi->driver);
G_debug(1, "close vector");
Vect_hist_command(&Out);
Vect_build(&Out);
Vect_close(&Out);
G_free(nodestack);
return 1;
}
int main(int argc, char *argv[])
{
int i, j, nlines, type, field, cat;
int fd;
/* struct Categories RCats; *//* TODO */
struct Cell_head window;
RASTER_MAP_TYPE out_type;
CELL *cell;
DCELL *dcell;
double drow, dcol;
char buf[2000];
struct Option *vect_opt, *rast_opt, *field_opt, *col_opt, *where_opt;
int Cache_size;
struct order *cache;
int cur_row;
struct GModule *module;
struct Map_info Map;
struct line_pnts *Points;
struct line_cats *Cats;
int point;
int point_cnt; /* number of points in cache */
int outside_cnt; /* points outside region */
int nocat_cnt; /* points inside region but without category */
int dupl_cnt; /* duplicate categories */
struct bound_box box;
int *catexst, *cex;
struct field_info *Fi;
dbString stmt;
dbDriver *driver;
int select, norec_cnt, update_cnt, upderr_cnt, col_type;
G_gisinit(argv[0]);
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("raster"));
G_add_keyword(_("position"));
G_add_keyword(_("querying"));
G_add_keyword(_("attribute table"));
module->description =
_("Uploads raster values at positions of vector points to the table.");
vect_opt = G_define_standard_option(G_OPT_V_INPUT);
vect_opt->key = "vector";
vect_opt->description =
_("Name of input vector points map for which to edit attribute table");
rast_opt = G_define_standard_option(G_OPT_R_INPUT);
rast_opt->key = "raster";
rast_opt->description = _("Name of existing raster map to be queried");
field_opt = G_define_standard_option(G_OPT_V_FIELD);
col_opt = G_define_option();
col_opt->key = "column";
col_opt->type = TYPE_STRING;
col_opt->required = YES;
col_opt->description =
_("Column name (will be updated by raster values)");
where_opt = G_define_standard_option(G_OPT_DB_WHERE);
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
field = atoi(field_opt->answer);
db_init_string(&stmt);
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
G_get_window(&window);
Vect_region_box(&window, &box); /* T and B set to +/- PORT_DOUBLE_MAX */
/* Open vector */
Vect_set_open_level(2);
Vect_open_old(&Map, vect_opt->answer, "");
Fi = Vect_get_field(&Map, field);
if (Fi == NULL)
G_fatal_error(_("Database connection not defined for layer %d"),
field);
/* Open driver */
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL) {
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
}
/* Open raster */
fd = Rast_open_old(rast_opt->answer, "");
out_type = Rast_get_map_type(fd);
/* TODO: Later possibly category labels */
/*
if ( Rast_read_cats (name, "", &RCats) < 0 )
G_fatal_error ( "Cannot read category file");
*/
/* Check column type */
col_type = db_column_Ctype(driver, Fi->table, col_opt->answer);
if (col_type == -1)
G_fatal_error(_("Column <%s> not found"), col_opt->answer);
if (col_type != DB_C_TYPE_INT && col_type != DB_C_TYPE_DOUBLE)
G_fatal_error(_("Column type not supported"));
if (out_type == CELL_TYPE && col_type == DB_C_TYPE_DOUBLE)
G_warning(_("Raster type is integer and column type is float"));
if (out_type != CELL_TYPE && col_type == DB_C_TYPE_INT)
G_warning(_("Raster type is float and column type is integer, some data lost!!"));
/* Read vector points to cache */
Cache_size = Vect_get_num_primitives(&Map, GV_POINT);
/* Note: Some space may be wasted (outside region or no category) */
cache = (struct order *)G_calloc(Cache_size, sizeof(struct order));
point_cnt = outside_cnt = nocat_cnt = 0;
nlines = Vect_get_num_lines(&Map);
G_debug(1, "Reading %d vector features fom map", nlines);
for (i = 1; i <= nlines; i++) {
type = Vect_read_line(&Map, Points, Cats, i);
G_debug(4, "line = %d type = %d", i, type);
/* check type */
if (!(type & GV_POINT))
continue; /* Points only */
/* check region */
if (!Vect_point_in_box(Points->x[0], Points->y[0], 0.0, &box)) {
outside_cnt++;
continue;
}
Vect_cat_get(Cats, field, &cat);
if (cat < 0) { /* no category of given field */
nocat_cnt++;
continue;
}
G_debug(4, " cat = %d", cat);
/* Add point to cache */
drow = Rast_northing_to_row(Points->y[0], &window);
dcol = Rast_easting_to_col(Points->x[0], &window);
/* a special case.
* if north falls at southern edge, or east falls on eastern edge,
* the point will appear outside the window.
* So, for these edges, bring the point inside the window
*/
if (drow == window.rows)
drow--;
if (dcol == window.cols)
dcol--;
cache[point_cnt].row = (int)drow;
cache[point_cnt].col = (int)dcol;
cache[point_cnt].cat = cat;
cache[point_cnt].count = 1;
point_cnt++;
}
Vect_set_db_updated(&Map);
Vect_hist_command(&Map);
Vect_close(&Map);
G_debug(1, "Read %d vector points", point_cnt);
/* Cache may contain duplicate categories, sort by cat, find and remove duplicates
* and recalc count and decrease point_cnt */
qsort(cache, point_cnt, sizeof(struct order), by_cat);
G_debug(1, "Points are sorted, starting duplicate removal loop");
for (i = 0, j = 1; j < point_cnt; j++)
if (cache[i].cat != cache[j].cat)
cache[++i] = cache[j];
else
cache[i].count++;
point_cnt = i + 1;
G_debug(1, "%d vector points left after removal of duplicates",
point_cnt);
/* Report number of points not used */
if (outside_cnt)
G_warning(_("%d points outside current region were skipped"),
outside_cnt);
if (nocat_cnt)
G_warning(_("%d points without category were skipped"), nocat_cnt);
/* Sort cache by current region row */
qsort(cache, point_cnt, sizeof(struct order), by_row);
/* Allocate space for raster row */
if (out_type == CELL_TYPE)
cell = Rast_allocate_c_buf();
else
dcell = Rast_allocate_d_buf();
/* Extract raster values from file and store in cache */
G_debug(1, "Extracting raster values");
cur_row = -1;
for (point = 0; point < point_cnt; point++) {
if (cache[point].count > 1)
continue; /* duplicate cats */
if (cur_row != cache[point].row) {
if (out_type == CELL_TYPE)
Rast_get_c_row(fd, cell, cache[point].row);
else
Rast_get_d_row(fd, dcell, cache[point].row);
}
cur_row = cache[point].row;
if (out_type == CELL_TYPE) {
cache[point].value = cell[cache[point].col];
}
else {
cache[point].dvalue = dcell[cache[point].col];
}
} /* point loop */
/* Update table from cache */
G_debug(1, "Updating db table");
/* select existing categories to array (array is sorted) */
select = db_select_int(driver, Fi->table, Fi->key, NULL, &catexst);
db_begin_transaction(driver);
norec_cnt = update_cnt = upderr_cnt = dupl_cnt = 0;
for (point = 0; point < point_cnt; point++) {
if (cache[point].count > 1) {
G_warning(_("More points (%d) of category %d, value set to 'NULL'"),
cache[point].count, cache[point].cat);
dupl_cnt++;
}
/* category exist in DB ? */
cex =
(int *)bsearch((void *)&(cache[point].cat), catexst, select,
sizeof(int), srch_cat);
if (cex == NULL) { /* cat does not exist in DB */
norec_cnt++;
G_warning(_("No record for category %d in table <%s>"),
cache[point].cat, Fi->table);
continue;
}
sprintf(buf, "update %s set %s = ", Fi->table, col_opt->answer);
db_set_string(&stmt, buf);
if (out_type == CELL_TYPE) {
if (cache[point].count > 1 ||
Rast_is_c_null_value(&cache[point].value)) {
sprintf(buf, "NULL");
}
else {
sprintf(buf, "%d ", cache[point].value);
}
}
else { /* FCELL or DCELL */
if (cache[point].count > 1 ||
Rast_is_d_null_value(&cache[point].dvalue)) {
sprintf(buf, "NULL");
}
else {
sprintf(buf, "%.10f", cache[point].dvalue);
}
}
db_append_string(&stmt, buf);
sprintf(buf, " where %s = %d", Fi->key, cache[point].cat);
db_append_string(&stmt, buf);
/* user provides where condition: */
if (where_opt->answer) {
sprintf(buf, " AND %s", where_opt->answer);
db_append_string(&stmt, buf);
}
G_debug(3, db_get_string(&stmt));
/* Update table */
if (db_execute_immediate(driver, &stmt) == DB_OK) {
update_cnt++;
}
else {
upderr_cnt++;
}
}
G_debug(1, "Committing DB transaction");
db_commit_transaction(driver);
G_free(catexst);
db_close_database_shutdown_driver(driver);
db_free_string(&stmt);
/* Report */
G_message(_("%d categories loaded from table"), select);
G_message(_("%d categories loaded from vector"), point_cnt);
G_message(_("%d categories from vector missing in table"), norec_cnt);
G_message(_("%d duplicate categories in vector"), dupl_cnt);
if (!where_opt->answer)
G_message(_("%d records updated"), update_cnt);
G_message(_("%d update errors"), upderr_cnt);
exit(EXIT_SUCCESS);
}
int update(struct Map_info *Map)
{
int i, *catexst, *cex, upd, fcat;
char buf1[2000], buf2[2000], left[20], right[20];
struct field_info *qFi, *Fi;
dbString stmt;
dbDriver *driver;
vstat.dupl = 0;
vstat.exist = 0;
vstat.notexist = 0;
vstat.update = 0;
vstat.error = 0;
db_init_string(&stmt);
/* layer to find table to read from */
qFi = Vect_get_field(Map, options.qfield);
if (options.option == O_QUERY && qFi == NULL)
G_fatal_error(_("Database connection not defined for layer %d. Use v.db.connect first."),
options.qfield);
/* layer to find table to write to */
if ((Fi = Vect_get_field(Map, options.field)) == NULL)
G_fatal_error(_("Database connection not defined for layer %d. Use v.db.connect first."),
options.field);
if (qFi) {
G_debug(3, "Reading from map <%s>, query layer %d (table <%s>): updating table <%s>, column <%s>",
options.name, options.qfield, qFi->table, Fi->table, Fi->key);
}
else {
G_debug(3, "Reading from map <%s>, updating table <%s>, column <%s>",
options.name, Fi->table, Fi->key);
}
/* Open driver */
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL) {
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
}
db_set_error_handler_driver(driver);
db_begin_transaction(driver);
/* select existing categories (layer) to array (array is sorted) */
vstat.select = db_select_int(driver, Fi->table, Fi->key, NULL, &catexst);
G_debug(3, "Existing categories: %d", vstat.select);
/* create beginning of stmt */
switch (options.option) {
case O_CAT:
sprintf(buf1, "insert into %s ( %s ) values ", Fi->table, Fi->key);
break;
case O_COUNT:
case O_LENGTH:
case O_AREA:
case O_QUERY:
case O_COMPACT:
case O_FD:
case O_PERIMETER:
case O_SLOPE:
case O_SINUOUS:
case O_AZIMUTH:
sprintf(buf1, "update %s set %s =", Fi->table, options.col[0]);
break;
case O_COOR:
case O_START:
case O_END:
case O_SIDES:
sprintf(buf1, "update %s set ", Fi->table);
break;
}
/* update */
G_message(_("Updating database..."));
for (i = 0; i < vstat.rcat; i++) {
G_percent(i, vstat.rcat, 2);
fcat = Values[i].cat;
if (fcat < 0)
continue;
switch (options.option) {
case O_CAT:
sprintf(buf2, "%s ( %d )", buf1, Values[i].cat);
break;
case O_COUNT:
sprintf(buf2, "%s %d where %s = %d", buf1, Values[i].count1,
Fi->key, Values[i].cat);
break;
case O_LENGTH:
case O_AREA:
case O_COMPACT:
case O_FD:
case O_PERIMETER:
case O_SLOPE:
case O_SINUOUS:
case O_AZIMUTH:
sprintf(buf2, "%s %f where %s = %d", buf1, Values[i].d1, Fi->key,
Values[i].cat);
break;
case O_COOR:
case O_START:
case O_END:
if (Values[i].count1 > 1) {
G_warning(_("More elements of category %d, nothing loaded to database"),
Values[i].cat);
vstat.dupl++;
continue;
}
if (Values[i].count1 < 1) { /* No points */
continue;
}
if (options.col[2]) {
sprintf(buf2,
"%s %s = %.15g, %s = %.15g, %s = %.15g where %s = %d",
buf1, options.col[0], Values[i].d1, options.col[1],
Values[i].d2, options.col[2], Values[i].d3, Fi->key,
Values[i].cat);
}
else {
sprintf(buf2, "%s %s = %.15g, %s = %.15g where %s = %d",
buf1, options.col[0], Values[i].d1, options.col[1],
Values[i].d2, Fi->key, Values[i].cat);
}
break;
case O_SIDES:
if (Values[i].count1 == 1) {
if (Values[i].i1 >= 0)
sprintf(left, "%d", Values[i].i1);
else
sprintf(left, "-1"); /* NULL, no area/cat */
}
else if (Values[i].count1 > 1) {
sprintf(left, "null");
}
else { /* Values[i].count1 == 0 */
/* It can be OK if the category is assigned to an element
type which is not GV_BOUNDARY */
/* -> TODO: print only if there is boundary with that cat */
sprintf(left, "null");
}
if (Values[i].count2 == 1) {
if (Values[i].i2 >= 0)
sprintf(right, "%d", Values[i].i2);
else
sprintf(right, "-1"); /* NULL, no area/cat */
}
else if (Values[i].count2 > 1) {
sprintf(right, "null");
}
else { /* Values[i].count1 == 0 */
sprintf(right, "null");
}
sprintf(buf2, "%s %s = %s, %s = %s where %s = %d", buf1,
options.col[0], left, options.col[1], right, Fi->key,
Values[i].cat);
break;
case O_QUERY:
if (Values[i].null) {
sprintf(buf2, "%s null where %s = %d", buf1, Fi->key,
Values[i].cat);
}
else {
switch (vstat.qtype) {
case (DB_C_TYPE_INT):
sprintf(buf2, "%s %d where %s = %d", buf1, Values[i].i1,
Fi->key, Values[i].cat);
break;
case (DB_C_TYPE_DOUBLE):
sprintf(buf2, "%s %f where %s = %d", buf1, Values[i].d1,
Fi->key, Values[i].cat);
break;
case (DB_C_TYPE_STRING):
sprintf(buf2, "%s '%s' where %s = %d", buf1,
Values[i].str1, Fi->key, Values[i].cat);
break;
case (DB_C_TYPE_DATETIME):
sprintf(buf2, "%s '%s' where %s = %d", buf1,
Values[i].str1, Fi->key, Values[i].cat);
break;
}
}
}
G_debug(3, "SQL: %s", buf2);
db_set_string(&stmt, buf2);
/* category exist in DB table ? */
cex = (int *)bsearch((void *)&fcat, catexst, vstat.select, sizeof(int),
srch);
if (options.option == O_CAT) {
if (cex == NULL) { /* cat does not exist in DB */
upd = 1;
vstat.notexist++;
}
else { /* cat exists in DB */
G_warning(_("Record (cat %d) already exists (not inserted)"),
fcat);
upd = 0;
vstat.exist++;
}
}
else {
if (cex == NULL) { /* cat does not exist in DB */
G_warning(_("Record (cat %d) does not exist (not updated)"),
fcat);
upd = 0;
vstat.notexist++;
}
else { /* cat exists in DB */
upd = 1;
vstat.exist++;
}
}
if (upd == 1) {
if (options.sql) {
fprintf(stdout, "%s\n", db_get_string(&stmt));
}
else {
if (db_execute_immediate(driver, &stmt) == DB_OK) {
vstat.update++;
}
else {
vstat.error++;
}
}
}
}
G_percent(1, 1, 1);
db_commit_transaction(driver);
G_free(catexst);
db_close_database_shutdown_driver(driver);
db_free_string(&stmt);
return 0;
}
/*!
\brief transform 3d vector features to 2d (z-coordinate is omitted)
\param In input vector
\param Out output vector
\param type feature type to be transformed
\param field layer number
\param zcolumn attribute column where to store height
\return number of writen features
\return -1 on error
*/
int trans3d(struct Map_info *In, struct Map_info *Out, int type,
const char *field_name, const char *zcolumn)
{
int ltype, line;
int ctype;
int field;
struct line_pnts *Points;
struct line_cats *Cats;
struct field_info *Fi;
dbDriver *driver;
dbString stmt;
char buf[2000];
int ncats, *cats, cat, *cex;
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
db_init_string(&stmt);
field = Vect_get_field_number(In, field_name);
if (zcolumn) {
Fi = Vect_get_field(Out, field);
if (!Fi) {
G_warning(_("Database connection not defined for layer <%s>"),
field_name);
return -1;
}
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (!driver) {
G_warning(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
return -1;
}
/* column type must numeric */
ctype = db_column_Ctype(driver, Fi->table, zcolumn);
if (ctype == -1) {
G_warning(_("Column <%s> not found in table <%s>"),
zcolumn, Fi->table);
return -1;
}
if (ctype != DB_C_TYPE_INT && ctype != DB_C_TYPE_DOUBLE) {
G_warning(_("Column must be numeric"));
return -1;
}
db_begin_transaction(driver);
/* select existing categories (layer) to array (array is sorted) */
ncats = db_select_int(driver, Fi->table, Fi->key, NULL, &cats);
G_debug(3, "Existing categories: %d", ncats);
}
line = 1;
while (1) {
ltype = Vect_read_next_line(In, Points, Cats);
if (ltype == -1) {
G_warning(_("Unable to read vector map"));
return -1;
}
if (ltype == -2) { /* EOF */
break;
}
if (G_verbose() > G_verbose_min() && (line - 1) % 1000 == 0) {
fprintf(stderr, "%7d\b\b\b\b\b\b\b", (line - 1));
}
if (!(ltype & type))
continue;
if (field != -1 && !Vect_cat_get(Cats, field, &cat))
continue;
/* get first cat */
if (cat == -1) {
G_warning(_("Feature id %d has no category - skipping"), line);
}
else if (Cats->n_cats > 1) {
G_warning(_("Feature id %d has more categories. "
"Using category %d."), line, field, cat);
}
if (zcolumn && ltype == GV_POINT && cat > -1) {
/* category exist in table ? */
cex = (int *)bsearch((void *)&cat, cats, ncats, sizeof(int),
srch);
/* store height to the attribute table */
if (ctype == DB_C_TYPE_INT)
sprintf(buf, "update %s set %s = %d where cat = %d",
Fi->table, zcolumn, (int)Points->z[0], cat);
else /* double */
sprintf(buf, "update %s set %s = %.8f where cat = %d",
Fi->table, zcolumn, Points->z[0], cat);
G_debug(3, "SQL: %s", buf);
db_set_string(&stmt, buf);
if (cex) {
if (db_execute_immediate(driver, &stmt) == DB_OK) {
/* TODO */
}
}
else { /* cat does not exist in table */
G_warning(_("Record (cat %d) does not exist (not updated)"),
cat);
}
}
Vect_write_line(Out, ltype, Points, Cats);
line++;
}
if (G_verbose() > G_verbose_min())
fprintf(stderr, "\r");
if (zcolumn) {
db_commit_transaction(driver);
G_free(cats);
db_close_database_shutdown_driver(driver);
db_free_string(&stmt);
}
Vect_destroy_line_struct(Points);
Vect_destroy_cats_struct(Cats);
return line - 1;
}
int main(int argc, char *argv[])
{
struct GModule *module;
struct Option *in_opt, *out_opt, *feature_opt, *column_name;
struct Flag *smooth_flg, *value_flg, *z_flg, *no_topol;
int feature;
G_gisinit(argv[0]);
module = G_define_module();
G_add_keyword(_("raster"));
G_add_keyword(_("conversion"));
G_add_keyword(_("geometry"));
G_add_keyword(_("vectorization"));
module->description = _("Converts a raster map into a vector map.");
in_opt = G_define_standard_option(G_OPT_R_INPUT);
out_opt = G_define_standard_option(G_OPT_V_OUTPUT);
feature_opt = G_define_standard_option(G_OPT_V_TYPE);
feature_opt->required = YES;
feature_opt->multiple = NO;
feature_opt->options = "point,line,area";
feature_opt->answer = NULL;
column_name = G_define_standard_option(G_OPT_DB_COLUMN);
column_name->label = _("Name of attribute column to store value");
column_name->description = _("Name must be SQL compliant");
column_name->answer = "value";
smooth_flg = G_define_flag();
smooth_flg->key = 's';
smooth_flg->description = _("Smooth corners of area features");
value_flg = G_define_flag();
value_flg->key = 'v';
value_flg->description =
_("Use raster values as categories instead of unique sequence (CELL only)");
value_flg->guisection = _("Attributes");
z_flg = G_define_flag();
z_flg->key = 'z';
z_flg->label = _("Write raster values as z coordinate");
z_flg->description = _("Table is not created. "
"Currently supported only for points.");
z_flg->guisection = _("Attributes");
no_topol = G_define_flag();
no_topol->key = 'b';
no_topol->label = _("Do not build vector topology");
no_topol->description = _("Recommended for massive point conversion");
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
feature = Vect_option_to_types(feature_opt);
smooth_flag = (smooth_flg->answer) ? SMOOTH : NO_SMOOTH;
value_flag = value_flg->answer;
if (z_flg->answer && (feature != GV_POINT))
G_fatal_error(_("z flag is supported only for points"));
/* Open files */
input_fd = Rast_open_old(in_opt->answer, "");
data_type = Rast_get_map_type(input_fd);
data_size = Rast_cell_size(data_type);
G_get_window(&cell_head);
if (value_flag && data_type != CELL_TYPE) {
G_warning(_("Raster is not CELL, '-v' flag ignored, raster values will be written to the table."));
value_flag = 0;
}
if (z_flg->answer)
Vect_open_new(&Map, out_opt->answer, 1);
else
Vect_open_new(&Map, out_opt->answer, 0);
Vect_hist_command(&Map);
Cats = Vect_new_cats_struct();
/* Open category labels */
if (data_type == CELL_TYPE) {
if (0 == Rast_read_cats(in_opt->answer, "", &RastCats))
has_cats = 1;
}
else
has_cats = 0;
db_init_string(&sql);
db_init_string(&label);
/* Create table */
if ((feature & (GV_AREA | GV_POINT | GV_LINE)) &&
(!value_flag || (value_flag && has_cats)) && !(z_flg->answer)) {
char buf[1000];
Fi = Vect_default_field_info(&Map, 1, NULL, GV_1TABLE);
Vect_map_add_dblink(&Map, 1, NULL, Fi->table, GV_KEY_COLUMN, Fi->database,
Fi->driver);
driver =
db_start_driver_open_database(Fi->driver,
Vect_subst_var(Fi->database, &Map));
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
/* Create new table */
db_zero_string(&sql);
sprintf(buf, "create table %s ( cat integer", Fi->table);
db_append_string(&sql, buf);
if (!value_flag) { /* add value to the table */
if (data_type == CELL_TYPE) {
db_append_string(&sql, ", ");
db_append_string(&sql, column_name->answer);
db_append_string(&sql, " integer");
} else {
db_append_string(&sql, ",");
db_append_string(&sql, column_name->answer);
db_append_string(&sql, " double precision");
}
}
if (has_cats) {
int i, len;
int clen = 0;
/* Get maximum column length */
for (i = 0; i < RastCats.ncats; i++) {
len = strlen(RastCats.labels[i]);
if (len > clen)
clen = len;
}
clen += 10;
sprintf(buf, ", label varchar(%d)", clen);
db_append_string(&sql, buf);
}
db_append_string(&sql, ")");
G_debug(3, db_get_string(&sql));
if (db_execute_immediate(driver, &sql) != DB_OK)
G_fatal_error(_("Unable to create table: %s"),
db_get_string(&sql));
if (db_create_index2(driver, Fi->table, GV_KEY_COLUMN) != DB_OK)
G_warning(_("Unable to create index"));
if (db_grant_on_table
(driver, Fi->table, DB_PRIV_SELECT,
DB_GROUP | DB_PUBLIC) != DB_OK)
G_fatal_error(_("Unable to grant privileges on table <%s>"),
Fi->table);
db_begin_transaction(driver);
}
else {
driver = NULL;
}
/* init variables for lines and areas */
first_read = 1;
last_read = 0;
direction = FORWARD;
row_length = cell_head.cols;
n_rows = cell_head.rows;
row_count = 0;
if (feature == GV_LINE) {
alloc_lines_bufs(row_length + 2);
extract_lines();
}
else if (feature == GV_AREA) {
alloc_areas_bufs(row_length + 2);
extract_areas();
}
else { /* GV_POINT */
extract_points(z_flg->answer);
}
Rast_close(input_fd);
if (!no_topol->answer)
Vect_build(&Map);
/* insert cats and optionally labels if raster cats were used */
if (driver && value_flag) {
char buf[1000];
int c, i, cat, fidx, ncats, lastcat, tp, id;
fidx = Vect_cidx_get_field_index(&Map, 1);
if (fidx >= 0) {
ncats = Vect_cidx_get_num_cats_by_index(&Map, fidx);
lastcat = -1;
for (c = 0; c < ncats; c++) {
Vect_cidx_get_cat_by_index(&Map, fidx, c, &cat, &tp, &id);
if (lastcat == cat)
continue;
/* find label, slow -> TODO faster */
db_set_string(&label, "");
for (i = 0; i < RastCats.ncats; i++) {
if (cat == (int)RastCats.q.table[i].dLow) { /* cats are in dLow/High not in cLow/High !!! */
db_set_string(&label, RastCats.labels[i]);
db_double_quote_string(&label);
break;
}
}
G_debug(3, "cat = %d label = %s", cat, db_get_string(&label));
sprintf(buf, "insert into %s values ( %d, '%s')", Fi->table,
cat, db_get_string(&label));
db_set_string(&sql, buf);
G_debug(3, db_get_string(&sql));
if (db_execute_immediate(driver, &sql) != DB_OK)
G_fatal_error(_("Unable to insert into table: %s"),
db_get_string(&sql));
lastcat = cat;
}
}
}
if (has_cats)
Rast_free_cats(&RastCats);
if (driver != NULL) {
db_commit_transaction(driver);
db_close_database_shutdown_driver(driver);
}
Vect_close(&Map);
G_done_msg(" ");
exit(EXIT_SUCCESS);
}
int main(int argc, char *argv[])
{
struct Map_info In, Out;
static struct line_pnts *Points;
struct line_cats *Cats;
struct GModule *module; /* GRASS module for parsing arguments */
struct Option *map_in, *map_out;
struct Option *method_opt, *afield_opt, *nfield_opt, *abcol,
*afcol, *ncol;
struct Flag *add_f;
int with_z;
int afield, nfield, mask_type;
dglGraph_s *graph;
int *component, nnodes, type, i, nlines, components, max_cat;
char buf[2000], *covered;
char *desc;
/* Attribute table */
dbString sql;
dbDriver *driver;
struct field_info *Fi;
/* initialize GIS environment */
G_gisinit(argv[0]); /* reads grass env, stores program name to G_program_name() */
/* initialize module */
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("network"));
G_add_keyword(_("components"));
module->description =
_("Computes strongly and weakly connected components in the network.");
/* Define the different options as defined in gis.h */
map_in = G_define_standard_option(G_OPT_V_INPUT);
afield_opt = G_define_standard_option(G_OPT_V_FIELD);
afield_opt->key = "arc_layer";
afield_opt->answer = "1";
afield_opt->label = _("Arc layer");
afield_opt->guisection = _("Cost");
nfield_opt = G_define_standard_option(G_OPT_V_FIELD);
nfield_opt->key = "node_layer";
nfield_opt->answer = "2";
nfield_opt->label = _("Node layer");
nfield_opt->guisection = _("Cost");
afcol = G_define_standard_option(G_OPT_DB_COLUMN);
afcol->key = "arc_column";
afcol->required = NO;
afcol->description =
_("Arc forward/both direction(s) cost column (number)");
afcol->guisection = _("Cost");
abcol = G_define_standard_option(G_OPT_DB_COLUMN);
abcol->key = "arc_backward_column";
abcol->required = NO;
abcol->description = _("Arc backward direction cost column (number)");
abcol->guisection = _("Cost");
ncol = G_define_option();
ncol->key = "node_column";
ncol->type = TYPE_STRING;
ncol->required = NO;
ncol->description = _("Node cost column (number)");
ncol->guisection = _("Cost");
map_out = G_define_standard_option(G_OPT_V_OUTPUT);
method_opt = G_define_option();
method_opt->key = "method";
method_opt->type = TYPE_STRING;
method_opt->required = YES;
method_opt->multiple = NO;
method_opt->options = "weak,strong";
desc = NULL;
G_asprintf(&desc,
"weak;%s;strong;%s",
_("Weakly connected components"),
_("Strongly connected components"));
method_opt->descriptions = desc;
method_opt->description = _("Type of components");
add_f = G_define_flag();
add_f->key = 'a';
add_f->description = _("Add points on nodes");
/* options and flags parser */
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
/* TODO: make an option for this */
mask_type = GV_LINE | GV_BOUNDARY;
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
Vect_check_input_output_name(map_in->answer, map_out->answer,
G_FATAL_EXIT);
Vect_set_open_level(2);
if (1 > Vect_open_old(&In, map_in->answer, ""))
G_fatal_error(_("Unable to open vector map <%s>"), map_in->answer);
with_z = Vect_is_3d(&In);
if (0 > Vect_open_new(&Out, map_out->answer, with_z)) {
Vect_close(&In);
G_fatal_error(_("Unable to create vector map <%s>"), map_out->answer);
}
/* parse filter option and select appropriate lines */
afield = Vect_get_field_number(&In, afield_opt->answer);
nfield = Vect_get_field_number(&In, nfield_opt->answer);
if (0 != Vect_net_build_graph(&In, mask_type, afield, nfield, afcol->answer,
abcol->answer, ncol->answer, 0, 2))
G_fatal_error(_("Unable to build graph for vector map <%s>"), Vect_get_full_name(&In));
graph = Vect_net_get_graph(&In);
nnodes = Vect_get_num_nodes(&In);
component = (int *)G_calloc(nnodes + 1, sizeof(int));
covered = (char *)G_calloc(nnodes + 1, sizeof(char));
if (!component || !covered) {
G_fatal_error(_("Out of memory"));
exit(EXIT_FAILURE);
}
/* Create table */
Fi = Vect_default_field_info(&Out, 1, NULL, GV_1TABLE);
Vect_map_add_dblink(&Out, 1, NULL, Fi->table, GV_KEY_COLUMN, Fi->database,
Fi->driver);
db_init_string(&sql);
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
sprintf(buf, "create table %s ( cat integer, comp integer)", Fi->table);
db_set_string(&sql, buf);
G_debug(2, "%s", db_get_string(&sql));
if (db_execute_immediate(driver, &sql) != DB_OK) {
db_close_database_shutdown_driver(driver);
G_fatal_error(_("Unable to create table: '%s'"), db_get_string(&sql));
}
if (db_create_index2(driver, Fi->table, GV_KEY_COLUMN) != DB_OK)
G_warning(_("Cannot create index"));
if (db_grant_on_table
(driver, Fi->table, DB_PRIV_SELECT, DB_GROUP | DB_PUBLIC) != DB_OK)
G_fatal_error(_("Cannot grant privileges on table <%s>"), Fi->table);
db_begin_transaction(driver);
if (method_opt->answer[0] == 'w') {
G_message(_("Computing weakly connected components..."));
components = NetA_weakly_connected_components(graph, component);
}
else {
G_message(_("Computing strongly connected components..."));
components = NetA_strongly_connected_components(graph, component);
}
G_debug(3, "Components: %d", components);
G_message(_("Writing output..."));
Vect_copy_head_data(&In, &Out);
Vect_hist_copy(&In, &Out);
Vect_hist_command(&Out);
nlines = Vect_get_num_lines(&In);
max_cat = 1;
G_percent(0, nlines, 4);
for (i = 1; i <= nlines; i++) {
int comp, cat;
G_percent(i, nlines, 4);
type = Vect_read_line(&In, Points, Cats, i);
if (!Vect_cat_get(Cats, afield, &cat))
continue;
if (type == GV_LINE || type == GV_BOUNDARY) {
int node1, node2;
Vect_get_line_nodes(&In, i, &node1, &node2);
if (component[node1] == component[node2]) {
comp = component[node1];
}
else {
continue;
}
}
else if (type == GV_POINT) {
int node;
/* Vect_get_line_nodes(&In, i, &node, NULL); */
node = Vect_find_node(&In, Points->x[0], Points->y[0], Points->z[0], 0, 0);
if (!node)
continue;
comp = component[node];
covered[node] = 1;
}
else
continue;
cat = max_cat++;
Vect_reset_cats(Cats);
Vect_cat_set(Cats, 1, cat);
Vect_write_line(&Out, type, Points, Cats);
insert_new_record(driver, Fi, &sql, cat, comp);
}
/*add points on nodes not covered by any point in the network */
if (add_f->answer) {
for (i = 1; i <= nnodes; i++)
if (!covered[i]) {
Vect_reset_cats(Cats);
Vect_cat_set(Cats, 1, max_cat);
NetA_add_point_on_node(&In, &Out, i, Cats);
insert_new_record(driver, Fi, &sql, max_cat++, component[i]);
}
}
db_commit_transaction(driver);
db_close_database_shutdown_driver(driver);
Vect_close(&In);
Vect_build(&Out);
Vect_close(&Out);
G_done_msg(_("Found %d components."), components);
exit(EXIT_SUCCESS);
}
int main(int argc, char *argv[])
{
struct Map_info In, Out, Buf;
struct line_pnts *Points;
struct line_cats *Cats, *BCats;
char bufname[GNAME_MAX];
struct GModule *module;
struct Option *in_opt, *out_opt, *type_opt, *dista_opt, *distb_opt,
*angle_opt;
struct Flag *straight_flag, *nocaps_flag;
struct Option *tol_opt, *bufcol_opt, *scale_opt, *field_opt;
int verbose;
double da, db, dalpha, tolerance, unit_tolerance;
int type;
int i, ret, nareas, area, nlines, line;
char *Areas, *Lines;
int field;
struct buf_contours *arr_bc;
struct buf_contours_pts arr_bc_pts;
int buffers_count = 0, line_id;
struct spatial_index si;
struct bound_box bbox;
/* Attributes if sizecol is used */
int nrec, ctype;
struct field_info *Fi;
dbDriver *Driver;
dbCatValArray cvarr;
double size_val, scale;
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("geometry"));
G_add_keyword(_("buffer"));
module->description =
_("Creates a buffer around vector features of given type.");
in_opt = G_define_standard_option(G_OPT_V_INPUT);
field_opt = G_define_standard_option(G_OPT_V_FIELD_ALL);
field_opt->guisection = _("Selection");
type_opt = G_define_standard_option(G_OPT_V_TYPE);
type_opt->options = "point,line,boundary,centroid,area";
type_opt->answer = "point,line,area";
type_opt->guisection = _("Selection");
out_opt = G_define_standard_option(G_OPT_V_OUTPUT);
dista_opt = G_define_option();
dista_opt->key = "distance";
dista_opt->type = TYPE_DOUBLE;
dista_opt->required = NO;
dista_opt->description =
_("Buffer distance along major axis in map units");
dista_opt->guisection = _("Distance");
distb_opt = G_define_option();
distb_opt->key = "minordistance";
distb_opt->type = TYPE_DOUBLE;
distb_opt->required = NO;
distb_opt->description =
_("Buffer distance along minor axis in map units");
distb_opt->guisection = _("Distance");
angle_opt = G_define_option();
angle_opt->key = "angle";
angle_opt->type = TYPE_DOUBLE;
angle_opt->required = NO;
angle_opt->answer = "0";
angle_opt->description = _("Angle of major axis in degrees");
angle_opt->guisection = _("Distance");
bufcol_opt = G_define_standard_option(G_OPT_DB_COLUMN);
bufcol_opt->key = "bufcolumn";
bufcol_opt->description =
_("Name of column to use for buffer distances");
bufcol_opt->guisection = _("Distance");
scale_opt = G_define_option();
scale_opt->key = "scale";
scale_opt->type = TYPE_DOUBLE;
scale_opt->required = NO;
scale_opt->answer = "1.0";
scale_opt->description = _("Scaling factor for attribute column values");
scale_opt->guisection = _("Distance");
tol_opt = G_define_option();
tol_opt->key = "tolerance";
tol_opt->type = TYPE_DOUBLE;
tol_opt->required = NO;
tol_opt->answer = "0.01";
tol_opt->description =
_("Maximum distance between theoretical arc and polygon segments as multiple of buffer");
tol_opt->guisection = _("Distance");
straight_flag = G_define_flag();
straight_flag->key = 's';
straight_flag->description = _("Make outside corners straight");
nocaps_flag = G_define_flag();
nocaps_flag->key = 'c';
nocaps_flag->description = _("Don't make caps at the ends of polylines");
G_gisinit(argv[0]);
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
type = Vect_option_to_types(type_opt);
if ((dista_opt->answer && bufcol_opt->answer) ||
(!(dista_opt->answer || bufcol_opt->answer)))
G_fatal_error(_("Select a buffer distance/minordistance/angle "
"or column, but not both."));
if (bufcol_opt->answer)
G_warning(_("The bufcol option may contain bugs during the cleaning "
"step. If you encounter problems, use the debug "
"option or clean manually with v.clean tool=break; "
"v.category step=0; v.extract -d type=area"));
if (field_opt->answer)
field = Vect_get_field_number(&In, field_opt->answer);
else
field = -1;
if (bufcol_opt->answer && field == -1)
G_fatal_error(_("The bufcol option requires a valid layer."));
tolerance = atof(tol_opt->answer);
if (tolerance <= 0)
G_fatal_error(_("The tolerance must be > 0."));
if (adjust_tolerance(&tolerance))
G_warning(_("The tolerance was reset to %g"), tolerance);
scale = atof(scale_opt->answer);
if (scale <= 0.0)
G_fatal_error("Illegal scale value");
da = db = dalpha = 0;
if (dista_opt->answer) {
da = atof(dista_opt->answer);
if (distb_opt->answer)
db = atof(distb_opt->answer);
else
db = da;
if (angle_opt->answer)
dalpha = atof(angle_opt->answer);
else
dalpha = 0;
unit_tolerance = tolerance * MIN(da, db);
G_verbose_message(_("The tolerance in map units = %g"), unit_tolerance);
}
Vect_check_input_output_name(in_opt->answer, out_opt->answer,
GV_FATAL_EXIT);
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
BCats = Vect_new_cats_struct();
Vect_set_open_level(2); /* topology required */
if (1 > Vect_open_old2(&In, in_opt->answer, "", field_opt->answer))
G_fatal_error(_("Unable to open vector map <%s>"), in_opt->answer);
if (0 > Vect_open_new(&Out, out_opt->answer, WITHOUT_Z)) {
Vect_close(&In);
G_fatal_error(_("Unable to create vector map <%s>"), out_opt->answer);
}
/* open tmp vector for buffers, needed for cleaning */
sprintf(bufname, "%s_tmp_%d", out_opt->answer, getpid());
if (0 > Vect_open_new(&Buf, bufname, 0)) {
Vect_close(&In);
Vect_close(&Out);
Vect_delete(out_opt->answer);
exit(EXIT_FAILURE);
}
Vect_build_partial(&Buf, GV_BUILD_BASE);
/* check and load attribute column data */
if (bufcol_opt->answer) {
db_CatValArray_init(&cvarr);
Fi = Vect_get_field(&In, field);
if (Fi == NULL)
G_fatal_error(_("Database connection not defined for layer %d"),
field);
Driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (Driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
/* Note do not check if the column exists in the table because it may be expression */
/* TODO: only select values we need instead of all in column */
nrec =
db_select_CatValArray(Driver, Fi->table, Fi->key,
bufcol_opt->answer, NULL, &cvarr);
if (nrec < 0)
G_fatal_error(_("Unable to select data from table <%s>"),
Fi->table);
G_debug(2, "%d records selected from table", nrec);
ctype = cvarr.ctype;
if (ctype != DB_C_TYPE_INT && ctype != DB_C_TYPE_DOUBLE)
G_fatal_error(_("Column type not supported"));
db_close_database_shutdown_driver(Driver);
/* Output cats/values list */
for (i = 0; i < cvarr.n_values; i++) {
if (ctype == DB_C_TYPE_INT) {
G_debug(4, "cat = %d val = %d", cvarr.value[i].cat,
cvarr.value[i].val.i);
}
else if (ctype == DB_C_TYPE_DOUBLE) {
G_debug(4, "cat = %d val = %f", cvarr.value[i].cat,
cvarr.value[i].val.d);
}
}
}
Vect_copy_head_data(&In, &Out);
Vect_hist_copy(&In, &Out);
Vect_hist_command(&Out);
/* Create buffers' boundaries */
nlines = nareas = 0;
if ((type & GV_POINTS) || (type & GV_LINES))
nlines += Vect_get_num_primitives(&In, type);
if (type & GV_AREA)
nareas = Vect_get_num_areas(&In);
if (nlines + nareas == 0) {
G_warning(_("No features available for buffering. "
"Check type option and features available in the input vector."));
exit(EXIT_SUCCESS);
}
buffers_count = 1;
arr_bc = G_malloc((nlines + nareas + 1) * sizeof(struct buf_contours));
Vect_spatial_index_init(&si, 0);
/* Lines (and Points) */
if ((type & GV_POINTS) || (type & GV_LINES)) {
int ltype;
if (nlines > 0)
G_message(_("Buffering lines..."));
for (line = 1; line <= nlines; line++) {
int cat;
G_debug(2, "line = %d", line);
G_percent(line, nlines, 2);
if (!Vect_line_alive(&In, line))
continue;
ltype = Vect_read_line(&In, Points, Cats, line);
if (!(ltype & type))
continue;
if (field > 0 && !Vect_cat_get(Cats, field, &cat))
continue;
if (bufcol_opt->answer) {
ret = db_CatValArray_get_value_di(&cvarr, cat, &size_val);
if (ret != DB_OK) {
G_warning(_("No record for category %d in table <%s>"),
cat, Fi->table);
continue;
}
if (size_val < 0.0) {
G_warning(_("Attribute is of invalid size (%.3f) for category %d"),
size_val, cat);
continue;
}
if (size_val == 0.0)
continue;
da = size_val * scale;
db = da;
dalpha = 0;
unit_tolerance = tolerance * MIN(da, db);
G_debug(2, " dynamic buffer size = %.2f", da);
G_debug(2, _("The tolerance in map units: %g"),
unit_tolerance);
}
Vect_line_prune(Points);
if (ltype & GV_POINTS || Points->n_points == 1) {
Vect_point_buffer2(Points->x[0], Points->y[0], da, db, dalpha,
!(straight_flag->answer), unit_tolerance,
&(arr_bc_pts.oPoints));
Vect_write_line(&Out, GV_BOUNDARY, arr_bc_pts.oPoints, BCats);
line_id = Vect_write_line(&Buf, GV_BOUNDARY, arr_bc_pts.oPoints, Cats);
Vect_destroy_line_struct(arr_bc_pts.oPoints);
/* add buffer to spatial index */
Vect_get_line_box(&Buf, line_id, &bbox);
Vect_spatial_index_add_item(&si, buffers_count, &bbox);
arr_bc[buffers_count].outer = line_id;
arr_bc[buffers_count].inner_count = 0;
arr_bc[buffers_count].inner = NULL;
buffers_count++;
}
else {
Vect_line_buffer2(Points, da, db, dalpha,
!(straight_flag->answer),
!(nocaps_flag->answer), unit_tolerance,
&(arr_bc_pts.oPoints),
&(arr_bc_pts.iPoints),
&(arr_bc_pts.inner_count));
Vect_write_line(&Out, GV_BOUNDARY, arr_bc_pts.oPoints, BCats);
line_id = Vect_write_line(&Buf, GV_BOUNDARY, arr_bc_pts.oPoints, Cats);
Vect_destroy_line_struct(arr_bc_pts.oPoints);
/* add buffer to spatial index */
Vect_get_line_box(&Buf, line_id, &bbox);
Vect_spatial_index_add_item(&si, buffers_count, &bbox);
arr_bc[buffers_count].outer = line_id;
arr_bc[buffers_count].inner_count = arr_bc_pts.inner_count;
if (arr_bc_pts.inner_count > 0) {
arr_bc[buffers_count].inner = G_malloc(arr_bc_pts.inner_count * sizeof(int));
for (i = 0; i < arr_bc_pts.inner_count; i++) {
Vect_write_line(&Out, GV_BOUNDARY, arr_bc_pts.iPoints[i], BCats);
line_id = Vect_write_line(&Buf, GV_BOUNDARY, arr_bc_pts.iPoints[i], Cats);
Vect_destroy_line_struct(arr_bc_pts.iPoints[i]);
/* add buffer to spatial index */
Vect_get_line_box(&Buf, line_id, &bbox);
Vect_spatial_index_add_item(&si, buffers_count, &bbox);
arr_bc[buffers_count].inner[i] = line_id;
}
G_free(arr_bc_pts.iPoints);
}
buffers_count++;
}
}
}
/* Areas */
if (type & GV_AREA) {
int centroid;
if (nareas > 0)
G_message(_("Buffering areas..."));
for (area = 1; area <= nareas; area++) {
int cat;
G_percent(area, nareas, 2);
if (!Vect_area_alive(&In, area))
continue;
centroid = Vect_get_area_centroid(&In, area);
if (centroid == 0)
continue;
Vect_read_line(&In, NULL, Cats, centroid);
if (field > 0 && !Vect_cat_get(Cats, field, &cat))
continue;
if (bufcol_opt->answer) {
ret = db_CatValArray_get_value_di(&cvarr, cat, &size_val);
if (ret != DB_OK) {
G_warning(_("No record for category %d in table <%s>"),
cat, Fi->table);
continue;
}
if (size_val < 0.0) {
G_warning(_("Attribute is of invalid size (%.3f) for category %d"),
size_val, cat);
continue;
}
if (size_val == 0.0)
continue;
da = size_val * scale;
db = da;
dalpha = 0;
unit_tolerance = tolerance * MIN(da, db);
G_debug(2, " dynamic buffer size = %.2f", da);
G_debug(2, _("The tolerance in map units: %g"),
unit_tolerance);
}
Vect_area_buffer2(&In, area, da, db, dalpha,
!(straight_flag->answer),
!(nocaps_flag->answer), unit_tolerance,
&(arr_bc_pts.oPoints),
&(arr_bc_pts.iPoints),
&(arr_bc_pts.inner_count));
Vect_write_line(&Out, GV_BOUNDARY, arr_bc_pts.oPoints, BCats);
line_id = Vect_write_line(&Buf, GV_BOUNDARY, arr_bc_pts.oPoints, Cats);
Vect_destroy_line_struct(arr_bc_pts.oPoints);
/* add buffer to spatial index */
Vect_get_line_box(&Buf, line_id, &bbox);
Vect_spatial_index_add_item(&si, buffers_count, &bbox);
arr_bc[buffers_count].outer = line_id;
arr_bc[buffers_count].inner_count = arr_bc_pts.inner_count;
if (arr_bc_pts.inner_count > 0) {
arr_bc[buffers_count].inner = G_malloc(arr_bc_pts.inner_count * sizeof(int));
for (i = 0; i < arr_bc_pts.inner_count; i++) {
Vect_write_line(&Out, GV_BOUNDARY, arr_bc_pts.iPoints[i], BCats);
line_id = Vect_write_line(&Buf, GV_BOUNDARY, arr_bc_pts.iPoints[i], Cats);
Vect_destroy_line_struct(arr_bc_pts.iPoints[i]);
/* add buffer to spatial index */
Vect_get_line_box(&Buf, line_id, &bbox);
Vect_spatial_index_add_item(&si, buffers_count, &bbox);
arr_bc[buffers_count].inner[i] = line_id;
}
G_free(arr_bc_pts.iPoints);
}
buffers_count++;
}
}
verbose = G_verbose();
G_message(_("Cleaning buffers..."));
/* Break lines */
G_message(_("Building parts of topology..."));
Vect_build_partial(&Out, GV_BUILD_BASE);
G_message(_("Snapping boundaries..."));
Vect_snap_lines(&Out, GV_BOUNDARY, 1e-7, NULL);
G_message(_("Breaking polygons..."));
Vect_break_polygons(&Out, GV_BOUNDARY, NULL);
G_message(_("Removing duplicates..."));
Vect_remove_duplicates(&Out, GV_BOUNDARY, NULL);
do {
G_message(_("Breaking boundaries..."));
Vect_break_lines(&Out, GV_BOUNDARY, NULL);
G_message(_("Removing duplicates..."));
Vect_remove_duplicates(&Out, GV_BOUNDARY, NULL);
G_message(_("Cleaning boundaries at nodes"));
} while (Vect_clean_small_angles_at_nodes(&Out, GV_BOUNDARY, NULL) > 0);
/* Dangles and bridges don't seem to be necessary if snapping is small enough. */
/* Still needed for larger buffer distances ? */
/*
G_message(_("Removing dangles..."));
Vect_remove_dangles(&Out, GV_BOUNDARY, -1, NULL);
G_message (_("Removing bridges..."));
Vect_remove_bridges(&Out, NULL);
*/
G_message(_("Attaching islands..."));
Vect_build_partial(&Out, GV_BUILD_ATTACH_ISLES);
/* Calculate new centroids for all areas */
nareas = Vect_get_num_areas(&Out);
Areas = (char *)G_calloc(nareas + 1, sizeof(char));
G_message(_("Calculating centroids for areas..."));
G_percent(0, nareas, 2);
for (area = 1; area <= nareas; area++) {
double x, y;
G_percent(area, nareas, 2);
G_debug(3, "area = %d", area);
if (!Vect_area_alive(&Out, area))
continue;
ret = Vect_get_point_in_area(&Out, area, &x, &y);
if (ret < 0) {
G_warning(_("Cannot calculate area centroid"));
continue;
}
ret = point_in_buffer(arr_bc, &si, &Buf, x, y);
if (ret) {
G_debug(3, " -> in buffer");
Areas[area] = 1;
}
}
/* Make a list of boundaries to be deleted (both sides inside) */
nlines = Vect_get_num_lines(&Out);
G_debug(3, "nlines = %d", nlines);
Lines = (char *)G_calloc(nlines + 1, sizeof(char));
G_message(_("Generating list of boundaries to be deleted..."));
for (line = 1; line <= nlines; line++) {
int j, side[2], areas[2];
G_percent(line, nlines, 2);
G_debug(3, "line = %d", line);
if (!Vect_line_alive(&Out, line))
continue;
Vect_get_line_areas(&Out, line, &side[0], &side[1]);
for (j = 0; j < 2; j++) {
if (side[j] == 0) { /* area/isle not build */
areas[j] = 0;
}
else if (side[j] > 0) { /* area */
areas[j] = side[j];
}
else { /* < 0 -> island */
areas[j] = Vect_get_isle_area(&Out, abs(side[j]));
}
}
G_debug(3, " areas = %d , %d -> Areas = %d, %d", areas[0], areas[1],
Areas[areas[0]], Areas[areas[1]]);
if (Areas[areas[0]] && Areas[areas[1]])
Lines[line] = 1;
}
G_free(Areas);
/* Delete boundaries */
G_message(_("Deleting boundaries..."));
for (line = 1; line <= nlines; line++) {
G_percent(line, nlines, 2);
if (!Vect_line_alive(&Out, line))
continue;
if (Lines[line]) {
G_debug(3, " delete line %d", line);
Vect_delete_line(&Out, line);
}
else {
/* delete incorrect boundaries */
int side[2];
Vect_get_line_areas(&Out, line, &side[0], &side[1]);
if (!side[0] && !side[1])
Vect_delete_line(&Out, line);
}
}
G_free(Lines);
/* Create new centroids */
Vect_reset_cats(Cats);
Vect_cat_set(Cats, 1, 1);
nareas = Vect_get_num_areas(&Out);
G_message(_("Calculating centroids for areas..."));
for (area = 1; area <= nareas; area++) {
double x, y;
G_percent(area, nareas, 2);
G_debug(3, "area = %d", area);
if (!Vect_area_alive(&Out, area))
continue;
ret = Vect_get_point_in_area(&Out, area, &x, &y);
if (ret < 0) {
G_warning(_("Cannot calculate area centroid"));
continue;
}
ret = point_in_buffer(arr_bc, &si, &Buf, x, y);
if (ret) {
Vect_reset_line(Points);
Vect_append_point(Points, x, y, 0.);
Vect_write_line(&Out, GV_CENTROID, Points, Cats);
}
}
/* free arr_bc[] */
/* will only slow down the module
for (i = 0; i < buffers_count; i++) {
Vect_destroy_line_struct(arr_bc[i].oPoints);
for (j = 0; j < arr_bc[i].inner_count; j++)
Vect_destroy_line_struct(arr_bc[i].iPoints[j]);
G_free(arr_bc[i].iPoints);
} */
Vect_spatial_index_destroy(&si);
Vect_close(&Buf);
Vect_delete(bufname);
G_set_verbose(verbose);
Vect_close(&In);
Vect_build_partial(&Out, GV_BUILD_NONE);
Vect_build(&Out);
Vect_close(&Out);
exit(EXIT_SUCCESS);
}
/* *************************************************************** */
int plot1(struct Map_info *Map, int type, int area, struct cat_list *Clist,
const struct color_rgb *color, const struct color_rgb *fcolor,
int chcat, SYMBOL * Symb, int size, int id_flag,
int table_colors_flag, int cats_color_flag, char *rgb_column,
int default_width, char *width_column, double width_scale)
{
int i, ltype, nlines = 0, line, cat = -1;
double *x, *y;
struct line_pnts *Points, *PPoints;
struct line_cats *Cats;
double msize;
int x0, y0;
struct field_info *fi = NULL;
dbDriver *driver = NULL;
dbCatValArray cvarr_rgb, cvarr_width;
dbCatVal *cv_rgb = NULL, *cv_width = NULL;
int nrec_rgb = 0, nrec_width = 0;
int open_db;
int custom_rgb = FALSE;
char colorstring[12]; /* RRR:GGG:BBB */
int red, grn, blu;
RGBA_Color *line_color, *fill_color, *primary_color;
unsigned char which;
int width;
line_color = G_malloc(sizeof(RGBA_Color));
fill_color = G_malloc(sizeof(RGBA_Color));
primary_color = G_malloc(sizeof(RGBA_Color));
primary_color->a = RGBA_COLOR_OPAQUE;
/* change function prototype to pass RGBA_Color instead of color_rgb? */
if (color) {
line_color->r = color->r;
line_color->g = color->g;
line_color->b = color->b;
line_color->a = RGBA_COLOR_OPAQUE;
}
else
line_color->a = RGBA_COLOR_NONE;
if (fcolor) {
fill_color->r = fcolor->r;
fill_color->g = fcolor->g;
fill_color->b = fcolor->b;
fill_color->a = RGBA_COLOR_OPAQUE;
}
else
fill_color->a = RGBA_COLOR_NONE;
msize = size * (D_d_to_u_col(2.0) - D_d_to_u_col(1.0)); /* do it better */
Points = Vect_new_line_struct();
PPoints = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
open_db = table_colors_flag || width_column;
if (open_db) {
fi = Vect_get_field(Map, (Clist->field > 0 ? Clist->field : 1));
if (fi == NULL) {
G_fatal_error(_("Database connection not defined for layer %d"),
(Clist->field > 0 ? Clist->field : 1));
}
driver = db_start_driver_open_database(fi->driver, fi->database);
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
fi->database, fi->driver);
}
if (table_colors_flag) {
/* for reading RRR:GGG:BBB color strings from table */
if (rgb_column == NULL || *rgb_column == '\0')
G_fatal_error(_("Color definition column not specified"));
db_CatValArray_init(&cvarr_rgb);
nrec_rgb = db_select_CatValArray(driver, fi->table, fi->key,
rgb_column, NULL, &cvarr_rgb);
G_debug(3, "nrec_rgb (%s) = %d", rgb_column, nrec_rgb);
if (cvarr_rgb.ctype != DB_C_TYPE_STRING)
G_fatal_error(_("Color definition column (%s) not a string. "
"Column must be of form RRR:GGG:BBB where RGB values range 0-255."),
rgb_column);
if (nrec_rgb < 0)
G_fatal_error(_("Cannot select data (%s) from table"),
rgb_column);
G_debug(2, "\n%d records selected from table", nrec_rgb);
for (i = 0; i < cvarr_rgb.n_values; i++) {
G_debug(4, "cat = %d %s = %s", cvarr_rgb.value[i].cat,
rgb_column, db_get_string(cvarr_rgb.value[i].val.s));
}
}
if (width_column) {
if (*width_column == '\0')
G_fatal_error(_("Line width column not specified."));
db_CatValArray_init(&cvarr_width);
nrec_width = db_select_CatValArray(driver, fi->table, fi->key,
width_column, NULL, &cvarr_width);
G_debug(3, "nrec_width (%s) = %d", width_column, nrec_width);
if (cvarr_width.ctype != DB_C_TYPE_INT &&
cvarr_width.ctype != DB_C_TYPE_DOUBLE)
G_fatal_error(_("Line width column (%s) not a number."),
width_column);
if (nrec_width < 0)
G_fatal_error(_("Cannot select data (%s) from table"),
width_column);
G_debug(2, "\n%d records selected from table", nrec_width);
for (i = 0; i < cvarr_width.n_values; i++) {
G_debug(4, "cat = %d %s = %d", cvarr_width.value[i].cat,
width_column,
(cvarr_width.ctype ==
DB_C_TYPE_INT ? cvarr_width.value[i].val.
i : (int)cvarr_width.value[i].val.d));
}
}
if (open_db)
db_close_database_shutdown_driver(driver);
Vect_rewind(Map);
/* Is it necessary to reset line/label color in each loop ? */
if (color && !table_colors_flag && !cats_color_flag)
D_RGB_color(color->r, color->g, color->b);
if (Vect_level(Map) >= 2)
nlines = Vect_get_num_lines(Map);
line = 0;
while (1) {
if (Vect_level(Map) >= 2) {
line++;
if (line > nlines)
return 0;
if (!Vect_line_alive(Map, line))
continue;
ltype = Vect_read_line(Map, Points, Cats, line);
}
else {
ltype = Vect_read_next_line(Map, Points, Cats);
switch (ltype) {
case -1:
fprintf(stderr, _("\nERROR: vector map - can't read\n"));
return -1;
case -2: /* EOF */
return 0;
}
}
if (!(type & ltype))
continue;
if (chcat) {
int found = 0;
if (id_flag) { /* use line id */
if (!(Vect_cat_in_cat_list(line, Clist)))
continue;
}
else {
for (i = 0; i < Cats->n_cats; i++) {
if (Cats->field[i] == Clist->field &&
Vect_cat_in_cat_list(Cats->cat[i], Clist)) {
found = 1;
break;
}
}
if (!found)
continue;
}
}
else if (Clist->field > 0) {
int found = 0;
for (i = 0; i < Cats->n_cats; i++) {
if (Cats->field[i] == Clist->field) {
found = 1;
break;
}
}
/* lines with no category will be displayed */
if (Cats->n_cats > 0 && !found)
continue;
}
if (table_colors_flag) {
/* only first category */
cat = Vect_get_line_cat(Map, line,
(Clist->field > 0 ? Clist->field :
(Cats->n_cats >
0 ? Cats->field[0] : 1)));
if (cat >= 0) {
G_debug(3, "display element %d, cat %d", line, cat);
/* Read RGB colors from db for current area # */
if (db_CatValArray_get_value(&cvarr_rgb, cat, &cv_rgb) !=
DB_OK) {
custom_rgb = FALSE;
}
else {
sprintf(colorstring, "%s", db_get_string(cv_rgb->val.s));
if (*colorstring != '\0') {
G_debug(3, "element %d: colorstring: %s", line,
colorstring);
if (G_str_to_color(colorstring, &red, &grn, &blu) ==
1) {
custom_rgb = TRUE;
G_debug(3, "element:%d cat %d r:%d g:%d b:%d",
line, cat, red, grn, blu);
}
else {
custom_rgb = FALSE;
G_warning(_("Error in color definition column (%s), element %d "
"with cat %d: colorstring [%s]"),
rgb_column, line, cat, colorstring);
}
}
else {
custom_rgb = FALSE;
G_warning(_("Error in color definition column (%s), element %d with cat %d"),
rgb_column, line, cat);
}
}
} /* end if cat */
else {
custom_rgb = FALSE;
}
} /* end if table_colors_flag */
/* random colors */
if (cats_color_flag) {
custom_rgb = FALSE;
if (Clist->field > 0) {
cat = Vect_get_line_cat(Map, line, Clist->field);
if (cat >= 0) {
G_debug(3, "display element %d, cat %d", line, cat);
/* fetch color number from category */
which = (cat % palette_ncolors);
G_debug(3, "cat:%d which color:%d r:%d g:%d b:%d", cat,
which, palette[which].R, palette[which].G,
palette[which].B);
custom_rgb = TRUE;
red = palette[which].R;
grn = palette[which].G;
blu = palette[which].B;
}
}
else if (Cats->n_cats > 0) {
/* fetch color number from layer */
which = (Cats->field[0] % palette_ncolors);
G_debug(3, "layer:%d which color:%d r:%d g:%d b:%d",
Cats->field[0], which, palette[which].R,
palette[which].G, palette[which].B);
custom_rgb = TRUE;
red = palette[which].R;
grn = palette[which].G;
blu = palette[which].B;
}
}
if (nrec_width) {
/* only first category */
cat = Vect_get_line_cat(Map, line,
(Clist->field > 0 ? Clist->field :
(Cats->n_cats >
0 ? Cats->field[0] : 1)));
if (cat >= 0) {
G_debug(3, "display element %d, cat %d", line, cat);
/* Read line width from db for current area # */
if (db_CatValArray_get_value(&cvarr_width, cat, &cv_width) !=
DB_OK) {
width = default_width;
}
else {
width =
width_scale * (cvarr_width.ctype ==
DB_C_TYPE_INT ? cv_width->val.
i : (int)cv_width->val.d);
if (width < 0) {
G_warning(_("Error in line width column (%s), element %d "
"with cat %d: line width [%d]"),
width_column, line, cat, width);
width = default_width;
}
}
} /* end if cat */
else {
width = default_width;
}
D_line_width(width);
} /* end if nrec_width */
/* enough of the prep work, lets start plotting stuff */
x = Points->x;
y = Points->y;
if ((ltype & GV_POINTS) && Symb != NULL) {
if (!(color || fcolor || custom_rgb))
continue;
x0 = D_u_to_d_col(x[0]);
y0 = D_u_to_d_row(y[0]);
/* skip if the point is outside of the display window */
/* xy<0 tests make it go ever-so-slightly faster */
if (x0 < 0 || y0 < 0 ||
x0 > D_get_d_east() || x0 < D_get_d_west() ||
y0 > D_get_d_south() || y0 < D_get_d_north())
continue;
/* use random or RGB column color if given, otherwise reset */
/* centroids always use default color to stand out from underlying area */
if (custom_rgb && (ltype != GV_CENTROID)) {
primary_color->r = (unsigned char)red;
primary_color->g = (unsigned char)grn;
primary_color->b = (unsigned char)blu;
D_symbol2(Symb, x0, y0, primary_color, line_color);
}
else
D_symbol(Symb, x0, y0, line_color, fill_color);
}
else if (color || custom_rgb) {
if (!table_colors_flag && !cats_color_flag)
D_RGB_color(color->r, color->g, color->b);
else {
if (custom_rgb)
D_RGB_color((unsigned char)red, (unsigned char)grn,
(unsigned char)blu);
else
D_RGB_color(color->r, color->g, color->b);
}
/* Plot the lines */
if (Points->n_points == 1) /* line with one coor */
D_polydots_abs(x, y, Points->n_points);
else /*use different user defined render methods */
D_polyline_abs(x, y, Points->n_points);
}
}
Vect_destroy_line_struct(Points);
Vect_destroy_cats_struct(Cats);
return 0; /* not reached */
}
int main(int argc, char *argv[])
{
struct GModule *module;
struct _param {
struct Option *dsn, *out, *layer, *spat, *where,
*min_area;
struct Option *snap, *type, *outloc, *cnames;
} param;
struct _flag {
struct Flag *list, *tlist, *no_clean, *z, *notab,
*region;
struct Flag *over, *extend, *formats, *tolower, *no_import;
} flag;
int i, j, layer, arg_s_num, nogeom, ncnames;
float xmin, ymin, xmax, ymax;
int ncols = 0, type;
double min_area, snap;
char buf[2000], namebuf[2000], tempvect[GNAME_MAX];
char *separator;
struct Key_Value *loc_proj_info, *loc_proj_units;
struct Key_Value *proj_info, *proj_units;
struct Cell_head cellhd, loc_wind, cur_wind;
char error_msg[8192];
/* Vector */
struct Map_info Map, Tmp, *Out;
int cat;
/* Attributes */
struct field_info *Fi;
dbDriver *driver;
dbString sql, strval;
int dim, with_z;
/* OGR */
OGRDataSourceH Ogr_ds;
OGRLayerH Ogr_layer;
OGRFieldDefnH Ogr_field;
char *Ogr_fieldname;
OGRFieldType Ogr_ftype;
OGRFeatureH Ogr_feature;
OGRFeatureDefnH Ogr_featuredefn;
OGRGeometryH Ogr_geometry, Ogr_oRing, poSpatialFilter;
OGRSpatialReferenceH Ogr_projection;
OGREnvelope oExt;
OGRwkbGeometryType Ogr_geom_type;
int OFTIntegerListlength;
char *output;
char **layer_names; /* names of layers to be imported */
int *layers; /* layer indexes */
int nlayers; /* number of layers to import */
char **available_layer_names; /* names of layers to be imported */
int navailable_layers;
int layer_id;
unsigned int n_features, feature_count;
int overwrite;
double area_size;
int use_tmp_vect;
xmin = ymin = xmax = ymax = 0.0;
loc_proj_info = loc_proj_units = NULL;
Ogr_ds = Ogr_oRing = poSpatialFilter = NULL;
OFTIntegerListlength = 40; /* hack due to limitation in OGR */
area_size = 0.0;
use_tmp_vect = FALSE;
G_gisinit(argv[0]);
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("import"));
module->description = _("Converts vector data into a GRASS vector map using OGR library.");
param.dsn = G_define_option();
param.dsn->key = "dsn";
param.dsn->type = TYPE_STRING;
param.dsn->required =YES;
param.dsn->label = _("OGR datasource name");
param.dsn->description = _("Examples:\n"
"\t\tESRI Shapefile: directory containing shapefiles\n"
"\t\tMapInfo File: directory containing mapinfo files");
param.layer = G_define_option();
param.layer->key = "layer";
param.layer->type = TYPE_STRING;
param.layer->required = NO;
param.layer->multiple = YES;
param.layer->label =
_("OGR layer name. If not given, all available layers are imported");
param.layer->description =
_("Examples:\n" "\t\tESRI Shapefile: shapefile name\n"
"\t\tMapInfo File: mapinfo file name");
param.layer->guisection = _("Selection");
param.out = G_define_standard_option(G_OPT_V_OUTPUT);
param.out->required = NO;
param.out->guisection = _("Output");
param.spat = G_define_option();
param.spat->key = "spatial";
param.spat->type = TYPE_DOUBLE;
param.spat->multiple = YES;
param.spat->required = NO;
param.spat->key_desc = "xmin,ymin,xmax,ymax";
param.spat->label = _("Import subregion only");
param.spat->guisection = _("Selection");
param.spat->description =
_("Format: xmin,ymin,xmax,ymax - usually W,S,E,N");
param.where = G_define_standard_option(G_OPT_DB_WHERE);
param.where->guisection = _("Selection");
param.min_area = G_define_option();
param.min_area->key = "min_area";
param.min_area->type = TYPE_DOUBLE;
param.min_area->required = NO;
param.min_area->answer = "0.0001";
param.min_area->label =
_("Minimum size of area to be imported (square units)");
param.min_area->guisection = _("Selection");
param.min_area->description = _("Smaller areas and "
"islands are ignored. Should be greater than snap^2");
param.type = G_define_standard_option(G_OPT_V_TYPE);
param.type->options = "point,line,boundary,centroid";
param.type->answer = "";
param.type->description = _("Optionally change default input type");
param.type->descriptions =
_("point;import area centroids as points;"
"line;import area boundaries as lines;"
"boundary;import lines as area boundaries;"
"centroid;import points as centroids");
param.type->guisection = _("Selection");
param.snap = G_define_option();
param.snap->key = "snap";
param.snap->type = TYPE_DOUBLE;
param.snap->required = NO;
param.snap->answer = "-1";
param.snap->label = _("Snapping threshold for boundaries");
param.snap->description = _("'-1' for no snap");
param.outloc = G_define_option();
param.outloc->key = "location";
param.outloc->type = TYPE_STRING;
param.outloc->required = NO;
param.outloc->description = _("Name for new location to create");
param.outloc->key_desc = "name";
param.cnames = G_define_option();
param.cnames->key = "cnames";
param.cnames->type = TYPE_STRING;
param.cnames->required = NO;
param.cnames->multiple = YES;
param.cnames->description =
_("List of column names to be used instead of original names, "
"first is used for category column");
param.cnames->guisection = _("Attributes");
flag.list = G_define_flag();
flag.list->key = 'l';
flag.list->description = _("List available OGR layers in data source and exit");
flag.list->suppress_required = YES;
flag.list->guisection = _("Print");
flag.tlist = G_define_flag();
flag.tlist->key = 'a';
flag.tlist->description = _("List available OGR layers including feature types "
"in data source and exit");
flag.tlist->suppress_required = YES;
flag.tlist->guisection = _("Print");
flag.formats = G_define_flag();
flag.formats->key = 'f';
flag.formats->description = _("List supported formats and exit");
flag.formats->suppress_required = YES;
flag.formats->guisection = _("Print");
/* if using -c, you lose topological information ! */
flag.no_clean = G_define_flag();
flag.no_clean->key = 'c';
flag.no_clean->description = _("Do not clean polygons (not recommended)");
flag.no_clean->guisection = _("Output");
flag.z = G_define_flag();
flag.z->key = 'z';
flag.z->description = _("Create 3D output");
flag.z->guisection = _("Output");
flag.notab = G_define_flag();
flag.notab->key = 't';
flag.notab->description = _("Do not create attribute table");
flag.notab->guisection = _("Attributes");
flag.over = G_define_flag();
flag.over->key = 'o';
flag.over->description =
_("Override dataset projection (use location's projection)");
flag.region = G_define_flag();
flag.region->key = 'r';
flag.region->guisection = _("Selection");
flag.region->description = _("Limit import to the current region");
flag.extend = G_define_flag();
flag.extend->key = 'e';
flag.extend->description =
_("Extend location extents based on new dataset");
flag.tolower = G_define_flag();
flag.tolower->key = 'w';
flag.tolower->description =
_("Change column names to lowercase characters");
flag.tolower->guisection = _("Attributes");
flag.no_import = G_define_flag();
flag.no_import->key = 'i';
flag.no_import->description =
_("Create the location specified by the \"location\" parameter and exit."
" Do not import the vector data.");
/* The parser checks if the map already exists in current mapset, this is
* wrong if location options is used, so we switch out the check and do it
* in the module after the parser */
overwrite = G_check_overwrite(argc, argv);
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
G_begin_polygon_area_calculations(); /* Used in geom() */
OGRRegisterAll();
/* list supported formats */
if (flag.formats->answer) {
int iDriver;
G_message(_("Available OGR Drivers:"));
for (iDriver = 0; iDriver < OGRGetDriverCount(); iDriver++) {
OGRSFDriverH poDriver = OGRGetDriver(iDriver);
const char *pszRWFlag;
if (OGR_Dr_TestCapability(poDriver, ODrCCreateDataSource))
pszRWFlag = "rw";
else
pszRWFlag = "ro";
fprintf(stdout, " %s (%s): %s\n",
OGR_Dr_GetName(poDriver),
pszRWFlag, OGR_Dr_GetName(poDriver));
}
exit(EXIT_SUCCESS);
}
if (param.dsn->answer == NULL) {
G_fatal_error(_("Required parameter <%s> not set"), param.dsn->key);
}
min_area = atof(param.min_area->answer);
snap = atof(param.snap->answer);
type = Vect_option_to_types(param.type);
ncnames = 0;
if (param.cnames->answers) {
i = 0;
while (param.cnames->answers[i++]) {
ncnames++;
}
}
/* Open OGR DSN */
Ogr_ds = NULL;
if (strlen(param.dsn->answer) > 0)
Ogr_ds = OGROpen(param.dsn->answer, FALSE, NULL);
if (Ogr_ds == NULL)
G_fatal_error(_("Unable to open data source <%s>"), param.dsn->answer);
/* Make a list of available layers */
navailable_layers = OGR_DS_GetLayerCount(Ogr_ds);
available_layer_names =
(char **)G_malloc(navailable_layers * sizeof(char *));
if (flag.list->answer || flag.tlist->answer)
G_message(_("Data source <%s> (format '%s') contains %d layers:"),
param.dsn->answer,
OGR_Dr_GetName(OGR_DS_GetDriver(Ogr_ds)), navailable_layers);
for (i = 0; i < navailable_layers; i++) {
Ogr_layer = OGR_DS_GetLayer(Ogr_ds, i);
Ogr_featuredefn = OGR_L_GetLayerDefn(Ogr_layer);
Ogr_geom_type = OGR_FD_GetGeomType(Ogr_featuredefn);
available_layer_names[i] =
G_store((char *)OGR_FD_GetName(Ogr_featuredefn));
if (flag.tlist->answer)
fprintf(stdout, "%s (%s)\n", available_layer_names[i],
OGRGeometryTypeToName(Ogr_geom_type));
else if (flag.list->answer)
fprintf(stdout, "%s\n", available_layer_names[i]);
}
if (flag.list->answer || flag.tlist->answer) {
fflush(stdout);
exit(EXIT_SUCCESS);
}
/* Make a list of layers to be imported */
if (param.layer->answer) { /* From option */
nlayers = 0;
while (param.layer->answers[nlayers])
nlayers++;
layer_names = (char **)G_malloc(nlayers * sizeof(char *));
layers = (int *)G_malloc(nlayers * sizeof(int));
for (i = 0; i < nlayers; i++) {
layer_names[i] = G_store(param.layer->answers[i]);
/* Find it in the source */
layers[i] = -1;
for (j = 0; j < navailable_layers; j++) {
if (strcmp(available_layer_names[j], layer_names[i]) == 0) {
layers[i] = j;
break;
}
}
if (layers[i] == -1)
G_fatal_error(_("Layer <%s> not available"), layer_names[i]);
}
}
else { /* use list of all layers */
nlayers = navailable_layers;
layer_names = available_layer_names;
layers = (int *)G_malloc(nlayers * sizeof(int));
for (i = 0; i < nlayers; i++)
layers[i] = i;
}
if (param.out->answer) {
output = G_store(param.out->answer);
}
else {
if (nlayers < 1)
G_fatal_error(_("No OGR layers available"));
output = G_store(layer_names[0]);
G_message(_("All available OGR layers will be imported into vector map <%s>"), output);
}
if (!param.outloc->answer) { /* Check if the map exists */
if (G_find_vector2(output, G_mapset()) && !overwrite)
G_fatal_error(_("Vector map <%s> already exists"),
output);
}
/* Get first imported layer to use for extents and projection check */
Ogr_layer = OGR_DS_GetLayer(Ogr_ds, layers[0]);
if (flag.region->answer) {
if (param.spat->answer)
G_fatal_error(_("Select either the current region flag or the spatial option, not both"));
G_get_window(&cur_wind);
xmin = cur_wind.west;
xmax = cur_wind.east;
ymin = cur_wind.south;
ymax = cur_wind.north;
}
if (param.spat->answer) {
/* See as reference: gdal/ogr/ogr_capi_test.c */
/* cut out a piece of the map */
/* order: xmin,ymin,xmax,ymax */
arg_s_num = 0;
i = 0;
while (param.spat->answers[i]) {
if (i == 0)
xmin = atof(param.spat->answers[i]);
if (i == 1)
ymin = atof(param.spat->answers[i]);
if (i == 2)
xmax = atof(param.spat->answers[i]);
if (i == 3)
ymax = atof(param.spat->answers[i]);
arg_s_num++;
i++;
}
if (arg_s_num != 4)
G_fatal_error(_("4 parameters required for 'spatial' parameter"));
}
if (param.spat->answer || flag.region->answer) {
G_debug(2, "cut out with boundaries: xmin:%f ymin:%f xmax:%f ymax:%f",
xmin, ymin, xmax, ymax);
/* in theory this could be an irregular polygon */
poSpatialFilter = OGR_G_CreateGeometry(wkbPolygon);
Ogr_oRing = OGR_G_CreateGeometry(wkbLinearRing);
OGR_G_AddPoint(Ogr_oRing, xmin, ymin, 0.0);
OGR_G_AddPoint(Ogr_oRing, xmin, ymax, 0.0);
OGR_G_AddPoint(Ogr_oRing, xmax, ymax, 0.0);
OGR_G_AddPoint(Ogr_oRing, xmax, ymin, 0.0);
OGR_G_AddPoint(Ogr_oRing, xmin, ymin, 0.0);
OGR_G_AddGeometryDirectly(poSpatialFilter, Ogr_oRing);
OGR_L_SetSpatialFilter(Ogr_layer, poSpatialFilter);
}
if (param.where->answer) {
/* select by attribute */
OGR_L_SetAttributeFilter(Ogr_layer, param.where->answer);
}
/* fetch boundaries */
if ((OGR_L_GetExtent(Ogr_layer, &oExt, 1)) == OGRERR_NONE) {
G_get_window(&cellhd);
cellhd.north = oExt.MaxY;
cellhd.south = oExt.MinY;
cellhd.west = oExt.MinX;
cellhd.east = oExt.MaxX;
cellhd.rows = 20; /* TODO - calculate useful values */
cellhd.cols = 20;
cellhd.ns_res = (cellhd.north - cellhd.south) / cellhd.rows;
cellhd.ew_res = (cellhd.east - cellhd.west) / cellhd.cols;
}
else {
cellhd.north = 1.;
cellhd.south = 0.;
cellhd.west = 0.;
cellhd.east = 1.;
cellhd.top = 1.;
cellhd.bottom = 1.;
cellhd.rows = 1;
cellhd.rows3 = 1;
cellhd.cols = 1;
cellhd.cols3 = 1;
cellhd.depths = 1;
cellhd.ns_res = 1.;
cellhd.ns_res3 = 1.;
cellhd.ew_res = 1.;
cellhd.ew_res3 = 1.;
cellhd.tb_res = 1.;
}
/* suppress boundary splitting ? */
if (flag.no_clean->answer) {
split_distance = -1.;
}
else {
split_distance = 0.;
area_size =
sqrt((cellhd.east - cellhd.west) * (cellhd.north - cellhd.south));
}
/* Fetch input map projection in GRASS form. */
proj_info = NULL;
proj_units = NULL;
Ogr_projection = OGR_L_GetSpatialRef(Ogr_layer); /* should not be freed later */
/* Do we need to create a new location? */
if (param.outloc->answer != NULL) {
/* Convert projection information non-interactively as we can't
* assume the user has a terminal open */
if (GPJ_osr_to_grass(&cellhd, &proj_info,
&proj_units, Ogr_projection, 0) < 0) {
G_fatal_error(_("Unable to convert input map projection to GRASS "
"format; cannot create new location."));
}
else {
G_make_location(param.outloc->answer, &cellhd,
proj_info, proj_units, NULL);
G_message(_("Location <%s> created"), param.outloc->answer);
}
/* If the i flag is set, clean up? and exit here */
if(flag.no_import->answer)
{
exit(EXIT_SUCCESS);
}
}
else {
int err = 0;
/* Projection only required for checking so convert non-interactively */
if (GPJ_osr_to_grass(&cellhd, &proj_info,
&proj_units, Ogr_projection, 0) < 0)
G_warning(_("Unable to convert input map projection information to "
"GRASS format for checking"));
/* Does the projection of the current location match the dataset? */
/* G_get_window seems to be unreliable if the location has been changed */
G__get_window(&loc_wind, "", "DEFAULT_WIND", "PERMANENT");
/* fetch LOCATION PROJ info */
if (loc_wind.proj != PROJECTION_XY) {
loc_proj_info = G_get_projinfo();
loc_proj_units = G_get_projunits();
}
if (flag.over->answer) {
cellhd.proj = loc_wind.proj;
cellhd.zone = loc_wind.zone;
G_message(_("Over-riding projection check"));
}
else if (loc_wind.proj != cellhd.proj
|| (err =
G_compare_projections(loc_proj_info, loc_proj_units,
proj_info, proj_units)) != TRUE) {
int i_value;
strcpy(error_msg,
_("Projection of dataset does not"
" appear to match current location.\n\n"));
/* TODO: output this info sorted by key: */
if (loc_wind.proj != cellhd.proj || err != -2) {
if (loc_proj_info != NULL) {
strcat(error_msg, _("GRASS LOCATION PROJ_INFO is:\n"));
for (i_value = 0; i_value < loc_proj_info->nitems;
i_value++)
sprintf(error_msg + strlen(error_msg), "%s: %s\n",
loc_proj_info->key[i_value],
loc_proj_info->value[i_value]);
strcat(error_msg, "\n");
}
if (proj_info != NULL) {
strcat(error_msg, _("Import dataset PROJ_INFO is:\n"));
for (i_value = 0; i_value < proj_info->nitems; i_value++)
sprintf(error_msg + strlen(error_msg), "%s: %s\n",
proj_info->key[i_value],
proj_info->value[i_value]);
}
else {
strcat(error_msg, _("Import dataset PROJ_INFO is:\n"));
if (cellhd.proj == PROJECTION_XY)
sprintf(error_msg + strlen(error_msg),
"Dataset proj = %d (unreferenced/unknown)\n",
cellhd.proj);
else if (cellhd.proj == PROJECTION_LL)
sprintf(error_msg + strlen(error_msg),
"Dataset proj = %d (lat/long)\n",
cellhd.proj);
else if (cellhd.proj == PROJECTION_UTM)
sprintf(error_msg + strlen(error_msg),
"Dataset proj = %d (UTM), zone = %d\n",
cellhd.proj, cellhd.zone);
else if (cellhd.proj == PROJECTION_SP)
sprintf(error_msg + strlen(error_msg),
"Dataset proj = %d (State Plane), zone = %d\n",
cellhd.proj, cellhd.zone);
else
sprintf(error_msg + strlen(error_msg),
"Dataset proj = %d (unknown), zone = %d\n",
cellhd.proj, cellhd.zone);
}
}
else {
if (loc_proj_units != NULL) {
strcat(error_msg, "GRASS LOCATION PROJ_UNITS is:\n");
for (i_value = 0; i_value < loc_proj_units->nitems;
i_value++)
sprintf(error_msg + strlen(error_msg), "%s: %s\n",
loc_proj_units->key[i_value],
loc_proj_units->value[i_value]);
strcat(error_msg, "\n");
}
if (proj_units != NULL) {
strcat(error_msg, "Import dataset PROJ_UNITS is:\n");
for (i_value = 0; i_value < proj_units->nitems; i_value++)
sprintf(error_msg + strlen(error_msg), "%s: %s\n",
proj_units->key[i_value],
proj_units->value[i_value]);
}
}
sprintf(error_msg + strlen(error_msg),
_("\nYou can use the -o flag to %s to override this projection check.\n"),
G_program_name());
strcat(error_msg,
_("Consider generating a new location with 'location' parameter"
" from input data set.\n"));
G_fatal_error(error_msg);
}
else {
G_message(_("Projection of input dataset and current location "
"appear to match"));
}
}
db_init_string(&sql);
db_init_string(&strval);
/* open output vector */
/* strip any @mapset from vector output name */
G_find_vector(output, G_mapset());
Vect_open_new(&Map, output, flag.z->answer != 0);
Out = ⤅
n_polygon_boundaries = 0;
if (!flag.no_clean->answer) {
/* check if we need a tmp vector */
/* estimate distance for boundary splitting --> */
for (layer = 0; layer < nlayers; layer++) {
layer_id = layers[layer];
Ogr_layer = OGR_DS_GetLayer(Ogr_ds, layer_id);
Ogr_featuredefn = OGR_L_GetLayerDefn(Ogr_layer);
n_features = feature_count = 0;
n_features = OGR_L_GetFeatureCount(Ogr_layer, 1);
OGR_L_ResetReading(Ogr_layer);
/* count polygons and isles */
G_message(_("Counting polygons for %d features (OGR layer <%s>)..."),
n_features, layer_names[layer]);
while ((Ogr_feature = OGR_L_GetNextFeature(Ogr_layer)) != NULL) {
G_percent(feature_count++, n_features, 1); /* show something happens */
/* Geometry */
Ogr_geometry = OGR_F_GetGeometryRef(Ogr_feature);
if (Ogr_geometry != NULL) {
poly_count(Ogr_geometry, (type & GV_BOUNDARY));
}
OGR_F_Destroy(Ogr_feature);
}
}
G_debug(1, "n polygon boundaries: %d", n_polygon_boundaries);
if (n_polygon_boundaries > 50) {
split_distance =
area_size / log(n_polygon_boundaries);
/* divisor is the handle: increase divisor to decrease split_distance */
split_distance = split_distance / 5.;
G_debug(1, "root of area size: %f", area_size);
G_verbose_message(_("Boundary splitting distance in map units: %G"),
split_distance);
}
/* <-- estimate distance for boundary splitting */
use_tmp_vect = n_polygon_boundaries > 0;
if (use_tmp_vect) {
/* open temporary vector, do the work in the temporary vector
* at the end copy alive lines to output vector
* in case of polygons this reduces the coor file size by a factor of 2 to 5
* only needed when cleaning polygons */
sprintf(tempvect, "%s_tmp", output);
G_verbose_message(_("Using temporary vector <%s>"), tempvect);
Vect_open_new(&Tmp, tempvect, flag.z->answer != 0);
Out = &Tmp;
}
}
Vect_hist_command(&Map);
/* Points and lines are written immediately with categories. Boundaries of polygons are
* written to the vector then cleaned and centroids are calculated for all areas in cleaan vector.
* Then second pass through finds all centroids in each polygon feature and adds its category
* to the centroid. The result is that one centroids may have 0, 1 ore more categories
* of one ore more (more input layers) fields. */
with_z = 0;
for (layer = 0; layer < nlayers; layer++) {
layer_id = layers[layer];
Ogr_layer = OGR_DS_GetLayer(Ogr_ds, layer_id);
Ogr_featuredefn = OGR_L_GetLayerDefn(Ogr_layer);
/* Add DB link */
if (!flag.notab->answer) {
char *cat_col_name = GV_KEY_COLUMN;
if (nlayers == 1) { /* one layer only */
Fi = Vect_default_field_info(&Map, layer + 1, NULL,
GV_1TABLE);
}
else {
Fi = Vect_default_field_info(&Map, layer + 1, NULL,
GV_MTABLE);
}
if (ncnames > 0) {
cat_col_name = param.cnames->answers[0];
}
Vect_map_add_dblink(&Map, layer + 1, layer_names[layer], Fi->table,
cat_col_name, Fi->database, Fi->driver);
ncols = OGR_FD_GetFieldCount(Ogr_featuredefn);
G_debug(2, "%d columns", ncols);
/* Create table */
sprintf(buf, "create table %s (%s integer", Fi->table,
cat_col_name);
db_set_string(&sql, buf);
for (i = 0; i < ncols; i++) {
Ogr_field = OGR_FD_GetFieldDefn(Ogr_featuredefn, i);
Ogr_ftype = OGR_Fld_GetType(Ogr_field);
G_debug(3, "Ogr_ftype: %i", Ogr_ftype); /* look up below */
if (i < ncnames - 1) {
Ogr_fieldname = G_store(param.cnames->answers[i + 1]);
}
else {
/* Change column names to [A-Za-z][A-Za-z0-9_]* */
Ogr_fieldname = G_store(OGR_Fld_GetNameRef(Ogr_field));
G_debug(3, "Ogr_fieldname: '%s'", Ogr_fieldname);
G_str_to_sql(Ogr_fieldname);
G_debug(3, "Ogr_fieldname: '%s'", Ogr_fieldname);
}
/* avoid that we get the 'cat' column twice */
if (strcmp(Ogr_fieldname, GV_KEY_COLUMN) == 0) {
sprintf(namebuf, "%s_", Ogr_fieldname);
Ogr_fieldname = G_store(namebuf);
}
/* captial column names are a pain in SQL */
if (flag.tolower->answer)
G_str_to_lower(Ogr_fieldname);
if (strcmp(OGR_Fld_GetNameRef(Ogr_field), Ogr_fieldname) != 0) {
G_warning(_("Column name changed: '%s' -> '%s'"),
OGR_Fld_GetNameRef(Ogr_field), Ogr_fieldname);
}
/** Simple 32bit integer OFTInteger = 0 **/
/** List of 32bit integers OFTIntegerList = 1 **/
/** Double Precision floating point OFTReal = 2 **/
/** List of doubles OFTRealList = 3 **/
/** String of ASCII chars OFTString = 4 **/
/** Array of strings OFTStringList = 5 **/
/** Double byte string (unsupported) OFTWideString = 6 **/
/** List of wide strings (unsupported) OFTWideStringList = 7 **/
/** Raw Binary data (unsupported) OFTBinary = 8 **/
/** OFTDate = 9 **/
/** OFTTime = 10 **/
/** OFTDateTime = 11 **/
if (Ogr_ftype == OFTInteger) {
sprintf(buf, ", %s integer", Ogr_fieldname);
}
else if (Ogr_ftype == OFTIntegerList) {
/* hack: treat as string */
sprintf(buf, ", %s varchar ( %d )", Ogr_fieldname,
OFTIntegerListlength);
G_warning(_("Writing column <%s> with fixed length %d chars (may be truncated)"),
Ogr_fieldname, OFTIntegerListlength);
}
else if (Ogr_ftype == OFTReal) {
sprintf(buf, ", %s double precision", Ogr_fieldname);
#if GDAL_VERSION_NUM >= 1320
}
else if (Ogr_ftype == OFTDate) {
sprintf(buf, ", %s date", Ogr_fieldname);
}
else if (Ogr_ftype == OFTTime) {
sprintf(buf, ", %s time", Ogr_fieldname);
}
else if (Ogr_ftype == OFTDateTime) {
sprintf(buf, ", %s datetime", Ogr_fieldname);
#endif
}
else if (Ogr_ftype == OFTString) {
int fwidth;
fwidth = OGR_Fld_GetWidth(Ogr_field);
/* TODO: read all records first and find the longest string length */
if (fwidth == 0) {
G_warning(_("Width for column %s set to 255 (was not specified by OGR), "
"some strings may be truncated!"),
Ogr_fieldname);
fwidth = 255;
}
sprintf(buf, ", %s varchar ( %d )", Ogr_fieldname,
fwidth);
}
else if (Ogr_ftype == OFTStringList) {
/* hack: treat as string */
sprintf(buf, ", %s varchar ( %d )", Ogr_fieldname,
OFTIntegerListlength);
G_warning(_("Writing column %s with fixed length %d chars (may be truncated)"),
Ogr_fieldname, OFTIntegerListlength);
}
else {
G_warning(_("Column type not supported (%s)"),
Ogr_fieldname);
buf[0] = 0;
}
db_append_string(&sql, buf);
G_free(Ogr_fieldname);
}
db_append_string(&sql, ")");
G_debug(3, db_get_string(&sql));
driver =
db_start_driver_open_database(Fi->driver,
Vect_subst_var(Fi->database,
&Map));
if (driver == NULL) {
G_fatal_error(_("Unable open database <%s> by driver <%s>"),
Vect_subst_var(Fi->database, &Map), Fi->driver);
}
if (db_execute_immediate(driver, &sql) != DB_OK) {
db_close_database(driver);
db_shutdown_driver(driver);
G_fatal_error(_("Unable to create table: '%s'"),
db_get_string(&sql));
}
if (db_create_index2(driver, Fi->table, cat_col_name) != DB_OK)
G_warning(_("Unable to create index for table <%s>, key <%s>"),
Fi->table, cat_col_name);
if (db_grant_on_table
(driver, Fi->table, DB_PRIV_SELECT,
DB_GROUP | DB_PUBLIC) != DB_OK)
G_fatal_error(_("Unable to grant privileges on table <%s>"),
Fi->table);
db_begin_transaction(driver);
}
/* Import feature */
cat = 1;
nogeom = 0;
OGR_L_ResetReading(Ogr_layer);
n_features = feature_count = 0;
n_features = OGR_L_GetFeatureCount(Ogr_layer, 1);
G_important_message(_("Importing %d features (OGR layer <%s>)..."),
n_features, layer_names[layer]);
while ((Ogr_feature = OGR_L_GetNextFeature(Ogr_layer)) != NULL) {
G_percent(feature_count++, n_features, 1); /* show something happens */
/* Geometry */
Ogr_geometry = OGR_F_GetGeometryRef(Ogr_feature);
if (Ogr_geometry == NULL) {
nogeom++;
}
else {
dim = OGR_G_GetCoordinateDimension(Ogr_geometry);
if (dim > 2)
with_z = 1;
geom(Ogr_geometry, Out, layer + 1, cat, min_area, type,
flag.no_clean->answer);
}
/* Attributes */
if (!flag.notab->answer) {
sprintf(buf, "insert into %s values ( %d", Fi->table, cat);
db_set_string(&sql, buf);
for (i = 0; i < ncols; i++) {
Ogr_field = OGR_FD_GetFieldDefn(Ogr_featuredefn, i);
Ogr_ftype = OGR_Fld_GetType(Ogr_field);
if (OGR_F_IsFieldSet(Ogr_feature, i)) {
if (Ogr_ftype == OFTInteger || Ogr_ftype == OFTReal) {
sprintf(buf, ", %s",
OGR_F_GetFieldAsString(Ogr_feature, i));
#if GDAL_VERSION_NUM >= 1320
/* should we use OGR_F_GetFieldAsDateTime() here ? */
}
else if (Ogr_ftype == OFTDate || Ogr_ftype == OFTTime
|| Ogr_ftype == OFTDateTime) {
char *newbuf;
db_set_string(&strval, (char *)
OGR_F_GetFieldAsString(Ogr_feature,
i));
db_double_quote_string(&strval);
sprintf(buf, ", '%s'", db_get_string(&strval));
newbuf = G_str_replace(buf, "/", "-"); /* fix 2001/10/21 to 2001-10-21 */
sprintf(buf, "%s", newbuf);
#endif
}
else if (Ogr_ftype == OFTString ||
Ogr_ftype == OFTIntegerList) {
db_set_string(&strval, (char *)
OGR_F_GetFieldAsString(Ogr_feature,
i));
db_double_quote_string(&strval);
sprintf(buf, ", '%s'", db_get_string(&strval));
}
}
else {
/* G_warning (_("Column value not set" )); */
if (Ogr_ftype == OFTInteger || Ogr_ftype == OFTReal) {
sprintf(buf, ", NULL");
#if GDAL_VERSION_NUM >= 1320
}
else if (Ogr_ftype == OFTString ||
Ogr_ftype == OFTIntegerList ||
Ogr_ftype == OFTDate) {
#else
}
else if (Ogr_ftype == OFTString ||
Ogr_ftype == OFTIntegerList) {
#endif
sprintf(buf, ", ''");
}
}
db_append_string(&sql, buf);
}
db_append_string(&sql, " )");
G_debug(3, db_get_string(&sql));
if (db_execute_immediate(driver, &sql) != DB_OK) {
db_close_database(driver);
db_shutdown_driver(driver);
G_fatal_error(_("Cannot insert new row: %s"),
db_get_string(&sql));
}
}
OGR_F_Destroy(Ogr_feature);
cat++;
}
G_percent(1, 1, 1); /* finish it */
if (!flag.notab->answer) {
db_commit_transaction(driver);
db_close_database_shutdown_driver(driver);
}
if (nogeom > 0)
G_warning(_("%d %s without geometry"), nogeom,
nogeom == 1 ? "feature" : "features");
}
separator = "-----------------------------------------------------";
G_message("%s", separator);
if (use_tmp_vect) {
/* TODO: is it necessary to build here? probably not, consumes time */
/* GV_BUILD_BASE is sufficient to toggle boundary cleaning */
Vect_build_partial(&Tmp, GV_BUILD_BASE);
}
if (use_tmp_vect && !flag.no_clean->answer &&
Vect_get_num_primitives(Out, GV_BOUNDARY) > 0) {
int ret, centr, ncentr, otype, n_overlaps, n_nocat;
CENTR *Centr;
struct spatial_index si;
double x, y, total_area, overlap_area, nocat_area;
struct bound_box box;
struct line_pnts *Points;
int nmodif;
Points = Vect_new_line_struct();
G_message("%s", separator);
G_warning(_("Cleaning polygons, result is not guaranteed!"));
if (snap >= 0) {
G_message("%s", separator);
G_message(_("Snapping boundaries (threshold = %.3e)..."), snap);
Vect_snap_lines(&Tmp, GV_BOUNDARY, snap, NULL);
}
/* It is not to clean to snap centroids, but I have seen data with 2 duplicate polygons
* (as far as decimal places were printed) and centroids were not identical */
/* Disabled, because overlapping polygons result in many duplicate centroids anyway */
/*
fprintf ( stderr, separator );
fprintf ( stderr, "Snap centroids (threshold 0.000001):\n" );
Vect_snap_lines ( &Map, GV_CENTROID, 0.000001, NULL, stderr );
*/
G_message("%s", separator);
G_message(_("Breaking polygons..."));
Vect_break_polygons(&Tmp, GV_BOUNDARY, NULL);
/* It is important to remove also duplicate centroids in case of duplicate input polygons */
G_message("%s", separator);
G_message(_("Removing duplicates..."));
Vect_remove_duplicates(&Tmp, GV_BOUNDARY | GV_CENTROID, NULL);
/* in non-pathological cases, the bulk of the cleaning is now done */
/* Vect_clean_small_angles_at_nodes() can change the geometry so that new intersections
* are created. We must call Vect_break_lines(), Vect_remove_duplicates()
* and Vect_clean_small_angles_at_nodes() until no more small angles are found */
do {
G_message("%s", separator);
G_message(_("Breaking boundaries..."));
Vect_break_lines(&Tmp, GV_BOUNDARY, NULL);
G_message("%s", separator);
G_message(_("Removing duplicates..."));
Vect_remove_duplicates(&Tmp, GV_BOUNDARY, NULL);
G_message("%s", separator);
G_message(_("Cleaning boundaries at nodes..."));
nmodif =
Vect_clean_small_angles_at_nodes(&Tmp, GV_BOUNDARY, NULL);
} while (nmodif > 0);
/* merge boundaries */
G_message("%s", separator);
G_message(_("Merging boundaries..."));
Vect_merge_lines(&Tmp, GV_BOUNDARY, NULL, NULL);
G_message("%s", separator);
if (type & GV_BOUNDARY) { /* that means lines were converted to boundaries */
G_message(_("Changing boundary dangles to lines..."));
Vect_chtype_dangles(&Tmp, -1.0, NULL);
}
else {
G_message(_("Removing dangles..."));
Vect_remove_dangles(&Tmp, GV_BOUNDARY, -1.0, NULL);
}
G_message("%s", separator);
if (type & GV_BOUNDARY) {
G_message(_("Changing boundary bridges to lines..."));
Vect_chtype_bridges(&Tmp, NULL);
}
else {
G_message(_("Removing bridges..."));
Vect_remove_bridges(&Tmp, NULL);
}
/* Boundaries are hopefully clean, build areas */
G_message("%s", separator);
Vect_build_partial(&Tmp, GV_BUILD_ATTACH_ISLES);
/* Calculate new centroids for all areas, centroids have the same id as area */
ncentr = Vect_get_num_areas(&Tmp);
G_debug(3, "%d centroids/areas", ncentr);
Centr = (CENTR *) G_calloc(ncentr + 1, sizeof(CENTR));
Vect_spatial_index_init(&si, 0);
for (centr = 1; centr <= ncentr; centr++) {
Centr[centr].valid = 0;
Centr[centr].cats = Vect_new_cats_struct();
ret = Vect_get_point_in_area(&Tmp, centr, &x, &y);
if (ret < 0) {
G_warning(_("Unable to calculate area centroid"));
continue;
}
Centr[centr].x = x;
Centr[centr].y = y;
Centr[centr].valid = 1;
box.N = box.S = y;
box.E = box.W = x;
box.T = box.B = 0;
Vect_spatial_index_add_item(&si, centr, &box);
}
/* Go through all layers and find centroids for each polygon */
for (layer = 0; layer < nlayers; layer++) {
G_message("%s", separator);
G_message(_("Finding centroids for OGR layer <%s>..."), layer_names[layer]);
layer_id = layers[layer];
Ogr_layer = OGR_DS_GetLayer(Ogr_ds, layer_id);
n_features = OGR_L_GetFeatureCount(Ogr_layer, 1);
OGR_L_ResetReading(Ogr_layer);
cat = 0; /* field = layer + 1 */
G_percent(cat, n_features, 2);
while ((Ogr_feature = OGR_L_GetNextFeature(Ogr_layer)) != NULL) {
cat++;
G_percent(cat, n_features, 2);
/* Geometry */
Ogr_geometry = OGR_F_GetGeometryRef(Ogr_feature);
if (Ogr_geometry != NULL) {
centroid(Ogr_geometry, Centr, &si, layer + 1, cat,
min_area, type);
}
OGR_F_Destroy(Ogr_feature);
}
}
/* Write centroids */
G_message("%s", separator);
G_message(_("Writing centroids..."));
n_overlaps = n_nocat = 0;
total_area = overlap_area = nocat_area = 0.0;
for (centr = 1; centr <= ncentr; centr++) {
double area;
G_percent(centr, ncentr, 2);
area = Vect_get_area_area(&Tmp, centr);
total_area += area;
if (!(Centr[centr].valid)) {
continue;
}
if (Centr[centr].cats->n_cats == 0) {
nocat_area += area;
n_nocat++;
continue;
}
if (Centr[centr].cats->n_cats > 1) {
Vect_cat_set(Centr[centr].cats, nlayers + 1,
Centr[centr].cats->n_cats);
overlap_area += area;
n_overlaps++;
}
Vect_reset_line(Points);
Vect_append_point(Points, Centr[centr].x, Centr[centr].y, 0.0);
if (type & GV_POINT)
otype = GV_POINT;
else
otype = GV_CENTROID;
Vect_write_line(&Tmp, otype, Points, Centr[centr].cats);
}
if (Centr)
G_free(Centr);
Vect_spatial_index_destroy(&si);
if (n_overlaps > 0) {
G_warning(_("%d areas represent more (overlapping) features, because polygons overlap "
"in input layer(s). Such areas are linked to more than 1 row in attribute table. "
"The number of features for those areas is stored as category in layer %d"),
n_overlaps, nlayers + 1);
}
G_message("%s", separator);
Vect_hist_write(&Map, separator);
Vect_hist_write(&Map, "\n");
sprintf(buf, _("%d input polygons\n"), n_polygons);
G_message(_("%d input polygons"), n_polygons);
Vect_hist_write(&Map, buf);
sprintf(buf, _("Total area: %G (%d areas)\n"), total_area, ncentr);
G_message(_("Total area: %G (%d areas)"), total_area, ncentr);
Vect_hist_write(&Map, buf);
sprintf(buf, _("Overlapping area: %G (%d areas)\n"), overlap_area,
n_overlaps);
G_message(_("Overlapping area: %G (%d areas)"), overlap_area,
n_overlaps);
Vect_hist_write(&Map, buf);
sprintf(buf, _("Area without category: %G (%d areas)\n"), nocat_area,
n_nocat);
G_message(_("Area without category: %G (%d areas)"), nocat_area,
n_nocat);
Vect_hist_write(&Map, buf);
G_message("%s", separator);
}
/* needed?
* OGR_DS_Destroy( Ogr_ds );
*/
if (use_tmp_vect) {
/* Copy temporary vector to output vector */
Vect_copy_map_lines(&Tmp, &Map);
/* release memory occupied by topo, we may need that memory for main output */
Vect_set_release_support(&Tmp);
Vect_close(&Tmp);
Vect_delete(tempvect);
}
Vect_build(&Map);
Vect_close(&Map);
/* -------------------------------------------------------------------- */
/* Extend current window based on dataset. */
/* -------------------------------------------------------------------- */
if (flag.extend->answer) {
G_get_default_window(&loc_wind);
loc_wind.north = MAX(loc_wind.north, cellhd.north);
loc_wind.south = MIN(loc_wind.south, cellhd.south);
loc_wind.west = MIN(loc_wind.west, cellhd.west);
loc_wind.east = MAX(loc_wind.east, cellhd.east);
loc_wind.rows = (int)ceil((loc_wind.north - loc_wind.south)
/ loc_wind.ns_res);
loc_wind.south = loc_wind.north - loc_wind.rows * loc_wind.ns_res;
loc_wind.cols = (int)ceil((loc_wind.east - loc_wind.west)
/ loc_wind.ew_res);
loc_wind.east = loc_wind.west + loc_wind.cols * loc_wind.ew_res;
G__put_window(&loc_wind, "../PERMANENT", "DEFAULT_WIND");
}
if (with_z && !flag.z->answer)
G_warning(_("Input data contains 3D features. Created vector is 2D only, "
"use -z flag to import 3D vector."));
exit(EXIT_SUCCESS);
}
/*--------------------------------------------------------------------*/
int main(int argc, char *argv[])
{
/* Variable declarations */
int nsply, nsplx, nrows, ncols, nsplx_adj, nsply_adj;
int nsubregion_col, nsubregion_row, subregion_row, subregion_col;
int subregion = 0, nsubregions = 0;
int last_row, last_column, grid, bilin, ext, flag_auxiliar, cross; /* booleans */
double stepN, stepE, lambda, mean;
double N_extension, E_extension, edgeE, edgeN;
const char *mapset, *drv, *db, *vector, *map;
char table_name[GNAME_MAX], title[64];
char xname[GNAME_MAX], xmapset[GMAPSET_MAX];
int dim_vect, nparameters, BW;
int *lineVect; /* Vector restoring primitive's ID */
double *TN, *Q, *parVect; /* Interpolating and least-square vectors */
double **N, **obsVect; /* Interpolation and least-square matrix */
SEGMENT out_seg, mask_seg;
const char *out_file, *mask_file;
int out_fd, mask_fd;
double seg_size;
int seg_mb, segments_in_memory;
int have_mask;
/* Structs declarations */
int raster;
struct Map_info In, In_ext, Out;
struct History history;
struct GModule *module;
struct Option *in_opt, *in_ext_opt, *out_opt, *out_map_opt, *stepE_opt,
*stepN_opt, *lambda_f_opt, *type_opt, *dfield_opt, *col_opt, *mask_opt,
*memory_opt, *solver, *error, *iter;
struct Flag *cross_corr_flag, *spline_step_flag;
struct Reg_dimens dims;
struct Cell_head elaboration_reg, original_reg;
struct bound_box general_box, overlap_box, original_box;
struct Point *observ;
struct line_cats *Cats;
dbCatValArray cvarr;
int with_z;
int nrec, ctype = 0;
struct field_info *Fi;
dbDriver *driver, *driver_cats;
/*----------------------------------------------------------------*/
/* Options declarations */
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("surface"));
G_add_keyword(_("interpolation"));
G_add_keyword(_("LIDAR"));
module->description =
_("Performs bicubic or bilinear spline interpolation with Tykhonov regularization.");
cross_corr_flag = G_define_flag();
cross_corr_flag->key = 'c';
cross_corr_flag->description =
_("Find the best Tykhonov regularizing parameter using a \"leave-one-out\" cross validation method");
spline_step_flag = G_define_flag();
spline_step_flag->key = 'e';
spline_step_flag->label = _("Estimate point density and distance");
spline_step_flag->description =
_("Estimate point density and distance for the input vector points within the current region extends and quit");
in_opt = G_define_standard_option(G_OPT_V_INPUT);
in_opt->label = _("Name of input vector point map");
dfield_opt = G_define_standard_option(G_OPT_V_FIELD);
dfield_opt->guisection = _("Settings");
col_opt = G_define_standard_option(G_OPT_DB_COLUMN);
col_opt->required = NO;
col_opt->label =
_("Name of the attribute column with values to be used for approximation");
col_opt->description = _("If not given and input is 3D vector map then z-coordinates are used.");
col_opt->guisection = _("Settings");
in_ext_opt = G_define_standard_option(G_OPT_V_INPUT);
in_ext_opt->key = "sparse_input";
in_ext_opt->required = NO;
in_ext_opt->label =
_("Name of input vector map with sparse points");
out_opt = G_define_standard_option(G_OPT_V_OUTPUT);
out_opt->required = NO;
out_opt->guisection = _("Outputs");
out_map_opt = G_define_standard_option(G_OPT_R_OUTPUT);
out_map_opt->key = "raster_output";
out_map_opt->required = NO;
out_map_opt->guisection = _("Outputs");
mask_opt = G_define_standard_option(G_OPT_R_INPUT);
mask_opt->key = "mask";
mask_opt->label = _("Raster map to use for masking (applies to raster output only)");
mask_opt->description = _("Only cells that are not NULL and not zero are interpolated");
mask_opt->required = NO;
stepE_opt = G_define_option();
stepE_opt->key = "ew_step";
stepE_opt->type = TYPE_DOUBLE;
stepE_opt->required = NO;
stepE_opt->answer = "4";
stepE_opt->description =
_("Length of each spline step in the east-west direction");
stepE_opt->guisection = _("Settings");
stepN_opt = G_define_option();
stepN_opt->key = "ns_step";
stepN_opt->type = TYPE_DOUBLE;
stepN_opt->required = NO;
stepN_opt->answer = "4";
stepN_opt->description =
_("Length of each spline step in the north-south direction");
stepN_opt->guisection = _("Settings");
type_opt = G_define_option();
type_opt->key = "method";
type_opt->description = _("Spline interpolation algorithm");
type_opt->type = TYPE_STRING;
type_opt->options = "bilinear,bicubic";
type_opt->answer = "bilinear";
type_opt->guisection = _("Settings");
G_asprintf((char **) &(type_opt->descriptions),
"bilinear;%s;bicubic;%s",
_("Bilinear interpolation"),
_("Bicubic interpolation"));
lambda_f_opt = G_define_option();
lambda_f_opt->key = "lambda_i";
lambda_f_opt->type = TYPE_DOUBLE;
lambda_f_opt->required = NO;
lambda_f_opt->description = _("Tykhonov regularization parameter (affects smoothing)");
lambda_f_opt->answer = "0.01";
lambda_f_opt->guisection = _("Settings");
solver = N_define_standard_option(N_OPT_SOLVER_SYMM);
solver->options = "cholesky,cg";
solver->answer = "cholesky";
iter = N_define_standard_option(N_OPT_MAX_ITERATIONS);
error = N_define_standard_option(N_OPT_ITERATION_ERROR);
memory_opt = G_define_option();
memory_opt->key = "memory";
memory_opt->type = TYPE_INTEGER;
memory_opt->required = NO;
memory_opt->answer = "300";
memory_opt->label = _("Maximum memory to be used (in MB)");
memory_opt->description = _("Cache size for raster rows");
/*----------------------------------------------------------------*/
/* Parsing */
G_gisinit(argv[0]);
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
vector = out_opt->answer;
map = out_map_opt->answer;
if (vector && map)
G_fatal_error(_("Choose either vector or raster output, not both"));
if (!vector && !map && !cross_corr_flag->answer)
G_fatal_error(_("No raster or vector or cross-validation output"));
if (!strcmp(type_opt->answer, "linear"))
bilin = P_BILINEAR;
else
bilin = P_BICUBIC;
stepN = atof(stepN_opt->answer);
stepE = atof(stepE_opt->answer);
lambda = atof(lambda_f_opt->answer);
flag_auxiliar = FALSE;
drv = db_get_default_driver_name();
if (!drv) {
if (db_set_default_connection() != DB_OK)
G_fatal_error(_("Unable to set default DB connection"));
drv = db_get_default_driver_name();
}
db = db_get_default_database_name();
if (!db)
G_fatal_error(_("No default DB defined"));
/* Set auxiliary table's name */
if (vector) {
if (G_name_is_fully_qualified(out_opt->answer, xname, xmapset)) {
sprintf(table_name, "%s_aux", xname);
}
else
sprintf(table_name, "%s_aux", out_opt->answer);
}
/* Something went wrong in a previous v.surf.bspline execution */
if (db_table_exists(drv, db, table_name)) {
/* Start driver and open db */
driver = db_start_driver_open_database(drv, db);
if (driver == NULL)
G_fatal_error(_("No database connection for driver <%s> is defined. Run db.connect."),
drv);
db_set_error_handler_driver(driver);
if (P_Drop_Aux_Table(driver, table_name) != DB_OK)
G_fatal_error(_("Old auxiliary table could not be dropped"));
db_close_database_shutdown_driver(driver);
}
/* Open input vector */
if ((mapset = G_find_vector2(in_opt->answer, "")) == NULL)
G_fatal_error(_("Vector map <%s> not found"), in_opt->answer);
Vect_set_open_level(1); /* WITHOUT TOPOLOGY */
if (1 > Vect_open_old(&In, in_opt->answer, mapset))
G_fatal_error(_("Unable to open vector map <%s> at the topological level"),
in_opt->answer);
bspline_field = 0; /* assume 3D input */
bspline_column = col_opt->answer;
with_z = !bspline_column && Vect_is_3d(&In);
if (Vect_is_3d(&In)) {
if (!with_z)
G_verbose_message(_("Input is 3D: using attribute values instead of z-coordinates for approximation"));
else
G_verbose_message(_("Input is 3D: using z-coordinates for approximation"));
}
else { /* 2D */
if (!bspline_column)
G_fatal_error(_("Input vector map is 2D. Parameter <%s> required."), col_opt->key);
}
if (!with_z) {
bspline_field = Vect_get_field_number(&In, dfield_opt->answer);
}
/* Estimate point density and mean distance for current region */
if (spline_step_flag->answer) {
double dens, dist;
if (P_estimate_splinestep(&In, &dens, &dist) == 0) {
fprintf(stdout, _("Estimated point density: %.4g"), dens);
fprintf(stdout, _("Estimated mean distance between points: %.4g"), dist);
}
else {
fprintf(stdout, _("No points in current region"));
}
Vect_close(&In);
exit(EXIT_SUCCESS);
}
/*----------------------------------------------------------------*/
/* Cross-correlation begins */
if (cross_corr_flag->answer) {
G_debug(1, "CrossCorrelation()");
cross = cross_correlation(&In, stepE, stepN);
if (cross != TRUE)
G_fatal_error(_("Cross validation didn't finish correctly"));
else {
G_debug(1, "Cross validation finished correctly");
Vect_close(&In);
G_done_msg(_("Cross validation finished for ew_step = %f and ns_step = %f"), stepE, stepN);
exit(EXIT_SUCCESS);
}
}
/* Open input ext vector */
ext = FALSE;
if (in_ext_opt->answer) {
ext = TRUE;
G_message(_("Vector map <%s> of sparse points will be interpolated"),
in_ext_opt->answer);
if ((mapset = G_find_vector2(in_ext_opt->answer, "")) == NULL)
G_fatal_error(_("Vector map <%s> not found"), in_ext_opt->answer);
Vect_set_open_level(1); /* WITHOUT TOPOLOGY */
if (1 > Vect_open_old(&In_ext, in_ext_opt->answer, mapset))
G_fatal_error(_("Unable to open vector map <%s> at the topological level"),
in_opt->answer);
}
/* Open output map */
/* vector output */
if (vector && !map) {
if (strcmp(drv, "dbf") == 0)
G_fatal_error(_("Sorry, the <%s> driver is not compatible with "
"the vector output of this module. "
"Try with raster output or another driver."), drv);
Vect_check_input_output_name(in_opt->answer, out_opt->answer,
G_FATAL_EXIT);
grid = FALSE;
if (0 > Vect_open_new(&Out, out_opt->answer, WITH_Z))
G_fatal_error(_("Unable to create vector map <%s>"),
out_opt->answer);
/* Copy vector Head File */
if (ext == FALSE) {
Vect_copy_head_data(&In, &Out);
Vect_hist_copy(&In, &Out);
}
else {
Vect_copy_head_data(&In_ext, &Out);
Vect_hist_copy(&In_ext, &Out);
}
Vect_hist_command(&Out);
G_verbose_message(_("Points in input vector map <%s> will be interpolated"),
vector);
}
/* read z values from attribute table */
if (bspline_field > 0) {
G_message(_("Reading values from attribute table..."));
db_CatValArray_init(&cvarr);
Fi = Vect_get_field(&In, bspline_field);
if (Fi == NULL)
G_fatal_error(_("Cannot read layer info"));
driver_cats = db_start_driver_open_database(Fi->driver, Fi->database);
/*G_debug (0, _("driver=%s db=%s"), Fi->driver, Fi->database); */
if (driver_cats == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
db_set_error_handler_driver(driver_cats);
nrec =
db_select_CatValArray(driver_cats, Fi->table, Fi->key,
col_opt->answer, NULL, &cvarr);
G_debug(3, "nrec = %d", nrec);
ctype = cvarr.ctype;
if (ctype != DB_C_TYPE_INT && ctype != DB_C_TYPE_DOUBLE)
G_fatal_error(_("Column type not supported"));
if (nrec < 0)
G_fatal_error(_("Unable to select data from table"));
G_verbose_message(_("%d records selected from table"), nrec);
db_close_database_shutdown_driver(driver_cats);
}
/*----------------------------------------------------------------*/
/* Interpolation begins */
G_debug(1, "Interpolation()");
/* Open driver and database */
driver = db_start_driver_open_database(drv, db);
if (driver == NULL)
G_fatal_error(_("No database connection for driver <%s> is defined. "
"Run db.connect."), drv);
db_set_error_handler_driver(driver);
/* Create auxiliary table */
if (vector) {
if ((flag_auxiliar = P_Create_Aux4_Table(driver, table_name)) == FALSE) {
P_Drop_Aux_Table(driver, table_name);
G_fatal_error(_("Interpolation: Creating table: "
"It was impossible to create table <%s>."),
table_name);
}
/* db_create_index2(driver, table_name, "ID"); */
/* sqlite likes that ??? */
db_close_database_shutdown_driver(driver);
driver = db_start_driver_open_database(drv, db);
}
/* raster output */
raster = -1;
Rast_set_fp_type(DCELL_TYPE);
if (!vector && map) {
grid = TRUE;
raster = Rast_open_fp_new(out_map_opt->answer);
G_verbose_message(_("Cells for raster map <%s> will be interpolated"),
map);
}
/* Setting regions and boxes */
G_debug(1, "Interpolation: Setting regions and boxes");
G_get_window(&original_reg);
G_get_window(&elaboration_reg);
Vect_region_box(&original_reg, &original_box);
Vect_region_box(&elaboration_reg, &overlap_box);
Vect_region_box(&elaboration_reg, &general_box);
nrows = Rast_window_rows();
ncols = Rast_window_cols();
/* Alloc raster matrix */
have_mask = 0;
out_file = mask_file = NULL;
out_fd = mask_fd = -1;
if (grid == TRUE) {
int row;
DCELL *drastbuf;
seg_mb = atoi(memory_opt->answer);
if (seg_mb < 3)
G_fatal_error(_("Memory in MB must be >= 3"));
if (mask_opt->answer)
seg_size = sizeof(double) + sizeof(char);
else
seg_size = sizeof(double);
seg_size = (seg_size * SEGSIZE * SEGSIZE) / (1 << 20);
segments_in_memory = seg_mb / seg_size + 0.5;
G_debug(1, "%d %dx%d segments held in memory", segments_in_memory, SEGSIZE, SEGSIZE);
out_file = G_tempfile();
out_fd = creat(out_file, 0666);
if (Segment_format(out_fd, nrows, ncols, SEGSIZE, SEGSIZE, sizeof(double)) != 1)
G_fatal_error(_("Can not create temporary file"));
close(out_fd);
out_fd = open(out_file, 2);
if (Segment_init(&out_seg, out_fd, segments_in_memory) != 1)
G_fatal_error(_("Can not initialize temporary file"));
/* initialize output */
G_message(_("Initializing output..."));
drastbuf = Rast_allocate_buf(DCELL_TYPE);
Rast_set_d_null_value(drastbuf, ncols);
for (row = 0; row < nrows; row++) {
G_percent(row, nrows, 2);
Segment_put_row(&out_seg, drastbuf, row);
}
G_percent(row, nrows, 2);
if (mask_opt->answer) {
int row, col, maskfd;
DCELL dval, *drastbuf;
char mask_val;
G_message(_("Load masking map"));
mask_file = G_tempfile();
mask_fd = creat(mask_file, 0666);
if (Segment_format(mask_fd, nrows, ncols, SEGSIZE, SEGSIZE, sizeof(char)) != 1)
G_fatal_error(_("Can not create temporary file"));
close(mask_fd);
mask_fd = open(mask_file, 2);
if (Segment_init(&mask_seg, mask_fd, segments_in_memory) != 1)
G_fatal_error(_("Can not initialize temporary file"));
maskfd = Rast_open_old(mask_opt->answer, "");
drastbuf = Rast_allocate_buf(DCELL_TYPE);
for (row = 0; row < nrows; row++) {
G_percent(row, nrows, 2);
Rast_get_d_row(maskfd, drastbuf, row);
for (col = 0; col < ncols; col++) {
dval = drastbuf[col];
if (Rast_is_d_null_value(&dval) || dval == 0)
mask_val = 0;
else
mask_val = 1;
Segment_put(&mask_seg, &mask_val, row, col);
}
}
G_percent(row, nrows, 2);
G_free(drastbuf);
Rast_close(maskfd);
have_mask = 1;
}
}
/*------------------------------------------------------------------
| Subdividing and working with tiles:
| Each original region will be divided into several subregions.
| Each one will be overlaped by its neighbouring subregions.
| The overlapping is calculated as a fixed OVERLAP_SIZE times
| the largest spline step plus 2 * edge
----------------------------------------------------------------*/
/* Fixing parameters of the elaboration region */
P_zero_dim(&dims); /* Set dim struct to zero */
nsplx_adj = NSPLX_MAX;
nsply_adj = NSPLY_MAX;
if (stepN > stepE)
dims.overlap = OVERLAP_SIZE * stepN;
else
dims.overlap = OVERLAP_SIZE * stepE;
P_get_edge(bilin, &dims, stepE, stepN);
P_set_dim(&dims, stepE, stepN, &nsplx_adj, &nsply_adj);
G_verbose_message(_("Adjusted EW splines %d"), nsplx_adj);
G_verbose_message(_("Adjusted NS splines %d"), nsply_adj);
/* calculate number of subregions */
edgeE = dims.ew_size - dims.overlap - 2 * dims.edge_v;
edgeN = dims.sn_size - dims.overlap - 2 * dims.edge_h;
N_extension = original_reg.north - original_reg.south;
E_extension = original_reg.east - original_reg.west;
nsubregion_col = ceil(E_extension / edgeE) + 0.5;
nsubregion_row = ceil(N_extension / edgeN) + 0.5;
if (nsubregion_col < 0)
nsubregion_col = 0;
if (nsubregion_row < 0)
nsubregion_row = 0;
nsubregions = nsubregion_row * nsubregion_col;
/* Creating line and categories structs */
Cats = Vect_new_cats_struct();
Vect_cat_set(Cats, 1, 0);
subregion_row = 0;
elaboration_reg.south = original_reg.north;
last_row = FALSE;
while (last_row == FALSE) { /* For each subregion row */
subregion_row++;
P_set_regions(&elaboration_reg, &general_box, &overlap_box, dims,
GENERAL_ROW);
if (elaboration_reg.north > original_reg.north) { /* First row */
P_set_regions(&elaboration_reg, &general_box, &overlap_box, dims,
FIRST_ROW);
}
if (elaboration_reg.south <= original_reg.south) { /* Last row */
P_set_regions(&elaboration_reg, &general_box, &overlap_box, dims,
LAST_ROW);
last_row = TRUE;
}
nsply =
ceil((elaboration_reg.north -
elaboration_reg.south) / stepN) + 0.5;
G_debug(1, "Interpolation: nsply = %d", nsply);
/*
if (nsply > NSPLY_MAX)
nsply = NSPLY_MAX;
*/
elaboration_reg.east = original_reg.west;
last_column = FALSE;
subregion_col = 0;
/* TODO: process each subregion using its own thread (via OpenMP or pthreads) */
/* I'm not sure about pthreads, but you can tell OpenMP to start all at the
same time and it will keep num_workers supplied with the next job as free
cpus become available */
while (last_column == FALSE) { /* For each subregion column */
int npoints = 0;
/* needed for sparse points interpolation */
int npoints_ext, *lineVect_ext = NULL;
double **obsVect_ext; /*, mean_ext = .0; */
struct Point *observ_ext;
subregion_col++;
subregion++;
if (nsubregions > 1)
G_message(_("Processing subregion %d of %d..."), subregion, nsubregions);
P_set_regions(&elaboration_reg, &general_box, &overlap_box, dims,
GENERAL_COLUMN);
if (elaboration_reg.west < original_reg.west) { /* First column */
P_set_regions(&elaboration_reg, &general_box, &overlap_box,
dims, FIRST_COLUMN);
}
if (elaboration_reg.east >= original_reg.east) { /* Last column */
P_set_regions(&elaboration_reg, &general_box, &overlap_box,
dims, LAST_COLUMN);
last_column = TRUE;
}
nsplx =
ceil((elaboration_reg.east -
elaboration_reg.west) / stepE) + 0.5;
G_debug(1, "Interpolation: nsplx = %d", nsplx);
/*
if (nsplx > NSPLX_MAX)
nsplx = NSPLX_MAX;
*/
G_debug(1, "Interpolation: (%d,%d): subregion bounds",
subregion_row, subregion_col);
G_debug(1, "Interpolation: \t\tNORTH:%.2f\t",
elaboration_reg.north);
G_debug(1, "Interpolation: WEST:%.2f\t\tEAST:%.2f",
elaboration_reg.west, elaboration_reg.east);
G_debug(1, "Interpolation: \t\tSOUTH:%.2f",
elaboration_reg.south);
#ifdef DEBUG_SUBREGIONS
fprintf(stdout, "B 5\n");
fprintf(stdout, " %.11g %.11g\n", elaboration_reg.east, elaboration_reg.north);
fprintf(stdout, " %.11g %.11g\n", elaboration_reg.west, elaboration_reg.north);
fprintf(stdout, " %.11g %.11g\n", elaboration_reg.west, elaboration_reg.south);
fprintf(stdout, " %.11g %.11g\n", elaboration_reg.east, elaboration_reg.south);
fprintf(stdout, " %.11g %.11g\n", elaboration_reg.east, elaboration_reg.north);
fprintf(stdout, "C 1 1\n");
fprintf(stdout, " %.11g %.11g\n", (elaboration_reg.west + elaboration_reg.east) / 2,
(elaboration_reg.south + elaboration_reg.north) / 2);
fprintf(stdout, " 1 %d\n", subregion);
#endif
/* reading points in interpolation region */
dim_vect = nsplx * nsply;
observ_ext = NULL;
if (grid == FALSE && ext == TRUE) {
observ_ext =
P_Read_Vector_Region_Map(&In_ext,
&elaboration_reg,
&npoints_ext, dim_vect,
1);
}
else
npoints_ext = 1;
if (grid == TRUE && have_mask) {
/* any unmasked cells in general region ? */
mean = 0;
observ_ext =
P_Read_Raster_Region_masked(&mask_seg, &original_reg,
original_box, general_box,
&npoints_ext, dim_vect, mean);
}
observ = NULL;
if (npoints_ext > 0) {
observ =
P_Read_Vector_Region_Map(&In, &elaboration_reg, &npoints,
dim_vect, bspline_field);
}
else
npoints = 1;
G_debug(1,
"Interpolation: (%d,%d): Number of points in <elaboration_box> is %d",
subregion_row, subregion_col, npoints);
if (npoints > 0)
G_verbose_message(_("%d points found in this subregion"), npoints);
/* only interpolate if there are any points in current subregion */
if (npoints > 0 && npoints_ext > 0) {
int i;
nparameters = nsplx * nsply;
BW = P_get_BandWidth(bilin, nsply);
/* Least Squares system */
N = G_alloc_matrix(nparameters, BW); /* Normal matrix */
TN = G_alloc_vector(nparameters); /* vector */
parVect = G_alloc_vector(nparameters); /* Parameters vector */
obsVect = G_alloc_matrix(npoints, 3); /* Observation vector */
Q = G_alloc_vector(npoints); /* "a priori" var-cov matrix */
lineVect = G_alloc_ivector(npoints); /* */
for (i = 0; i < npoints; i++) { /* Setting obsVect vector & Q matrix */
double dval;
Q[i] = 1; /* Q=I */
lineVect[i] = observ[i].lineID;
obsVect[i][0] = observ[i].coordX;
obsVect[i][1] = observ[i].coordY;
/* read z coordinates from attribute table */
if (bspline_field > 0) {
int cat, ival, ret;
cat = observ[i].cat;
if (cat < 0)
continue;
if (ctype == DB_C_TYPE_INT) {
ret =
db_CatValArray_get_value_int(&cvarr, cat,
&ival);
obsVect[i][2] = ival;
observ[i].coordZ = ival;
}
else { /* DB_C_TYPE_DOUBLE */
ret =
db_CatValArray_get_value_double(&cvarr, cat,
&dval);
obsVect[i][2] = dval;
observ[i].coordZ = dval;
}
if (ret != DB_OK) {
G_warning(_("Interpolation: (%d,%d): No record for point (cat = %d)"),
subregion_row, subregion_col, cat);
continue;
}
}
/* use z coordinates of 3D vector */
else {
obsVect[i][2] = observ[i].coordZ;
}
}
/* Mean calculation for every point */
mean = P_Mean_Calc(&elaboration_reg, observ, npoints);
G_debug(1, "Interpolation: (%d,%d): mean=%lf",
subregion_row, subregion_col, mean);
G_free(observ);
for (i = 0; i < npoints; i++)
obsVect[i][2] -= mean;
/* Bilinear interpolation */
if (bilin) {
G_debug(1,
"Interpolation: (%d,%d): Bilinear interpolation...",
subregion_row, subregion_col);
normalDefBilin(N, TN, Q, obsVect, stepE, stepN, nsplx,
nsply, elaboration_reg.west,
elaboration_reg.south, npoints,
nparameters, BW);
nCorrectGrad(N, lambda, nsplx, nsply, stepE, stepN);
}
/* Bicubic interpolation */
else {
G_debug(1,
"Interpolation: (%d,%d): Bicubic interpolation...",
subregion_row, subregion_col);
normalDefBicubic(N, TN, Q, obsVect, stepE, stepN, nsplx,
nsply, elaboration_reg.west,
elaboration_reg.south, npoints,
nparameters, BW);
nCorrectGrad(N, lambda, nsplx, nsply, stepE, stepN);
}
if(G_strncasecmp(solver->answer, "cg", 2) == 0)
G_math_solver_cg_sband(N, parVect, TN, nparameters, BW, atoi(iter->answer), atof(error->answer));
else
G_math_solver_cholesky_sband(N, parVect, TN, nparameters, BW);
G_free_matrix(N);
G_free_vector(TN);
G_free_vector(Q);
if (grid == TRUE) { /* GRID INTERPOLATION ==> INTERPOLATION INTO A RASTER */
G_debug(1, "Interpolation: (%d,%d): Regular_Points...",
subregion_row, subregion_col);
if (!have_mask) {
P_Regular_Points(&elaboration_reg, &original_reg, general_box,
overlap_box, &out_seg, parVect,
stepN, stepE, dims.overlap, mean,
nsplx, nsply, nrows, ncols, bilin);
}
else {
P_Sparse_Raster_Points(&out_seg,
&elaboration_reg, &original_reg,
general_box, overlap_box,
observ_ext, parVect,
stepE, stepN,
dims.overlap, nsplx, nsply,
npoints_ext, bilin, mean);
}
}
else { /* OBSERVATION POINTS INTERPOLATION */
if (ext == FALSE) {
G_debug(1, "Interpolation: (%d,%d): Sparse_Points...",
subregion_row, subregion_col);
P_Sparse_Points(&Out, &elaboration_reg, general_box,
overlap_box, obsVect, parVect,
lineVect, stepE, stepN,
dims.overlap, nsplx, nsply, npoints,
bilin, Cats, driver, mean,
table_name);
}
else { /* FLAG_EXT == TRUE */
/* done that earlier */
/*
int npoints_ext, *lineVect_ext = NULL;
double **obsVect_ext;
struct Point *observ_ext;
observ_ext =
P_Read_Vector_Region_Map(&In_ext,
&elaboration_reg,
&npoints_ext, dim_vect,
1);
*/
obsVect_ext = G_alloc_matrix(npoints_ext, 3); /* Observation vector_ext */
lineVect_ext = G_alloc_ivector(npoints_ext);
for (i = 0; i < npoints_ext; i++) { /* Setting obsVect_ext vector & Q matrix */
obsVect_ext[i][0] = observ_ext[i].coordX;
obsVect_ext[i][1] = observ_ext[i].coordY;
obsVect_ext[i][2] = observ_ext[i].coordZ - mean;
lineVect_ext[i] = observ_ext[i].lineID;
}
G_free(observ_ext);
G_debug(1, "Interpolation: (%d,%d): Sparse_Points...",
subregion_row, subregion_col);
P_Sparse_Points(&Out, &elaboration_reg, general_box,
overlap_box, obsVect_ext, parVect,
lineVect_ext, stepE, stepN,
dims.overlap, nsplx, nsply,
npoints_ext, bilin, Cats, driver,
mean, table_name);
G_free_matrix(obsVect_ext);
G_free_ivector(lineVect_ext);
} /* END FLAG_EXT == TRUE */
} /* END GRID == FALSE */
G_free_vector(parVect);
G_free_matrix(obsVect);
G_free_ivector(lineVect);
}
else {
if (observ)
G_free(observ);
if (observ_ext)
G_free(observ_ext);
if (npoints == 0)
G_warning(_("No data within this subregion. "
"Consider increasing spline step values."));
}
} /*! END WHILE; last_column = TRUE */
} /*! END WHILE; last_row = TRUE */
G_verbose_message(_("Writing output..."));
/* Writing the output raster map */
if (grid == TRUE) {
int row, col;
DCELL *drastbuf, dval;
if (have_mask) {
Segment_release(&mask_seg); /* release memory */
close(mask_fd);
unlink(mask_file);
}
drastbuf = Rast_allocate_buf(DCELL_TYPE);
for (row = 0; row < nrows; row++) {
G_percent(row, nrows, 2);
for (col = 0; col < ncols; col++) {
Segment_get(&out_seg, &dval, row, col);
drastbuf[col] = dval;
}
Rast_put_d_row(raster, drastbuf);
}
Rast_close(raster);
Segment_release(&out_seg); /* release memory */
close(out_fd);
unlink(out_file);
/* set map title */
sprintf(title, "%s interpolation with Tykhonov regularization",
type_opt->answer);
Rast_put_cell_title(out_map_opt->answer, title);
/* write map history */
Rast_short_history(out_map_opt->answer, "raster", &history);
Rast_command_history(&history);
Rast_write_history(out_map_opt->answer, &history);
}
/* Writing to the output vector map the points from the overlapping zones */
else if (flag_auxiliar == TRUE) {
if (ext == FALSE)
P_Aux_to_Vector(&In, &Out, driver, table_name);
else
P_Aux_to_Vector(&In_ext, &Out, driver, table_name);
/* Drop auxiliary table */
G_debug(1, "%s: Dropping <%s>", argv[0], table_name);
if (P_Drop_Aux_Table(driver, table_name) != DB_OK)
G_fatal_error(_("Auxiliary table could not be dropped"));
}
db_close_database_shutdown_driver(driver);
Vect_close(&In);
if (ext != FALSE)
Vect_close(&In_ext);
if (vector)
Vect_close(&Out);
G_done_msg(" ");
exit(EXIT_SUCCESS);
} /*END MAIN */
int main(int argc, char *argv[])
{
char *p;
int i, j, k;
int method, half, use_catno;
const char *mapset;
struct GModule *module;
struct Option *point_opt, /* point vector */
*area_opt, /* area vector */
*point_type_opt, /* point type */
*point_field_opt, /* point layer */
*area_field_opt, /* area layer */
*method_opt, /* stats method */
*point_column_opt, /* point column for stats */
*count_column_opt, /* area column for point count */
*stats_column_opt, /* area column for stats result */
*fs_opt; /* field separator for printed output */
struct Flag *print_flag;
char *fs;
struct Map_info PIn, AIn;
int point_type, point_field, area_field;
struct line_pnts *Points;
struct line_cats *ACats, *PCats;
AREA_CAT *Area_cat;
int pline, ptype, count;
int area, nareas, nacats, nacatsalloc;
int ctype, nrec;
struct field_info *PFi, *AFi;
dbString stmt;
dbDriver *Pdriver, *Adriver;
char buf[2000];
int update_ok, update_err;
struct boxlist *List;
struct bound_box box;
dbCatValArray cvarr;
dbColumn *column;
struct pvalcat
{
double dval;
int catno;
} *pvalcats;
int npvalcats, npvalcatsalloc;
stat_func *statsvalue = NULL;
double result;
column = NULL;
G_gisinit(argv[0]);
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("attribute table"));
G_add_keyword(_("database"));
G_add_keyword(_("univariate statistics"));
G_add_keyword(_("zonal statistics"));
module->description = _("Count points in areas, calculate statistics from point attributes.");
point_opt = G_define_standard_option(G_OPT_V_INPUT);
point_opt->key = "points";
point_opt->description = _("Name of existing vector map with points");
/* point_opt->guisection = _("Required"); */
area_opt = G_define_standard_option(G_OPT_V_INPUT);
area_opt->key = "areas";
area_opt->description = _("Name of existing vector map with areas");
/* area_opt->guisection = _("Required"); */
point_type_opt = G_define_standard_option(G_OPT_V_TYPE);
point_type_opt->key = "type";
point_type_opt->options = "point,centroid";
point_type_opt->answer = "point";
point_type_opt->label = _("Feature type");
point_type_opt->required = NO;
point_field_opt = G_define_standard_option(G_OPT_V_FIELD);
point_field_opt->key = "player";
point_field_opt->label = _("Layer number for points map");
area_field_opt = G_define_standard_option(G_OPT_V_FIELD);
area_field_opt->key = "alayer";
area_field_opt->label = _("Layer number for area map");
method_opt = G_define_option();
method_opt->key = "method";
method_opt->type = TYPE_STRING;
method_opt->required = NO;
method_opt->multiple = NO;
p = G_malloc(1024);
for (i = 0; menu[i].name; i++) {
if (i)
strcat(p, ",");
else
*p = 0;
strcat(p, menu[i].name);
}
method_opt->options = p;
method_opt->description = _("Method for aggregate statistics");
point_column_opt = G_define_standard_option(G_OPT_DB_COLUMN);
point_column_opt->key = "pcolumn";
point_column_opt->required = NO;
point_column_opt->multiple = NO;
point_column_opt->label =
_("Column name of points map to use for statistics");
point_column_opt->description = _("Column of points map must be numeric");
count_column_opt = G_define_option();
count_column_opt->key = "ccolumn";
count_column_opt->type = TYPE_STRING;
count_column_opt->required = NO;
count_column_opt->multiple = NO;
count_column_opt->label = _("Column name to upload points count");
count_column_opt->description =
_("Column to hold points count, must be of type integer, will be created if not existing");
stats_column_opt = G_define_option();
stats_column_opt->key = "scolumn";
stats_column_opt->type = TYPE_STRING;
stats_column_opt->required = NO;
stats_column_opt->multiple = NO;
stats_column_opt->label = _("Column name to upload statistics");
stats_column_opt->description =
_("Column to hold statistics, must be of type double, will be created if not existing");
fs_opt = G_define_standard_option(G_OPT_F_SEP);
print_flag = G_define_flag();
print_flag->key = 'p';
print_flag->label =
_("Print output to stdout, do not update attribute table");
print_flag->description = _("First column is always area category");
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
point_type = Vect_option_to_types(point_type_opt);
point_field = atoi(point_field_opt->answer);
area_field = atoi(area_field_opt->answer);
if (print_flag->answer)
/* get field separator */
fs = G_option_to_separator(fs_opt);
else
fs = NULL;
/* check for stats */
if (method_opt->answer) {
if (!point_column_opt->answer) {
G_fatal_error("Method but no point column selected");
}
if (!print_flag->answer && !stats_column_opt->answer)
G_fatal_error("Name for stats column is missing");
}
if (point_column_opt->answer) {
if (!method_opt->answer)
G_fatal_error("No method for statistics selected");
if (!print_flag->answer && !stats_column_opt->answer)
G_fatal_error("Name for stats column is missing");
}
/* Open points vector */
if ((mapset = G_find_vector2(point_opt->answer, "")) == NULL)
G_fatal_error(_("Vector map <%s> not found"), point_opt->answer);
Vect_set_open_level(2);
if (Vect_open_old(&PIn, point_opt->answer, mapset) < 0)
G_fatal_error(_("Unable to open vector map <%s>"), point_opt->answer);
/* Open areas vector */
if ((mapset = G_find_vector2(area_opt->answer, "")) == NULL)
G_fatal_error(_("Vector map <%s> not found"), area_opt->answer);
if (!print_flag->answer && strcmp(mapset, G_mapset()) != 0)
G_fatal_error(_("Vector map <%s> is not in user mapset and cannot be updated"),
area_opt->answer);
Vect_set_open_level(2);
if (Vect_open_old(&AIn, area_opt->answer, mapset) < 0)
G_fatal_error(_("Unable to open vector map <%s>"), area_opt->answer);
method = -1;
use_catno = 0;
half = 0;
if (method_opt->answer) {
/* get the method */
for (method = 0; (p = menu[method].name); method++)
if ((strcmp(p, method_opt->answer) == 0))
break;
if (!p) {
G_warning(_("<%s=%s> unknown %s"),
method_opt->key, method_opt->answer,
method_opt->answer);
G_usage();
exit(EXIT_FAILURE);
}
/* establish the statsvalue routine */
statsvalue = menu[method].method;
/* category number of lowest/highest value */
if ((strcmp(menu[method].name, menu[5].name) == 0) ||
(strcmp(menu[method].name, menu[7].name) == 0))
use_catno = 1;
G_debug(1, "method: %s, use cat value: %s", menu[method].name,
(use_catno == 1 ? "yes" : "no"));
}
/* Open database driver */
db_init_string(&stmt);
Adriver = NULL;
if (!print_flag->answer) {
AFi = Vect_get_field(&AIn, area_field);
if (AFi == NULL)
G_fatal_error(_("Database connection not defined for layer %d"),
area_field);
Adriver = db_start_driver_open_database(AFi->driver, AFi->database);
if (Adriver == NULL)
G_fatal_error(_("Unable to open database <%s> with driver <%s>"),
AFi->database, AFi->driver);
if (!count_column_opt->answer)
G_fatal_error(_("ccolumn is required to upload point counts"));
/* check if count column exists */
G_debug(1, "check if count column exists");
db_get_column(Adriver, AFi->table, count_column_opt->answer, &column);
if (column) {
/* check count column type */
if (db_column_Ctype(Adriver, AFi->table, count_column_opt->answer)
!= DB_C_TYPE_INT)
G_fatal_error(_("ccolumn must be of type integer"));
db_free_column(column);
column = NULL;
}
else {
/* create count column */
/* db_add_column() exists but is not implemented,
* see lib/db/stubs/add_col.c */
sprintf(buf, "alter table %s add column %s integer",
AFi->table, count_column_opt->answer);
db_set_string(&stmt, buf);
if (db_execute_immediate(Adriver, &stmt) != DB_OK)
G_fatal_error(_("Unable to add column <%s>"),
count_column_opt->answer);
}
if (method_opt->answer) {
if (!stats_column_opt->answer)
G_fatal_error(_("scolumn is required to upload point stats"));
/* check if stats column exists */
G_debug(1, "check if stats column exists");
db_get_column(Adriver, AFi->table, stats_column_opt->answer,
&column);
if (column) {
/* check stats column type */
if (db_column_Ctype
(Adriver, AFi->table,
stats_column_opt->answer) != DB_C_TYPE_DOUBLE)
G_fatal_error(_("scolumn must be of type double"));
db_free_column(column);
column = NULL;
}
else {
/* create stats column */
/* db_add_column() exists but is not implemented,
* see lib/db/stubs/add_col.c */
sprintf(buf, "alter table %s add column %s double",
AFi->table, stats_column_opt->answer);
db_set_string(&stmt, buf);
if (db_execute_immediate(Adriver, &stmt) != DB_OK)
G_fatal_error(_("Unable to add column <%s>"),
stats_column_opt->answer);
}
}
}
else
AFi = NULL;
Pdriver = NULL;
if (method_opt->answer) {
G_verbose_message(_("collecting attributes from points vector..."));
PFi = Vect_get_field(&PIn, point_field);
if (PFi == NULL)
G_fatal_error(_("Database connection not defined for layer %d"),
point_field);
Pdriver = db_start_driver_open_database(PFi->driver, PFi->database);
if (Pdriver == NULL)
G_fatal_error(_("Unable to open database <%s> with driver <%s>"),
PFi->database, PFi->driver);
/* check if point column exists */
db_get_column(Pdriver, PFi->table, point_column_opt->answer, &column);
if (column) {
db_free_column(column);
column = NULL;
}
else {
G_fatal_error(_("Column <%s> not found in table <%s>"),
point_column_opt->answer, PFi->table);
}
/* Check column type */
ctype =
db_column_Ctype(Pdriver, PFi->table, point_column_opt->answer);
if (ctype == DB_C_TYPE_INT)
half = menu[method].half;
else if (ctype == DB_C_TYPE_DOUBLE)
half = 0;
else
G_fatal_error(_("column for points vector must be numeric"));
db_CatValArray_init(&cvarr);
nrec = db_select_CatValArray(Pdriver, PFi->table, PFi->key,
point_column_opt->answer, NULL, &cvarr);
G_debug(1, "selected values = %d", nrec);
db_close_database_shutdown_driver(Pdriver);
}
Points = Vect_new_line_struct();
ACats = Vect_new_cats_struct();
PCats = Vect_new_cats_struct();
List = Vect_new_boxlist(0);
/* Allocate space ( may be more than needed (duplicate cats and elements without cats) ) */
if ((nareas = Vect_get_num_areas(&AIn)) <= 0)
G_fatal_error("No areas in area input vector");
nacatsalloc = nareas;
Area_cat = (AREA_CAT *) G_calloc(nacatsalloc, sizeof(AREA_CAT));
/* Read all cats from 'area' */
nacats = 0;
for (area = 1; area <= nareas; area++) {
Vect_get_area_cats(&AIn, area, ACats);
if (ACats->n_cats <= 0)
continue;
for (i = 0; i < ACats->n_cats; i++) {
if (ACats->field[i] == area_field) {
Area_cat[nacats].area_cat = ACats->cat[i];
Area_cat[nacats].count = 0;
Area_cat[nacats].nvalues = 0;
Area_cat[nacats].nalloc = 0;
nacats++;
if (nacats >= nacatsalloc) {
nacatsalloc += 100;
Area_cat =
(AREA_CAT *) G_realloc(Area_cat,
nacatsalloc *
sizeof(AREA_CAT));
}
}
}
}
G_debug(1, "%d cats loaded from vector (including duplicates)", nacats);
/* Sort by category */
qsort((void *)Area_cat, nacats, sizeof(AREA_CAT), cmp_area);
/* remove duplicate categories */
for (i = 1; i < nacats; i++) {
if (Area_cat[i].area_cat == Area_cat[i - 1].area_cat) {
for (j = i; j < nacats - 1; j++) {
Area_cat[j].area_cat = Area_cat[j + 1].area_cat;
}
nacats--;
}
}
G_debug(1, "%d cats loaded from vector (unique)", nacats);
/* Go through all areas in area vector and find points in points vector
* falling into the area */
npvalcatsalloc = 10;
npvalcats = 0;
pvalcats =
(struct pvalcat *)G_calloc(npvalcatsalloc, sizeof(struct pvalcat));
G_message(_("Selecting points for each area..."));
count = 0;
for (area = 1; area <= nareas; area++) {
dbCatVal *catval;
G_debug(3, "area = %d", area);
G_percent(area, nareas, 2);
Vect_get_area_cats(&AIn, area, ACats);
if (ACats->n_cats <= 0)
continue;
/* select points by box */
Vect_get_area_box(&AIn, area, &box);
box.T = PORT_DOUBLE_MAX;
box.B = -PORT_DOUBLE_MAX;
Vect_select_lines_by_box(&PIn, &box, point_type, List);
G_debug(4, "%d points selected by box", List->n_values);
/* For each point in box check if it is in the area */
for (i = 0; i < List->n_values; i++) {
pline = List->id[i];
G_debug(4, "%d: point %d", i, pline);
ptype = Vect_read_line(&PIn, Points, PCats, pline);
if (!(ptype & point_type))
continue;
/* point in area */
if (Vect_point_in_area(Points->x[0], Points->y[0], &AIn, area, &box)) {
AREA_CAT *area_info, search_ai;
int tmp_cat;
/* stats on point column */
if (method_opt->answer) {
npvalcats = 0;
tmp_cat = -1;
for (j = 0; j < PCats->n_cats; j++) {
if (PCats->field[j] == point_field) {
if (tmp_cat >= 0)
G_debug(3,
"More cats found in point layer (point=%d)",
pline);
tmp_cat = PCats->cat[j];
/* find cat in array */
db_CatValArray_get_value(&cvarr, tmp_cat,
&catval);
if (catval) {
pvalcats[npvalcats].catno = tmp_cat;
switch (cvarr.ctype) {
case DB_C_TYPE_INT:
pvalcats[npvalcats].dval = catval->val.i;
npvalcats++;
break;
case DB_C_TYPE_DOUBLE:
pvalcats[npvalcats].dval = catval->val.d;
npvalcats++;
break;
}
if (npvalcats >= npvalcatsalloc) {
npvalcatsalloc += 10;
pvalcats =
(struct pvalcat *)G_realloc(pvalcats,
npvalcatsalloc
*
sizeof
(struct
pvalcat));
}
}
}
}
}
/* update count for all area cats of given field */
search_ai.area_cat = -1;
for (j = 0; j < ACats->n_cats; j++) {
if (ACats->field[j] == area_field) {
if (search_ai.area_cat >= 0)
G_debug(3,
"More cats found in area layer (area=%d)",
area);
search_ai.area_cat = ACats->cat[j];
/* find cat in array */
area_info =
(AREA_CAT *) bsearch((void *)&search_ai, Area_cat,
nacats, sizeof(AREA_CAT),
cmp_area);
if (area_info->area_cat != search_ai.area_cat)
G_fatal_error(_("could not find area category %d"),
search_ai.area_cat);
/* each point is counted once, also if it has
* more than one category or no category
* OK? */
area_info->count++;
if (method_opt->answer) {
/* ensure enough space */
if (area_info->nvalues + npvalcats >=
area_info->nalloc) {
if (area_info->nalloc == 0) {
area_info->nalloc = npvalcats + 10;
area_info->values =
(double *)G_calloc(area_info->nalloc,
sizeof(double));
area_info->cats =
(int *)G_calloc(area_info->nalloc,
sizeof(int));
}
else
area_info->nalloc +=
area_info->nvalues + npvalcats + 10;
area_info->values =
(double *)G_realloc(area_info->values,
area_info->nalloc *
sizeof(double));
area_info->cats =
(int *)G_realloc(area_info->cats,
area_info->nalloc *
sizeof(int));
}
for (k = 0; k < npvalcats; k++) {
area_info->cats[area_info->nvalues] =
pvalcats[k].catno;
area_info->values[area_info->nvalues] =
pvalcats[k].dval;
area_info->nvalues++;
}
}
}
}
count++;
}
} /* next point in box */
} /* next area */
G_debug(1, "count = %d", count);
/* release catval array */
if (method_opt->answer)
db_CatValArray_free(&cvarr);
Vect_close(&PIn);
/* Update table or print to stdout */
if (print_flag->answer) { /* print header */
fprintf(stdout, "area_cat%scount", fs);
if (method_opt->answer)
fprintf(stdout, "%s%s", fs, menu[method].name);
fprintf(stdout, "\n");
}
else {
G_message("Updating attributes for area vector...");
update_err = update_ok = 0;
}
if (Adriver)
db_begin_transaction(Adriver);
for (i = 0; i < nacats; i++) {
if (!print_flag->answer)
G_percent(i, nacats, 2);
result = 0;
if (Area_cat[i].count > 0 && method_opt->answer) {
/* get stats */
statsvalue(&result, Area_cat[i].values, Area_cat[i].nvalues,
NULL);
if (half)
result += 0.5;
else if (use_catno)
result = Area_cat[i].cats[(int)result];
}
if (print_flag->answer) {
fprintf(stdout, "%d%s%d", Area_cat[i].area_cat, fs,
Area_cat[i].count);
if (method_opt->answer) {
if (Area_cat[i].count > 0)
fprintf(stdout, "%s%.15g", fs, result);
else
fprintf(stdout, "%snull", fs);
}
fprintf(stdout, "\n");
}
else {
sprintf(buf, "update %s set %s = %d", AFi->table,
count_column_opt->answer, Area_cat[i].count);
db_set_string(&stmt, buf);
if (method_opt->answer) {
if (Area_cat[i].count > 0)
sprintf(buf, " , %s = %.15g", stats_column_opt->answer,
result);
else
sprintf(buf, " , %s = null", stats_column_opt->answer);
db_append_string(&stmt, buf);
}
sprintf(buf, " where %s = %d", AFi->key, Area_cat[i].area_cat);
db_append_string(&stmt, buf);
G_debug(2, "SQL: %s", db_get_string(&stmt));
if (db_execute_immediate(Adriver, &stmt) == DB_OK) {
update_ok++;
}
else {
update_err++;
}
}
}
if (Adriver)
db_commit_transaction(Adriver);
if (!print_flag->answer) {
G_percent(nacats, nacats, 2);
db_close_database_shutdown_driver(Adriver);
db_free_string(&stmt);
G_message(_("%d records updated"), update_ok);
if (update_err > 0)
G_message(_("%d update errors"), update_err);
Vect_set_db_updated(&AIn);
}
Vect_close(&AIn);
G_done_msg(" ");
exit(EXIT_SUCCESS);
}
int main(int argc, char **argv)
{
struct GModule *module;
struct Option *map_opt, *field_opt, *fs_opt, *vs_opt, *nv_opt, *col_opt,
*where_opt, *file_opt;
struct Flag *c_flag, *v_flag, *r_flag;
dbDriver *driver;
dbString sql, value_string;
dbCursor cursor;
dbTable *table;
dbColumn *column;
dbValue *value;
struct field_info *Fi;
int ncols, col, more;
struct Map_info Map;
char query[1024];
struct ilist *list_lines;
struct bound_box *min_box, *line_box;
int i, line, area, init_box, cat;
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("database"));
G_add_keyword(_("attribute table"));
module->description = _("Prints vector map attributes.");
map_opt = G_define_standard_option(G_OPT_V_MAP);
field_opt = G_define_standard_option(G_OPT_V_FIELD);
col_opt = G_define_standard_option(G_OPT_DB_COLUMNS);
where_opt = G_define_standard_option(G_OPT_DB_WHERE);
fs_opt = G_define_standard_option(G_OPT_F_SEP);
fs_opt->description = _("Output field separator");
fs_opt->guisection = _("Format");
vs_opt = G_define_standard_option(G_OPT_F_SEP);
vs_opt->key = "vs";
vs_opt->description = _("Output vertical record separator");
vs_opt->answer = NULL;
vs_opt->guisection = _("Format");
nv_opt = G_define_option();
nv_opt->key = "nv";
nv_opt->type = TYPE_STRING;
nv_opt->required = NO;
nv_opt->description = _("Null value indicator");
nv_opt->guisection = _("Format");
file_opt = G_define_standard_option(G_OPT_F_OUTPUT);
file_opt->key = "file";
file_opt->required = NO;
file_opt->description =
_("Name for output file (if omitted or \"-\" output to stdout)");
r_flag = G_define_flag();
r_flag->key = 'r';
r_flag->description =
_("Print minimal region extent of selected vector features instead of attributes");
c_flag = G_define_flag();
c_flag->key = 'c';
c_flag->description = _("Do not include column names in output");
c_flag->guisection = _("Format");
v_flag = G_define_flag();
v_flag->key = 'v';
v_flag->description = _("Vertical output (instead of horizontal)");
v_flag->guisection = _("Format");
G_gisinit(argv[0]);
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
/* set input vector map name and mapset */
if (file_opt->answer && strcmp(file_opt->answer, "-") != 0) {
if (NULL == freopen(file_opt->answer, "w", stdout)) {
G_fatal_error(_("Unable to open file <%s> for writing"), file_opt->answer);
}
}
if (r_flag->answer) {
min_box = (struct bound_box *) G_malloc(sizeof(struct bound_box));
G_zero((void *)min_box, sizeof(struct bound_box));
line_box = (struct bound_box *) G_malloc(sizeof(struct bound_box));
list_lines = Vect_new_list();
}
else {
min_box = line_box = NULL;
list_lines = NULL;
}
db_init_string(&sql);
db_init_string(&value_string);
/* open input vector */
if (!r_flag->answer)
Vect_open_old_head2(&Map, map_opt->answer, "", field_opt->answer);
else {
if (2 > Vect_open_old2(&Map, map_opt->answer, "", field_opt->answer)) {
Vect_close(&Map);
G_fatal_error(_("Unable to open vector map <%s> at topology level. "
"Flag '%c' requires topology level."),
map_opt->answer, r_flag->key);
}
}
if ((Fi = Vect_get_field2(&Map, field_opt->answer)) == NULL)
G_fatal_error(_("Database connection not defined for layer <%s>"),
field_opt->answer);
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (!driver)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
if (col_opt->answer)
sprintf(query, "SELECT %s FROM ", col_opt->answer);
else
sprintf(query, "SELECT * FROM ");
db_set_string(&sql, query);
db_append_string(&sql, Fi->table);
if (where_opt->answer) {
char *buf = NULL;
buf = G_malloc((strlen(where_opt->answer) + 8));
sprintf(buf, " WHERE %s", where_opt->answer);
db_append_string(&sql, buf);
G_free(buf);
}
if (db_open_select_cursor(driver, &sql, &cursor, DB_SEQUENTIAL) != DB_OK)
G_fatal_error(_("Unable to open select cursor"));
table = db_get_cursor_table(&cursor);
ncols = db_get_table_number_of_columns(table);
/* column names if horizontal output (ignore for -r) */
if (!v_flag->answer && !c_flag->answer && !r_flag->answer) {
for (col = 0; col < ncols; col++) {
column = db_get_table_column(table, col);
if (col)
fprintf(stdout, "%s", fs_opt->answer);
fprintf(stdout, "%s", db_get_column_name(column));
}
fprintf(stdout, "\n");
}
init_box = 1;
/* fetch the data */
while (1) {
if (db_fetch(&cursor, DB_NEXT, &more) != DB_OK)
G_fatal_error(_("Unable to fetch data from table <%s>"),
Fi->table);
if (!more)
break;
cat = -1;
for (col = 0; col < ncols; col++) {
column = db_get_table_column(table, col);
value = db_get_column_value(column);
if (cat < 0 && strcmp(Fi->key, db_get_column_name(column)) == 0) {
cat = db_get_value_int(value);
if (r_flag->answer)
break;
}
if (r_flag->answer)
continue;
db_convert_column_value_to_string(column, &value_string);
if (!c_flag->answer && v_flag->answer)
fprintf(stdout, "%s%s", db_get_column_name(column),
fs_opt->answer);
if (col && !v_flag->answer)
fprintf(stdout, "%s", fs_opt->answer);
if (nv_opt->answer && db_test_value_isnull(value))
fprintf(stdout, "%s", nv_opt->answer);
else
fprintf(stdout, "%s", db_get_string(&value_string));
if (v_flag->answer)
fprintf(stdout, "\n");
}
if (r_flag->answer) {
/* get minimal region extent */
Vect_cidx_find_all(&Map, Vect_get_field_number(&Map, field_opt->answer), -1, cat, list_lines);
for (i = 0; i < list_lines->n_values; i++) {
line = list_lines->value[i];
area = Vect_get_centroid_area(&Map, line);
if (area > 0) {
if (!Vect_get_area_box(&Map, area, line_box))
G_fatal_error(_("Unable to get bounding box of area %d"),
area);
}
else {
if (!Vect_get_line_box(&Map, line, line_box))
G_fatal_error(_("Unable to get bounding box of line %d"),
line);
}
if (init_box) {
Vect_box_copy(min_box, line_box);
init_box = 0;
}
else {
Vect_box_extend(min_box, line_box);
}
}
}
else {
if (!v_flag->answer)
fprintf(stdout, "\n");
else if (vs_opt->answer)
fprintf(stdout, "%s\n", vs_opt->answer);
}
}
if (r_flag->answer) {
fprintf(stdout, "n=%f\n", min_box->N);
fprintf(stdout, "s=%f\n", min_box->S);
fprintf(stdout, "w=%f\n", min_box->W);
fprintf(stdout, "e=%f\n", min_box->E);
if (Vect_is_3d(&Map)) {
fprintf(stdout, "t=%f\n", min_box->T);
fprintf(stdout, "b=%f\n", min_box->B);
}
fflush(stdout);
G_free((void *)min_box);
G_free((void *)line_box);
Vect_destroy_list(list_lines);
}
db_close_cursor(&cursor);
db_close_database_shutdown_driver(driver);
Vect_close(&Map);
exit(EXIT_SUCCESS);
}
/* Returns 0 - ok , 1 - error */
int
plot(int ctype, struct Map_info *Map, int type, int field,
char *columns, int ncols, char *sizecol, int size, double scale,
COLOR * ocolor, COLOR * colors, int y_center, double *max_reference,
int do3d)
{
int ltype, nlines, line, col, more, coltype, nselcols;
double x, y, csize, len;
struct line_pnts *Points;
struct line_cats *Cats;
int cat;
double *val;
char buf[2000];
struct field_info *Fi;
dbDriver *driver;
dbValue *value;
dbString sql;
dbCursor cursor;
dbTable *table;
dbColumn *column;
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
db_init_string(&sql);
Fi = Vect_get_field(Map, field);
if (Fi == NULL)
G_fatal_error(_("Database connection not defined for layer %d"),
field);
/* Open driver */
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL) {
G_warning(_("Unable to open database <%s> by driver <%s>"),
Fi->database,
Fi->driver);
return 1;
}
db_set_error_handler_driver(driver);
val = (double *)G_malloc((ncols + 1) * sizeof(double)); /* + 1 for sizecol */
Vect_rewind(Map);
nlines = Vect_get_num_lines(Map);
/* loop through each vector feature */
for (line = 1; line <= nlines; line++) {
G_debug(3, "line = %d", line);
ltype = Vect_read_line(Map, Points, Cats, line);
if (!(ltype & type))
continue;
Vect_cat_get(Cats, field, &cat);
if (cat < 0)
continue;
/* Select values from DB */
if (ctype == CTYPE_PIE && sizecol != NULL) {
sprintf(buf, "select %s, %s from %s where %s = %d", columns,
sizecol, Fi->table, Fi->key, cat);
nselcols = ncols + 1;
}
else {
sprintf(buf, "select %s from %s where %s = %d", columns,
Fi->table, Fi->key, cat);
nselcols = ncols;
}
db_set_string(&sql, buf);
G_debug(3, "SQL: %s", buf);
if (db_open_select_cursor(driver, &sql, &cursor, DB_SEQUENTIAL) !=
DB_OK) {
G_warning(_("Unable to open select cursor: '%s'"),
buf);
return 1;
}
table = db_get_cursor_table(&cursor);
if (db_fetch(&cursor, DB_NEXT, &more) != DB_OK || !more)
continue;
for (col = 0; col < nselcols; col++) {
column = db_get_table_column(table, col);
value = db_get_column_value(column);
coltype = db_sqltype_to_Ctype(db_get_column_sqltype(column));
switch (coltype) {
case DB_C_TYPE_INT:
val[col] = (double)db_get_value_int(value);
break;
case DB_C_TYPE_DOUBLE:
val[col] = db_get_value_double(value);
break;
default:
G_warning("Column type not supported (must be INT or FLOAT)");
return 1;
}
G_debug(4, " val[%d]: %f", col, val[col]);
}
db_close_cursor(&cursor);
/* Center of chart */
if (ltype & GV_LINES) { /* find center */
len = Vect_line_length(Points) / 2;
Vect_point_on_line(Points, len, &x, &y, NULL, NULL, NULL);
}
else {
x = Points->x[0];
y = Points->y[0];
}
if (ctype == CTYPE_PIE) {
if (sizecol != NULL) {
csize = val[ncols];
size = scale * csize;
}
pie(x, y, size, val, ncols, ocolor, colors, do3d);
}
else {
bar(x, y, size, scale, val, ncols, ocolor, colors, y_center,
max_reference, do3d);
}
}
db_close_database_shutdown_driver(driver);
Vect_destroy_line_struct(Points);
Vect_destroy_cats_struct(Cats);
return 0;
}
void rgb2colr(const struct Map_info *Map, int layer, const char *rgb_column,
struct Colors *colors)
{
int i, ret, nskipped;
int red, grn, blu;
const char *rgb;
struct field_info *fi;
dbDriver *driver;
dbCatValArray cvarr;
dbCatVal *cv;
fi = Vect_get_field(Map, layer);
if (!fi)
G_fatal_error(_("Database connection not defined for layer %d"),
layer);
driver = db_start_driver_open_database(fi->driver, fi->database);
if (!driver)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
fi->database, fi->driver);
if (db_column_Ctype(driver, fi->table, rgb_column) != DB_C_TYPE_STRING)
G_fatal_error(_("Data type of RGB column <%s> must be char"),
rgb_column);
if (0 > db_select_CatValArray(driver, fi->table, fi->key,
rgb_column, NULL, &cvarr))
G_warning(_("No RGB values found"));
Rast_init_colors(colors);
cv = NULL;
nskipped = 0;
for (i = 0; i < cvarr.n_values; i++) {
cv = &(cvarr.value[i]);
rgb = db_get_string(cv->val.s);
G_debug(3, "cat = %d RGB = %s", cv->cat, rgb);
if (!rgb) {
nskipped++;
continue;
}
ret = G_str_to_color(rgb, &red, &grn, &blu);
if (ret != 1) {
G_debug(3, "Invalid RGB value '%s'", rgb);
nskipped++;
continue;
}
Rast_add_c_color_rule((const CELL*) &(cv->cat), red, grn, blu,
(const CELL*) &(cv->cat), red, grn, blu, colors);
}
if (nskipped > 0)
G_warning(_("%d invalid RGB color values skipped"), nskipped);
db_close_database_shutdown_driver(driver);
}
int main(int argc, char *argv[])
{
struct Map_info In, Out;
static struct line_pnts *Points;
struct line_cats *Cats;
struct GModule *module; /* GRASS module for parsing arguments */
struct Option *map_in, *map_out;
struct Option *cat_opt, *field_opt, *where_opt, *abcol, *afcol;
struct Option *iter_opt, *error_opt;
struct Flag *geo_f, *add_f;
int chcat, with_z;
int layer, mask_type;
struct varray *varray;
dglGraph_s *graph;
int i, geo, nnodes, nlines, j, max_cat;
char buf[2000], *covered;
/* initialize GIS environment */
G_gisinit(argv[0]); /* reads grass env, stores program name to G_program_name() */
/* initialize module */
module = G_define_module();
module->keywords = _("vector, network, centrality measures");
module->description =
_("Computes degree, centrality, betweeness, closeness and eigenvector "
"centrality measures in the network.");
/* Define the different options as defined in gis.h */
map_in = G_define_standard_option(G_OPT_V_INPUT);
field_opt = G_define_standard_option(G_OPT_V_FIELD);
map_out = G_define_standard_option(G_OPT_V_OUTPUT);
cat_opt = G_define_standard_option(G_OPT_V_CATS);
cat_opt->guisection = _("Selection");
where_opt = G_define_standard_option(G_OPT_WHERE);
where_opt->guisection = _("Selection");
afcol = G_define_standard_option(G_OPT_COLUMN);
afcol->key = "afcolumn";
afcol->required = NO;
afcol->description =
_("Name of arc forward/both direction(s) cost column");
afcol->guisection = _("Cost");
abcol = G_define_standard_option(G_OPT_COLUMN);
abcol->key = "abcolumn";
abcol->required = NO;
abcol->description = _("Name of arc backward direction cost column");
abcol->guisection = _("Cost");
deg_opt = G_define_standard_option(G_OPT_COLUMN);
deg_opt->key = "degree";
deg_opt->required = NO;
deg_opt->description = _("Name of degree centrality column");
deg_opt->guisection = _("Columns");
close_opt = G_define_standard_option(G_OPT_COLUMN);
close_opt->key = "closeness";
close_opt->required = NO;
close_opt->description = _("Name of closeness centrality column");
close_opt->guisection = _("Columns");
betw_opt = G_define_standard_option(G_OPT_COLUMN);
betw_opt->key = "betweenness";
betw_opt->required = NO;
betw_opt->description = _("Name of betweenness centrality column");
betw_opt->guisection = _("Columns");
eigen_opt = G_define_standard_option(G_OPT_COLUMN);
eigen_opt->key = "eigenvector";
eigen_opt->required = NO;
eigen_opt->description = _("Name of eigenvector centrality column");
eigen_opt->guisection = _("Columns");
iter_opt = G_define_option();
iter_opt->key = "iterations";
iter_opt->answer = "1000";
iter_opt->type = TYPE_INTEGER;
iter_opt->required = NO;
iter_opt->description =
_("Maximum number of iterations to compute eigenvector centrality");
error_opt = G_define_option();
error_opt->key = "error";
error_opt->answer = "0.1";
error_opt->type = TYPE_DOUBLE;
error_opt->required = NO;
error_opt->description =
_("Cummulative error tolerance for eigenvector centrality");
geo_f = G_define_flag();
geo_f->key = 'g';
geo_f->description =
_("Use geodesic calculation for longitude-latitude locations");
add_f = G_define_flag();
add_f->key = 'a';
add_f->description = _("Add points on nodes");
/* options and flags parser */
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
/* TODO: make an option for this */
mask_type = GV_LINE | GV_BOUNDARY;
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
Vect_check_input_output_name(map_in->answer, map_out->answer,
GV_FATAL_EXIT);
Vect_set_open_level(2);
if (1 > Vect_open_old(&In, map_in->answer, ""))
G_fatal_error(_("Unable to open vector map <%s>"), map_in->answer);
with_z = Vect_is_3d(&In);
if (0 > Vect_open_new(&Out, map_out->answer, with_z)) {
Vect_close(&In);
G_fatal_error(_("Unable to create vector map <%s>"), map_out->answer);
}
if (geo_f->answer) {
geo = 1;
if (G_projection() != PROJECTION_LL)
G_warning(_("The current projection is not longitude-latitude"));
}
else
geo = 0;
/* parse filter option and select appropriate lines */
layer = atoi(field_opt->answer);
chcat =
(NetA_initialise_varray
(&In, layer, mask_type, where_opt->answer, cat_opt->answer,
&varray) == 1);
/* Create table */
Fi = Vect_default_field_info(&Out, 1, NULL, GV_1TABLE);
Vect_map_add_dblink(&Out, 1, NULL, Fi->table, "cat", Fi->database,
Fi->driver);
db_init_string(&sql);
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
db_init_string(&tmp);
if (deg_opt->answer)
append_string(&tmp, deg_opt->answer);
if (close_opt->answer)
append_string(&tmp, close_opt->answer);
if (betw_opt->answer)
append_string(&tmp, betw_opt->answer);
if (eigen_opt->answer)
append_string(&tmp, eigen_opt->answer);
sprintf(buf,
"create table %s(cat integer%s)", Fi->table, db_get_string(&tmp));
db_set_string(&sql, buf);
G_debug(2, db_get_string(&sql));
if (db_execute_immediate(driver, &sql) != DB_OK) {
db_close_database_shutdown_driver(driver);
G_fatal_error(_("Unable to create table: '%s'"), db_get_string(&sql));
}
if (db_create_index2(driver, Fi->table, "cat") != DB_OK)
G_warning(_("Cannot create index"));
if (db_grant_on_table
(driver, Fi->table, DB_PRIV_SELECT, DB_GROUP | DB_PUBLIC) != DB_OK)
G_fatal_error(_("Cannot grant privileges on table <%s>"), Fi->table);
db_begin_transaction(driver);
Vect_copy_head_data(&In, &Out);
Vect_hist_copy(&In, &Out);
Vect_hist_command(&Out);
Vect_net_build_graph(&In, mask_type, atoi(field_opt->answer), 0,
afcol->answer, abcol->answer, NULL, geo, 0);
graph = &(In.graph);
nnodes = dglGet_NodeCount(graph);
deg = closeness = betw = eigen = NULL;
covered = (char *)G_calloc(nnodes + 1, sizeof(char));
if (!covered)
G_fatal_error(_("Out of memory"));
if (deg_opt->answer) {
deg = (double *)G_calloc(nnodes + 1, sizeof(double));
if (!deg)
G_fatal_error(_("Out of memory"));
}
if (close_opt->answer) {
closeness = (double *)G_calloc(nnodes + 1, sizeof(double));
if (!closeness)
G_fatal_error(_("Out of memory"));
}
if (betw_opt->answer) {
betw = (double *)G_calloc(nnodes + 1, sizeof(double));
if (!betw)
G_fatal_error(_("Out of memory"));
}
if (eigen_opt->answer) {
eigen = (double *)G_calloc(nnodes + 1, sizeof(double));
if (!eigen)
G_fatal_error(_("Out of memory"));
}
if (deg_opt->answer) {
G_message(_("Computing degree centrality measure"));
NetA_degree_centrality(graph, deg);
}
if (betw_opt->answer || close_opt->answer) {
G_message(_("Computing betweenness and/or closeness centrality measure"));
NetA_betweenness_closeness(graph, betw, closeness);
if (closeness)
for (i = 1; i <= nnodes; i++)
closeness[i] /= (double)In.cost_multip;
}
if (eigen_opt->answer) {
G_message(_("Computing eigenvector centrality measure"));
NetA_eigenvector_centrality(graph, atoi(iter_opt->answer),
atof(error_opt->answer), eigen);
}
nlines = Vect_get_num_lines(&In);
G_message(_("Writing data into the table..."));
G_percent_reset();
for (i = 1; i <= nlines; i++) {
G_percent(i, nlines, 1);
int type = Vect_read_line(&In, Points, Cats, i);
if (type == GV_POINT && (!chcat || varray->c[i])) {
int cat, node;
if (!Vect_cat_get(Cats, layer, &cat))
continue;
Vect_reset_cats(Cats);
Vect_cat_set(Cats, 1, cat);
Vect_write_line(&Out, type, Points, Cats);
Vect_get_line_nodes(&In, i, &node, NULL);
process_node(node, cat);
covered[node] = 1;
}
}
if (add_f->answer && !chcat) {
max_cat = 0;
for (i = 1; i <= nlines; i++) {
Vect_read_line(&In, NULL, Cats, i);
for (j = 0; j < Cats->n_cats; j++)
if (Cats->cat[j] > max_cat)
max_cat = Cats->cat[j];
}
max_cat++;
for (i = 1; i <= nnodes; i++)
if (!covered[i]) {
Vect_reset_cats(Cats);
Vect_cat_set(Cats, 1, max_cat);
NetA_add_point_on_node(&In, &Out, i, Cats);
process_node(i, max_cat);
max_cat++;
}
}
db_commit_transaction(driver);
db_close_database_shutdown_driver(driver);
G_free(covered);
if (deg)
G_free(deg);
if (closeness)
G_free(closeness);
if (betw)
G_free(betw);
if (eigen)
G_free(eigen);
Vect_build(&Out);
Vect_close(&In);
Vect_close(&Out);
exit(EXIT_SUCCESS);
}
/*----------------------------------------------------------------------------------------------------------*/
int main(int argc, char *argv[])
{
/* Declarations */
int dim_vect, nparameters, BW, npoints;
int nsply, nsplx, nsplx_adj, nsply_adj;
int nsubregion_col, nsubregion_row;
int subregion = 0, nsubregions = 0;
const char *dvr, *db, *mapset;
char table_name[GNAME_MAX];
char xname[GNAME_MAX], xmapset[GMAPSET_MAX];
double lambda, mean, stepN, stepE, HighThresh,
LowThresh;
double N_extension, E_extension, edgeE, edgeN;
int i, nterrain, count_terrain;
int last_row, last_column, flag_auxiliar = FALSE;
int *lineVect;
double *TN, *Q, *parVect; /* Interpolating and least-square vectors */
double **N, **obsVect, **obsVect_all; /* Interpolation and least-square matrix */
struct Map_info In, Out, Terrain;
struct Option *in_opt, *out_opt, *out_terrain_opt, *stepE_opt,
*stepN_opt, *lambda_f_opt, *Thresh_A_opt, *Thresh_B_opt;
struct Flag *spline_step_flag;
struct GModule *module;
struct Cell_head elaboration_reg, original_reg;
struct Reg_dimens dims;
struct bound_box general_box, overlap_box;
struct Point *observ;
struct lidar_cat *lcat;
dbDriver *driver;
/*----------------------------------------------------------------------------------------------------------*/
/* Options' declaration */
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("LIDAR"));
module->description =
_("Corrects the v.lidar.growing output. It is the last of the three algorithms for LIDAR filtering.");
spline_step_flag = G_define_flag();
spline_step_flag->key = 'e';
spline_step_flag->label = _("Estimate point density and distance");
spline_step_flag->description =
_("Estimate point density and distance for the input vector points within the current region extends and quit");
in_opt = G_define_standard_option(G_OPT_V_INPUT);
in_opt->description =
_("Input observation vector map name (v.lidar.growing output)");
out_opt = G_define_standard_option(G_OPT_V_OUTPUT);
out_opt->description = _("Output classified vector map name");
out_terrain_opt = G_define_option();
out_terrain_opt->key = "terrain";
out_terrain_opt->type = TYPE_STRING;
out_terrain_opt->key_desc = "name";
out_terrain_opt->required = YES;
out_terrain_opt->gisprompt = "new,vector,vector";
out_terrain_opt->description =
_("Only 'terrain' points output vector map");
stepE_opt = G_define_option();
stepE_opt->key = "ew_step";
stepE_opt->type = TYPE_DOUBLE;
stepE_opt->required = NO;
stepE_opt->answer = "25";
stepE_opt->description =
_("Length of each spline step in the east-west direction");
stepE_opt->guisection = _("Settings");
stepN_opt = G_define_option();
stepN_opt->key = "ns_step";
stepN_opt->type = TYPE_DOUBLE;
stepN_opt->required = NO;
stepN_opt->answer = "25";
stepN_opt->description =
_("Length of each spline step in the north-south direction");
stepN_opt->guisection = _("Settings");
lambda_f_opt = G_define_option();
lambda_f_opt->key = "lambda_c";
lambda_f_opt->type = TYPE_DOUBLE;
lambda_f_opt->required = NO;
lambda_f_opt->description =
_("Regularization weight in reclassification evaluation");
lambda_f_opt->answer = "1";
Thresh_A_opt = G_define_option();
Thresh_A_opt->key = "tch";
Thresh_A_opt->type = TYPE_DOUBLE;
Thresh_A_opt->required = NO;
Thresh_A_opt->description =
_("High threshold for object to terrain reclassification");
Thresh_A_opt->answer = "2";
Thresh_B_opt = G_define_option();
Thresh_B_opt->key = "tcl";
Thresh_B_opt->type = TYPE_DOUBLE;
Thresh_B_opt->required = NO;
Thresh_B_opt->description =
_("Low threshold for terrain to object reclassification");
Thresh_B_opt->answer = "1";
/* Parsing */
G_gisinit(argv[0]);
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
stepN = atof(stepN_opt->answer);
stepE = atof(stepE_opt->answer);
lambda = atof(lambda_f_opt->answer);
HighThresh = atof(Thresh_A_opt->answer);
LowThresh = atof(Thresh_B_opt->answer);
if (!(db = G_getenv_nofatal2("DB_DATABASE", G_VAR_MAPSET)))
G_fatal_error(_("Unable to read name of database"));
if (!(dvr = G_getenv_nofatal2("DB_DRIVER", G_VAR_MAPSET)))
G_fatal_error(_("Unable to read name of driver"));
/* Setting auxiliar table's name */
if (G_name_is_fully_qualified(out_opt->answer, xname, xmapset)) {
sprintf(table_name, "%s_aux", xname);
}
else
sprintf(table_name, "%s_aux", out_opt->answer);
/* Something went wrong in a previous v.lidar.correction execution */
if (db_table_exists(dvr, db, table_name)) {
/* Start driver and open db */
driver = db_start_driver_open_database(dvr, db);
if (driver == NULL)
G_fatal_error(_("No database connection for driver <%s> is defined. Run db.connect."),
dvr);
db_set_error_handler_driver(driver);
if (P_Drop_Aux_Table(driver, table_name) != DB_OK)
G_fatal_error(_("Old auxiliar table could not be dropped"));
db_close_database_shutdown_driver(driver);
}
/* Checking vector names */
Vect_check_input_output_name(in_opt->answer, out_opt->answer,
G_FATAL_EXIT);
/* Open input vector */
if ((mapset = G_find_vector2(in_opt->answer, "")) == NULL)
G_fatal_error(_("Vector map <%s> not found"), in_opt->answer);
Vect_set_open_level(1); /* without topology */
if (1 > Vect_open_old(&In, in_opt->answer, mapset))
G_fatal_error(_("Unable to open vector map <%s>"), in_opt->answer);
/* Input vector must be 3D */
if (!Vect_is_3d(&In))
G_fatal_error(_("Input vector map <%s> is not 3D!"), in_opt->answer);
/* Estimate point density and mean distance for current region */
if (spline_step_flag->answer) {
double dens, dist;
if (P_estimate_splinestep(&In, &dens, &dist) == 0) {
G_message("Estimated point density: %.4g", dens);
G_message("Estimated mean distance between points: %.4g", dist);
}
else
G_warning(_("No points in current region!"));
Vect_close(&In);
exit(EXIT_SUCCESS);
}
/* Open output vector */
if (0 > Vect_open_new(&Out, out_opt->answer, WITH_Z)) {
Vect_close(&In);
G_fatal_error(_("Unable to create vector map <%s>"), out_opt->answer);
}
if (0 > Vect_open_new(&Terrain, out_terrain_opt->answer, WITH_Z)) {
Vect_close(&In);
Vect_close(&Out);
G_fatal_error(_("Unable to create vector map <%s>"), out_opt->answer);
}
/* Copy vector Head File */
Vect_copy_head_data(&In, &Out);
Vect_hist_copy(&In, &Out);
Vect_hist_command(&Out);
Vect_copy_head_data(&In, &Terrain);
Vect_hist_copy(&In, &Terrain);
Vect_hist_command(&Terrain);
/* Start driver and open db */
driver = db_start_driver_open_database(dvr, db);
if (driver == NULL)
G_fatal_error(_("No database connection for driver <%s> is defined. Run db.connect."),
dvr);
db_set_error_handler_driver(driver);
/* Create auxiliar table */
if ((flag_auxiliar =
P_Create_Aux2_Table(driver, table_name)) == FALSE) {
Vect_close(&In);
Vect_close(&Out);
Vect_close(&Terrain);
exit(EXIT_FAILURE);
}
db_create_index2(driver, table_name, "ID");
/* sqlite likes that ??? */
db_close_database_shutdown_driver(driver);
driver = db_start_driver_open_database(dvr, db);
/* Setting regions and boxes */
G_get_set_window(&original_reg);
G_get_set_window(&elaboration_reg);
Vect_region_box(&elaboration_reg, &overlap_box);
Vect_region_box(&elaboration_reg, &general_box);
/*------------------------------------------------------------------
| Subdividing and working with tiles:
| Each original region will be divided into several subregions.
| Each one will be overlaped by its neighbouring subregions.
| The overlapping is calculated as a fixed OVERLAP_SIZE times
| the largest spline step plus 2 * edge
----------------------------------------------------------------*/
/* Fixing parameters of the elaboration region */
P_zero_dim(&dims);
nsplx_adj = NSPLX_MAX;
nsply_adj = NSPLY_MAX;
if (stepN > stepE)
dims.overlap = OVERLAP_SIZE * stepN;
else
dims.overlap = OVERLAP_SIZE * stepE;
P_get_edge(P_BILINEAR, &dims, stepE, stepN);
P_set_dim(&dims, stepE, stepN, &nsplx_adj, &nsply_adj);
G_verbose_message(n_("adjusted EW spline %d",
"adjusted EW splines %d",
nsplx_adj), nsplx_adj);
G_verbose_message(n_("adjusted NS spline %d",
"adjusted NS splines %d",
nsply_adj), nsply_adj);
/* calculate number of subregions */
edgeE = dims.ew_size - dims.overlap - 2 * dims.edge_v;
edgeN = dims.sn_size - dims.overlap - 2 * dims.edge_h;
N_extension = original_reg.north - original_reg.south;
E_extension = original_reg.east - original_reg.west;
nsubregion_col = ceil(E_extension / edgeE) + 0.5;
nsubregion_row = ceil(N_extension / edgeN) + 0.5;
if (nsubregion_col < 0)
nsubregion_col = 0;
if (nsubregion_row < 0)
nsubregion_row = 0;
nsubregions = nsubregion_row * nsubregion_col;
elaboration_reg.south = original_reg.north;
last_row = FALSE;
while (last_row == FALSE) { /* For each row */
P_set_regions(&elaboration_reg, &general_box, &overlap_box, dims,
GENERAL_ROW);
if (elaboration_reg.north > original_reg.north) { /* First row */
P_set_regions(&elaboration_reg, &general_box, &overlap_box, dims,
FIRST_ROW);
}
if (elaboration_reg.south <= original_reg.south) { /* Last row */
P_set_regions(&elaboration_reg, &general_box, &overlap_box, dims,
LAST_ROW);
last_row = TRUE;
}
nsply =
ceil((elaboration_reg.north -
elaboration_reg.south) / stepN) + 0.5;
/*
if (nsply > NSPLY_MAX) {
nsply = NSPLY_MAX;
}
*/
G_debug(1, _("nsply = %d"), nsply);
elaboration_reg.east = original_reg.west;
last_column = FALSE;
while (last_column == FALSE) { /* For each column */
subregion++;
if (nsubregions > 1)
G_message(_("subregion %d of %d"), subregion, nsubregions);
P_set_regions(&elaboration_reg, &general_box, &overlap_box, dims,
GENERAL_COLUMN);
if (elaboration_reg.west < original_reg.west) { /* First column */
P_set_regions(&elaboration_reg, &general_box, &overlap_box,
dims, FIRST_COLUMN);
}
if (elaboration_reg.east >= original_reg.east) { /* Last column */
P_set_regions(&elaboration_reg, &general_box, &overlap_box,
dims, LAST_COLUMN);
last_column = TRUE;
}
nsplx =
ceil((elaboration_reg.east - elaboration_reg.west) / stepE) +
0.5;
/*
if (nsplx > NSPLX_MAX) {
nsplx = NSPLX_MAX;
}
*/
G_debug(1, _("nsplx = %d"), nsplx);
dim_vect = nsplx * nsply;
G_debug(1, _("read vector region map"));
observ =
P_Read_Vector_Correction(&In, &elaboration_reg, &npoints,
&nterrain, dim_vect, &lcat);
G_debug(5, _("npoints = %d, nterrain = %d"), npoints, nterrain);
if (npoints > 0) { /* If there is any point falling into elaboration_reg. */
count_terrain = 0;
nparameters = nsplx * nsply;
/* Mean calculation */
G_debug(3, _("Mean calculation"));
mean = P_Mean_Calc(&elaboration_reg, observ, npoints);
/*Least Squares system */
BW = P_get_BandWidth(P_BILINEAR, nsply); /* Bilinear interpolation */
N = G_alloc_matrix(nparameters, BW); /* Normal matrix */
TN = G_alloc_vector(nparameters); /* vector */
parVect = G_alloc_vector(nparameters); /* Bilinear parameters vector */
obsVect = G_alloc_matrix(nterrain + 1, 3); /* Observation vector with terrain points */
obsVect_all = G_alloc_matrix(npoints + 1, 3); /* Observation vector with all points */
Q = G_alloc_vector(nterrain + 1); /* "a priori" var-cov matrix */
lineVect = G_alloc_ivector(npoints + 1);
/* Setting obsVect vector & Q matrix */
G_debug(3, _("Only TERRAIN points"));
for (i = 0; i < npoints; i++) {
if (observ[i].cat == TERRAIN_SINGLE) {
obsVect[count_terrain][0] = observ[i].coordX;
obsVect[count_terrain][1] = observ[i].coordY;
obsVect[count_terrain][2] = observ[i].coordZ - mean;
Q[count_terrain] = 1; /* Q=I */
count_terrain++;
}
lineVect[i] = observ[i].lineID;
obsVect_all[i][0] = observ[i].coordX;
obsVect_all[i][1] = observ[i].coordY;
obsVect_all[i][2] = observ[i].coordZ - mean;
}
G_free(observ);
G_verbose_message(_("Bilinear interpolation"));
normalDefBilin(N, TN, Q, obsVect, stepE, stepN, nsplx,
nsply, elaboration_reg.west,
elaboration_reg.south, nterrain, nparameters,
BW);
nCorrectGrad(N, lambda, nsplx, nsply, stepE, stepN);
G_math_solver_cholesky_sband(N, parVect, TN, nparameters, BW);
G_free_matrix(N);
G_free_vector(TN);
G_free_vector(Q);
G_free_matrix(obsVect);
G_verbose_message( _("Correction and creation of terrain vector"));
P_Sparse_Correction(&In, &Out, &Terrain, &elaboration_reg,
general_box, overlap_box, obsVect_all, lcat,
parVect, lineVect, stepN, stepE,
dims.overlap, HighThresh, LowThresh,
nsplx, nsply, npoints, driver, mean, table_name);
G_free_vector(parVect);
G_free_matrix(obsVect_all);
G_free_ivector(lineVect);
}
else {
G_free(observ);
G_warning(_("No data within this subregion. "
"Consider changing the spline step."));
}
G_free(lcat);
} /*! END WHILE; last_column = TRUE */
} /*! END WHILE; last_row = TRUE */
/* Dropping auxiliar table */
if (npoints > 0) {
G_debug(1, _("Dropping <%s>"), table_name);
if (P_Drop_Aux_Table(driver, table_name) != DB_OK)
G_fatal_error(_("Auxiliar table could not be dropped"));
}
db_close_database_shutdown_driver(driver);
Vect_close(&In);
Vect_close(&Out);
Vect_close(&Terrain);
G_done_msg(" ");
exit(EXIT_SUCCESS);
} /*! END MAIN */
int display_attr(struct Map_info *Map, int type, char *attrcol,
struct cat_list *Clist, LATTR *lattr, int chcat)
{
int i, ltype, more;
struct line_pnts *Points;
struct line_cats *Cats;
int cat;
char buf[2000];
struct field_info *fi;
dbDriver *driver;
dbString stmt, valstr, text;
dbCursor cursor;
dbTable *table;
dbColumn *column;
G_debug(2, "attr()");
if (attrcol == NULL || *attrcol == '\0') {
G_fatal_error(_("attrcol not specified, cannot display attributes"));
}
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
db_init_string(&stmt);
db_init_string(&valstr);
db_init_string(&text);
fi = Vect_get_field(Map, lattr->field);
if (fi == NULL)
return 1;
driver = db_start_driver_open_database(fi->driver, fi->database);
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
fi->database,
fi->driver);
Vect_rewind(Map);
while (1) {
ltype = Vect_read_next_line(Map, Points, Cats);
if (ltype == -1)
G_fatal_error(_("Unable to read vector map"));
else if (ltype == -2) /* EOF */
break;
if (!(type & ltype) && !((type & GV_AREA) && (ltype & GV_CENTROID)))
continue; /* used for both lines and labels */
D_RGB_color(lattr->color.R, lattr->color.G, lattr->color.B);
D_text_size(lattr->size, lattr->size);
if (lattr->font)
D_font(lattr->font);
if (lattr->enc)
D_encoding(lattr->enc);
if (chcat) {
int found = 0;
for (i = 0; i < Cats->n_cats; i++) {
if (Cats->field[i] == Clist->field &&
Vect_cat_in_cat_list(Cats->cat[i], Clist)) {
found = 1;
break;
}
}
if (!found)
continue;
}
else if (Clist->field > 0) {
int found = 0;
for (i = 0; i < Cats->n_cats; i++) {
if (Cats->field[i] == Clist->field) {
found = 1;
break;
}
}
/* lines with no category will be displayed */
if (Cats->n_cats > 0 && !found)
continue;
}
if (Vect_cat_get(Cats, lattr->field, &cat)) {
int ncats = 0;
/* Read attribute from db */
db_free_string(&text);
for (i = 0; i < Cats->n_cats; i++) {
int nrows;
if (Cats->field[i] != lattr->field)
continue;
db_init_string(&stmt);
sprintf(buf, "select %s from %s where %s = %d", attrcol,
fi->table, fi->key, Cats->cat[i]);
G_debug(2, "SQL: %s", buf);
db_append_string(&stmt, buf);
if (db_open_select_cursor
(driver, &stmt, &cursor, DB_SEQUENTIAL) != DB_OK)
G_fatal_error(_("Unable to open select cursor: '%s'"),
db_get_string(&stmt));
nrows = db_get_num_rows(&cursor);
if (ncats > 0)
db_append_string(&text, "/");
if (nrows > 0) {
table = db_get_cursor_table(&cursor);
column = db_get_table_column(table, 0); /* first column */
if (db_fetch(&cursor, DB_NEXT, &more) != DB_OK)
continue;
db_convert_column_value_to_string(column, &valstr);
db_append_string(&text, db_get_string(&valstr));
}
else {
G_warning(_("No attribute found for cat %d: %s"), cat,
db_get_string(&stmt));
}
db_close_cursor(&cursor);
ncats++;
}
show_label_line(Points, ltype, lattr, db_get_string(&text));
}
}
db_close_database_shutdown_driver(driver);
Vect_destroy_line_struct(Points);
Vect_destroy_cats_struct(Cats);
return 0;
}
int main(int argc, char *argv[])
{
struct Option *vector_opt, *seed_opt, *flowlines_opt, *flowacc_opt, *sampled_opt,
*scalar_opt, *unit_opt, *step_opt, *limit_opt, *skip_opt, *dir_opt,
*error_opt;
struct Flag *table_fl;
struct GModule *module;
RASTER3D_Region region;
RASTER3D_Map *flowacc, *sampled;
struct Integration integration;
struct Seed seed;
struct Gradient_info gradient_info;
struct Map_info seed_Map;
struct line_pnts *seed_points;
struct line_cats *seed_cats;
struct Map_info fl_map;
struct line_cats *fl_cats; /* for flowlines */
struct line_pnts *fl_points; /* for flowlines */
struct field_info *finfo;
dbDriver *driver;
int cat; /* cat of flowlines */
int if_table;
int i, r, c, d;
char *desc;
int n_seeds, seed_count, ltype;
int skip[3];
G_gisinit(argv[0]);
module = G_define_module();
G_add_keyword(_("raster3d"));
G_add_keyword(_("hydrology"));
G_add_keyword(_("voxel"));
module->description =
_("Computes 3D flow lines and 3D flow accumulation.");
scalar_opt = G_define_standard_option(G_OPT_R3_INPUT);
scalar_opt->required = NO;
scalar_opt->guisection = _("Input");
vector_opt = G_define_standard_option(G_OPT_R3_INPUTS);
vector_opt->key = "vector_field";
vector_opt->required = NO;
vector_opt->description = _("Names of three 3D raster maps describing "
"x, y, z components of vector field");
vector_opt->guisection = _("Input");
seed_opt = G_define_standard_option(G_OPT_V_INPUT);
seed_opt->required = NO;
seed_opt->key = "seed_points";
seed_opt->description = _("If no map is provided, "
"flow lines are generated "
"from each cell of the input 3D raster");
seed_opt->label = _("Name of vector map with points "
"from which flow lines are generated");
seed_opt->guisection = _("Input");
flowlines_opt = G_define_standard_option(G_OPT_V_OUTPUT);
flowlines_opt->key = "flowline";
flowlines_opt->required = NO;
flowlines_opt->description = _("Name for vector map of flow lines");
flowlines_opt->guisection = _("Output");
flowacc_opt = G_define_standard_option(G_OPT_R3_OUTPUT);
flowacc_opt->key = "flowaccumulation";
flowacc_opt->required = NO;
flowacc_opt->description =
_("Name for output flowaccumulation 3D raster");
flowacc_opt->guisection = _("Output");
sampled_opt = G_define_standard_option(G_OPT_R3_INPUT);
sampled_opt->key = "sampled";
sampled_opt->required = NO;
sampled_opt->label =
_("Name for 3D raster sampled by flowlines");
sampled_opt->description =
_("Values of this 3D raster will be stored "
"as attributes of flowlines segments");
unit_opt = G_define_option();
unit_opt->key = "unit";
unit_opt->type = TYPE_STRING;
unit_opt->required = NO;
unit_opt->answer = "cell";
unit_opt->options = "time,length,cell";
desc = NULL;
G_asprintf(&desc,
"time;%s;"
"length;%s;"
"cell;%s",
_("elapsed time"),
_("length in map units"), _("length in cells (voxels)"));
unit_opt->descriptions = desc;
unit_opt->label = _("Unit of integration step");
unit_opt->description = _("Default unit is cell");
unit_opt->guisection = _("Integration");
step_opt = G_define_option();
step_opt->key = "step";
step_opt->type = TYPE_DOUBLE;
step_opt->required = NO;
step_opt->answer = "0.25";
step_opt->label = _("Integration step in selected unit");
step_opt->description = _("Default step is 0.25 cell");
step_opt->guisection = _("Integration");
limit_opt = G_define_option();
limit_opt->key = "limit";
limit_opt->type = TYPE_INTEGER;
limit_opt->required = NO;
limit_opt->answer = "2000";
limit_opt->description = _("Maximum number of steps");
limit_opt->guisection = _("Integration");
error_opt = G_define_option();
error_opt->key = "max_error";
error_opt->type = TYPE_DOUBLE;
error_opt->required = NO;
error_opt->answer = "1e-5";
error_opt->label = _("Maximum error of integration");
error_opt->description = _("Influences step, increase maximum error "
"to allow bigger steps");
error_opt->guisection = _("Integration");
skip_opt = G_define_option();
skip_opt->key = "skip";
skip_opt->type = TYPE_INTEGER;
skip_opt->required = NO;
skip_opt->multiple = YES;
skip_opt->description =
_("Number of cells between flow lines in x, y and z direction");
dir_opt = G_define_option();
dir_opt->key = "direction";
dir_opt->type = TYPE_STRING;
dir_opt->required = NO;
dir_opt->multiple = NO;
dir_opt->options = "up,down,both";
dir_opt->answer = "down";
dir_opt->description = _("Compute flowlines upstream, "
"downstream or in both direction.");
table_fl = G_define_flag();
table_fl->key = 'a';
table_fl->description = _("Create and fill attribute table");
G_option_required(scalar_opt, vector_opt, NULL);
G_option_exclusive(scalar_opt, vector_opt, NULL);
G_option_required(flowlines_opt, flowacc_opt, NULL);
G_option_requires(seed_opt, flowlines_opt, NULL);
G_option_requires(table_fl, flowlines_opt, NULL);
G_option_requires(sampled_opt, table_fl, NULL);
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
driver = NULL;
finfo = NULL;
if_table = table_fl->answer ? TRUE : FALSE;
check_vector_input_maps(vector_opt, seed_opt);
Rast3d_init_defaults();
Rast3d_get_window(®ion);
/* set up integration variables */
if (step_opt->answer) {
integration.step = atof(step_opt->answer);
integration.unit = unit_opt->answer;
}
else {
integration.unit = "cell";
integration.step = 0.25;
}
integration.max_error = atof(error_opt->answer);
integration.max_step = 5 * integration.step;
integration.min_step = integration.step / 5;
integration.limit = atof(limit_opt->answer);
if (strcmp(dir_opt->answer, "up") == 0)
integration.direction_type = FLOWDIR_UP;
else if (strcmp(dir_opt->answer, "down") == 0)
integration.direction_type = FLOWDIR_DOWN;
else
integration.direction_type = FLOWDIR_BOTH;
/* cell size is the diagonal */
integration.cell_size = sqrt(region.ns_res * region.ns_res +
region.ew_res * region.ew_res +
region.tb_res * region.tb_res);
/* set default skip if needed */
if (skip_opt->answers) {
for (i = 0; i < 3; i++) {
if (skip_opt->answers[i] != NULL) {
skip[i] = atoi(skip_opt->answers[i]);
}
else {
G_fatal_error(_("Please provide 3 integer values for skip option."));
}
}
}
else {
skip[0] = fmax(1, region.cols / 10);
skip[1] = fmax(1, region.rows / 10);
skip[2] = fmax(1, region.depths / 10);
}
/* open raster 3D maps of velocity components */
gradient_info.initialized = FALSE;
load_input_raster3d_maps(scalar_opt, vector_opt, &gradient_info, ®ion);
/* open new 3D raster map of flowacumulation */
if (flowacc_opt->answer) {
flowacc = Rast3d_open_new_opt_tile_size(flowacc_opt->answer,
RASTER3D_USE_CACHE_DEFAULT,
®ion, FCELL_TYPE, 32);
if (!flowacc)
Rast3d_fatal_error(_("Unable to open 3D raster map <%s>"),
flowacc_opt->answer);
init_flowaccum(®ion, flowacc);
}
/* open 3D raster map used for sampling */
if (sampled_opt->answer) {
sampled = Rast3d_open_cell_old(sampled_opt->answer,
G_find_raster3d(sampled_opt->answer, ""),
®ion, RASTER3D_TILE_SAME_AS_FILE,
RASTER3D_USE_CACHE_DEFAULT);
if (!sampled)
Rast3d_fatal_error(_("Unable to open 3D raster map <%s>"),
sampled_opt->answer);
}
else
sampled = NULL;
/* open new vector map of flowlines */
if (flowlines_opt->answer) {
fl_cats = Vect_new_cats_struct();
fl_points = Vect_new_line_struct();
if (Vect_open_new(&fl_map, flowlines_opt->answer, TRUE) < 0)
G_fatal_error(_("Unable to create vector map <%s>"),
flowlines_opt->answer);
Vect_hist_command(&fl_map);
if (if_table) {
create_table(&fl_map, &finfo, &driver,
gradient_info.compute_gradient, sampled ? 1 : 0);
}
}
n_seeds = 0;
/* open vector map of seeds */
if (seed_opt->answer) {
if (Vect_open_old2(&seed_Map, seed_opt->answer, "", "1") < 0)
G_fatal_error(_("Unable to open vector map <%s>"),
seed_opt->answer);
if (!Vect_is_3d(&seed_Map))
G_fatal_error(_("Vector map <%s> is not 3D"), seed_opt->answer);
n_seeds = Vect_get_num_primitives(&seed_Map, GV_POINT);
}
if (flowacc_opt->answer || (!seed_opt->answer && flowlines_opt->answer)) {
if (flowacc_opt->answer)
n_seeds += region.cols * region.rows * region.depths;
else {
n_seeds += ceil(region.cols / (double)skip[0]) *
ceil(region.rows / (double)skip[1]) *
ceil(region.depths / (double)skip[2]);
}
}
G_debug(1, "Number of seeds is %d", n_seeds);
seed_count = 0;
cat = 1;
if (seed_opt->answer) {
seed_points = Vect_new_line_struct();
seed_cats = Vect_new_cats_struct();
/* compute flowlines from vector seed map */
while (TRUE) {
ltype = Vect_read_next_line(&seed_Map, seed_points, seed_cats);
if (ltype == -1) {
Vect_close(&seed_Map);
G_fatal_error(_("Error during reading seed vector map"));
}
else if (ltype == -2) {
break;
}
else if (ltype == GV_POINT) {
seed.x = seed_points->x[0];
seed.y = seed_points->y[0];
seed.z = seed_points->z[0];
seed.flowline = TRUE;
seed.flowaccum = FALSE;
}
G_percent(seed_count, n_seeds, 1);
if (integration.direction_type == FLOWDIR_UP ||
integration.direction_type == FLOWDIR_BOTH) {
integration.actual_direction = FLOWDIR_UP;
compute_flowline(®ion, &seed, &gradient_info, flowacc, sampled,
&integration, &fl_map, fl_cats, fl_points,
&cat, if_table, finfo, driver);
}
if (integration.direction_type == FLOWDIR_DOWN ||
integration.direction_type == FLOWDIR_BOTH) {
integration.actual_direction = FLOWDIR_DOWN;
compute_flowline(®ion, &seed, &gradient_info, flowacc, sampled,
&integration, &fl_map, fl_cats, fl_points,
&cat, if_table, finfo, driver);
}
seed_count++;
}
Vect_destroy_line_struct(seed_points);
Vect_destroy_cats_struct(seed_cats);
Vect_close(&seed_Map);
}
if (flowacc_opt->answer || (!seed_opt->answer && flowlines_opt->answer)) {
/* compute flowlines from points on grid */
for (r = region.rows; r > 0; r--) {
for (c = 0; c < region.cols; c++) {
for (d = 0; d < region.depths; d++) {
seed.x =
region.west + c * region.ew_res + region.ew_res / 2;
seed.y =
region.south + r * region.ns_res - region.ns_res / 2;
seed.z =
region.bottom + d * region.tb_res + region.tb_res / 2;
seed.flowline = FALSE;
seed.flowaccum = FALSE;
if (flowacc_opt->answer)
seed.flowaccum = TRUE;
if (flowlines_opt->answer && !seed_opt->answer &&
(c % skip[0] == 0) && (r % skip[1] == 0) && (d % skip[2] == 0))
seed.flowline = TRUE;
if (seed.flowaccum || seed.flowline) {
G_percent(seed_count, n_seeds, 1);
if (integration.direction_type == FLOWDIR_UP ||
integration.direction_type == FLOWDIR_BOTH) {
integration.actual_direction = FLOWDIR_UP;
compute_flowline(®ion, &seed, &gradient_info,
flowacc, sampled, &integration, &fl_map,
fl_cats, fl_points, &cat,
if_table, finfo, driver);
}
if (integration.direction_type == FLOWDIR_DOWN ||
integration.direction_type == FLOWDIR_BOTH) {
integration.actual_direction = FLOWDIR_DOWN;
compute_flowline(®ion, &seed, &gradient_info,
flowacc, sampled, &integration, &fl_map,
fl_cats, fl_points, &cat,
if_table, finfo, driver);
}
seed_count++;
}
}
}
}
}
G_percent(1, 1, 1);
if (flowlines_opt->answer) {
if (if_table) {
db_commit_transaction(driver);
db_close_database_shutdown_driver(driver);
}
Vect_destroy_line_struct(fl_points);
Vect_destroy_cats_struct(fl_cats);
Vect_build(&fl_map);
Vect_close(&fl_map);
}
if (flowacc_opt->answer)
Rast3d_close(flowacc);
return EXIT_SUCCESS;
}
int main(int argc, char *argv[])
{
struct GModule *module;
struct Option *map_opt, *type_opt, *field_opt, *col_opt, *where_opt,
*percentile;
struct Flag *shell_flag, *extended;
struct Map_info Map;
struct field_info *Fi;
dbDriver *Driver;
dbCatValArray Cvarr;
struct line_pnts *Points;
struct line_cats *Cats;
int otype, ofield;
int compatible = 1; /* types are compatible: point+centroid or line+boundary or area */
int nrec, ctype, nlines, line, nareas, area;
int nmissing = 0; /* number of missing atttributes */
int nnull = 0; /* number of null values */
int first = 1;
/* Statistics */
int count = 0; /* number of features with non-null attribute */
double sum = 0.0;
double sumsq = 0.0;
double sumcb = 0.0;
double sumqt = 0.0;
double sum_abs = 0.0;
double min = 0.0 / 0.0; /* init as nan */
double max = 0.0 / 0.0;
double mean, mean_abs, pop_variance, sample_variance, pop_stdev,
sample_stdev, pop_coeff_variation, kurtosis, skewness;
double total_size = 0.0; /* total size: length/area */
/* Extended statistics */
int perc;
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("statistics"));
module->label =
_("Calculates univariate statistics for attribute.");
module->description = _("Variance and standard "
"deviation is calculated only for points if specified.");
map_opt = G_define_standard_option(G_OPT_V_MAP);
field_opt = G_define_standard_option(G_OPT_V_FIELD);
type_opt = G_define_standard_option(G_OPT_V_TYPE);
type_opt->options = "point,line,boundary,centroid,area";
col_opt = G_define_standard_option(G_OPT_DB_COLUMN);
col_opt->required = YES;
where_opt = G_define_standard_option(G_OPT_DB_WHERE);
percentile = G_define_option();
percentile->key = "percentile";
percentile->type = TYPE_INTEGER;
percentile->required = NO;
percentile->options = "0-100";
percentile->answer = "90";
percentile->description =
_("Percentile to calculate (requires extended statistics flag)");
shell_flag = G_define_flag();
shell_flag->key = 'g';
shell_flag->description = _("Print the stats in shell script style");
extended = G_define_flag();
extended->key = 'e';
extended->description = _("Calculate extended statistics");
G_gisinit(argv[0]);
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
otype = Vect_option_to_types(type_opt);
perc = atoi(percentile->answer);
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
/* open input vector */
Vect_set_open_level(2);
Vect_open_old2(&Map, map_opt->answer, "", field_opt->answer);
ofield = Vect_get_field_number(&Map, field_opt->answer);
/* Check if types are compatible */
if ((otype & GV_POINTS) && ((otype & GV_LINES) || (otype & GV_AREA)))
compatible = 0;
if ((otype & GV_LINES) && (otype & GV_AREA))
compatible = 0;
if (!compatible) {
G_warning(_("Incompatible vector type(s) specified, only number of features, minimum, maximum and range "
"can be calculated"));
}
if (extended->answer && !(otype & GV_POINTS)) {
G_warning(_("Extended statistics is currently supported only for points/centroids"));
}
/* Read attributes */
db_CatValArray_init(&Cvarr);
Fi = Vect_get_field(&Map, ofield);
if (Fi == NULL) {
G_fatal_error(_(" Database connection not defined for layer <%s>"), field_opt->answer);
}
Driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (Driver == NULL)
G_fatal_error("Unable to open database <%s> by driver <%s>",
Fi->database, Fi->driver);
/* Note do not check if the column exists in the table because it may be an expression */
nrec =
db_select_CatValArray(Driver, Fi->table, Fi->key, col_opt->answer,
where_opt->answer, &Cvarr);
G_debug(2, "nrec = %d", nrec);
ctype = Cvarr.ctype;
if (ctype != DB_C_TYPE_INT && ctype != DB_C_TYPE_DOUBLE)
G_fatal_error(_("Column type not supported"));
if (nrec < 0)
G_fatal_error(_("Unable to select data from table"));
db_close_database_shutdown_driver(Driver);
/* Lines */
nlines = Vect_get_num_lines(&Map);
for (line = 1; line <= nlines; line++) {
int i, type;
G_debug(3, "line = %d", line);
type = Vect_read_line(&Map, Points, Cats, line);
if (!(type & otype))
continue;
for (i = 0; i < Cats->n_cats; i++) {
if (Cats->field[i] == ofield) {
double val;
dbCatVal *catval;
G_debug(3, "cat = %d", Cats->cat[i]);
if (db_CatValArray_get_value(&Cvarr, Cats->cat[i], &catval) !=
DB_OK) {
G_debug(3, "No record for cat = %d", Cats->cat[i]);
nmissing++;
continue;
}
if (catval->isNull) {
G_debug(3, "NULL value for cat = %d", Cats->cat[i]);
nnull++;
continue;
}
if (ctype == DB_C_TYPE_INT) {
val = catval->val.i;
}
else if (ctype == DB_C_TYPE_DOUBLE) {
val = catval->val.d;
}
count++;
if (first) {
max = val;
min = val;
first = 0;
}
else {
if (val > max)
max = val;
if (val < min)
min = val;
}
if (compatible) {
if (type & GV_POINTS) {
sum += val;
sumsq += val * val;
sumcb += val * val * val;
sumqt += val * val * val * val;
sum_abs += fabs(val);
}
else { /* GV_LINES */
double l;
l = Vect_line_length(Points);
sum += l * val;
sumsq += l * val * val;
sumcb += l * val * val * val;
sumqt += l * val * val * val * val;
sum_abs += l * fabs(val);
total_size += l;
}
}
G_debug(3, "sum = %f total_size = %f", sum, total_size);
}
}
}
if (otype & GV_AREA) {
nareas = Vect_get_num_areas(&Map);
for (area = 1; area <= nareas; area++) {
int i, centr;
G_debug(3, "area = %d", area);
centr = Vect_get_area_centroid(&Map, area);
if (centr < 1)
continue;
G_debug(3, "centr = %d", centr);
Vect_read_line(&Map, NULL, Cats, centr);
for (i = 0; i < Cats->n_cats; i++) {
if (Cats->field[i] == ofield) {
double val;
dbCatVal *catval;
G_debug(3, "cat = %d", Cats->cat[i]);
if (db_CatValArray_get_value
(&Cvarr, Cats->cat[i], &catval) != DB_OK) {
G_debug(3, "No record for cat = %d", Cats->cat[i]);
nmissing++;
continue;
}
if (catval->isNull) {
G_debug(3, "NULL value for cat = %d", Cats->cat[i]);
nnull++;
continue;
}
if (ctype == DB_C_TYPE_INT) {
val = catval->val.i;
}
else if (ctype == DB_C_TYPE_DOUBLE) {
val = catval->val.d;
}
count++;
if (first) {
max = val;
min = val;
first = 0;
}
else {
if (val > max)
max = val;
if (val < min)
min = val;
}
if (compatible) {
double a;
a = Vect_get_area_area(&Map, area);
sum += a * val;
sumsq += a * val * val;
sumcb += a * val * val * val;
sumqt += a * val * val * val * val;
sum_abs += a * fabs(val);
total_size += a;
}
G_debug(4, "sum = %f total_size = %f", sum, total_size);
}
}
}
}
G_debug(2, "sum = %f total_size = %f", sum, total_size);
if (compatible) {
if ((otype & GV_LINES) || (otype & GV_AREA)) {
mean = sum / total_size;
mean_abs = sum_abs / total_size;
/* Roger Bivand says it is wrong see GRASS devel list 7/2004 */
/*
pop_variance = (sumsq - sum*sum/total_size)/total_size;
pop_stdev = sqrt(pop_variance);
*/
}
else {
double n = count;
mean = sum / count;
mean_abs = sum_abs / count;
pop_variance = (sumsq - sum * sum / count) / count;
pop_stdev = sqrt(pop_variance);
pop_coeff_variation = pop_stdev / (sqrt(sum * sum) / count);
sample_variance = (sumsq - sum * sum / count) / (count - 1);
sample_stdev = sqrt(sample_variance);
kurtosis =
(sumqt / count - 4 * sum * sumcb / (n * n) +
6 * sum * sum * sumsq / (n * n * n) -
3 * sum * sum * sum * sum / (n * n * n * n))
/ (sample_stdev * sample_stdev * sample_stdev *
sample_stdev) - 3;
skewness =
(sumcb / n - 3 * sum * sumsq / (n * n) +
2 * sum * sum * sum / (n * n * n))
/ (sample_stdev * sample_stdev * sample_stdev);
}
}
G_debug(3, "otype %d:", otype);
if (shell_flag->answer) {
fprintf(stdout, "n=%d\n", count);
fprintf(stdout, "nmissing=%d\n", nmissing);
fprintf(stdout, "nnull=%d\n", nnull);
if (count > 0) {
fprintf(stdout, "min=%g\n", min);
fprintf(stdout, "max=%g\n", max);
fprintf(stdout, "range=%g\n", max - min);
if (compatible && (otype & GV_POINTS)) {
fprintf(stdout, "mean=%g\n", mean);
fprintf(stdout, "mean_abs=%g\n", mean_abs);
fprintf(stdout, "population_stddev=%g\n", pop_stdev);
fprintf(stdout, "population_variance=%g\n", pop_variance);
fprintf(stdout, "population_coeff_variation=%g\n",
pop_coeff_variation);
if (otype & GV_POINTS) {
fprintf(stdout, "sample_stddev=%g\n", sample_stdev);
fprintf(stdout, "sample_variance=%g\n", sample_variance);
fprintf(stdout, "kurtosis=%g\n", kurtosis);
fprintf(stdout, "skewness=%g\n", skewness);
}
}
}
}
else {
fprintf(stdout, "number of features with non NULL attribute: %d\n",
count);
fprintf(stdout, "number of missing attributes: %d\n", nmissing);
fprintf(stdout, "number of NULL attributes: %d\n", nnull);
if (count > 0) {
fprintf(stdout, "minimum: %g\n", min);
fprintf(stdout, "maximum: %g\n", max);
fprintf(stdout, "range: %g\n", max - min);
if (compatible && (otype & GV_POINTS)) {
fprintf(stdout, "mean: %g\n", mean);
fprintf(stdout, "mean of absolute values: %g\n", mean_abs);
fprintf(stdout, "population standard deviation: %g\n",
pop_stdev);
fprintf(stdout, "population variance: %g\n", pop_variance);
fprintf(stdout, "population coefficient of variation: %g\n",
pop_coeff_variation);
if (otype & GV_POINTS) {
fprintf(stdout, "sample standard deviation: %g\n",
sample_stdev);
fprintf(stdout, "sample variance: %g\n", sample_variance);
fprintf(stdout, "kurtosis: %g\n", kurtosis);
fprintf(stdout, "skewness: %g\n", skewness);
}
}
}
}
/* TODO: mode, skewness, kurtosis */
if (extended->answer && compatible && (otype & GV_POINTS) && count > 0) {
double quartile_25 = 0.0, quartile_75 = 0.0, quartile_perc = 0.0;
double median = 0.0;
int qpos_25, qpos_75, qpos_perc;
qpos_25 = (int)(count * 0.25 - 0.5);
qpos_75 = (int)(count * 0.75 - 0.5);
qpos_perc = (int)(count * perc / 100. - 0.5);
if (db_CatValArray_sort_by_value(&Cvarr) != DB_OK)
G_fatal_error(_("Cannot sort the key/value array"));
if (Cvarr.ctype == DB_C_TYPE_INT) {
quartile_25 = (Cvarr.value[qpos_25]).val.i;
if (count % 2) /* odd */
median = (Cvarr.value[(int)(count / 2)]).val.i;
else /* even */
median =
((Cvarr.value[count / 2 - 1]).val.i +
(Cvarr.value[count / 2]).val.i) / 2.0;
quartile_75 = (Cvarr.value[qpos_75]).val.i;
quartile_perc = (Cvarr.value[qpos_perc]).val.i;
}
else { /* must be DB_C_TYPE_DOUBLE */
quartile_25 = (Cvarr.value[qpos_25]).val.d;
if (count % 2) /* odd */
median = (Cvarr.value[(int)(count / 2)]).val.d;
else /* even */
median =
((Cvarr.value[count / 2 - 1]).val.d +
(Cvarr.value[count / 2]).val.d) / 2.0;
quartile_75 = (Cvarr.value[qpos_75]).val.d;
quartile_perc = (Cvarr.value[qpos_perc]).val.d;
}
if (shell_flag->answer) {
fprintf(stdout, "first_quartile=%g\n", quartile_25);
fprintf(stdout, "median=%g\n", median);
fprintf(stdout, "third_quartile=%g\n", quartile_75);
fprintf(stdout, "percentile_%d=%g\n", perc, quartile_perc);
}
else {
fprintf(stdout, "1st quartile: %g\n", quartile_25);
if (count % 2)
fprintf(stdout, "median (odd number of cells): %g\n", median);
else
fprintf(stdout, "median (even number of cells): %g\n",
median);
fprintf(stdout, "3rd quartile: %g\n", quartile_75);
if (perc % 10 == 1 && perc != 11)
fprintf(stdout, "%dst percentile: %g\n", perc, quartile_perc);
else if (perc % 10 == 2 && perc != 12)
fprintf(stdout, "%dnd percentile: %g\n", perc, quartile_perc);
else if (perc % 10 == 3 && perc != 13)
fprintf(stdout, "%drd percentile: %g\n", perc, quartile_perc);
else
fprintf(stdout, "%dth percentile: %g\n", perc, quartile_perc);
}
}
Vect_close(&Map);
exit(EXIT_SUCCESS);
}
int execute_random(struct rr_state *theState)
{
long nt;
long nc;
struct Cell_head window;
int nrows, ncols, row, col;
int infd, cinfd, outfd;
struct Map_info Out;
struct field_info *fi;
dbTable *table;
dbColumn *column;
dbString sql;
dbDriver *driver;
struct line_pnts *Points;
struct line_cats *Cats;
int cat;
RASTER_MAP_TYPE type;
int do_check;
G_get_window(&window);
nrows = Rast_window_rows();
ncols = Rast_window_cols();
/* open the data files, input raster should be set-up already */
if ((infd = theState->fd_old) < 0)
G_fatal_error(_("Unable to open raster map <%s>"),
theState->inraster);
if (theState->docover == TRUE) {
if ((cinfd = theState->fd_cold) < 0)
G_fatal_error(_("Unable to open raster map <%s>"),
theState->inrcover);
}
if (theState->outraster != NULL) {
if (theState->docover == TRUE)
type = theState->cover.type;
else
type = theState->buf.type;
outfd = Rast_open_new(theState->outraster, type);
theState->fd_new = outfd;
}
if (theState->outvector) {
if (Vect_open_new(&Out, theState->outvector, theState->z_geometry) < 0)
G_fatal_error(_("Unable to create vector map <%s>"),
theState->outvector);
Vect_hist_command(&Out);
fi = Vect_default_field_info(&Out, 1, NULL, GV_1TABLE);
driver =
db_start_driver_open_database(fi->driver,
Vect_subst_var(fi->database, &Out));
if (!driver)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Vect_subst_var(fi->database, &Out), fi->driver);
db_set_error_handler_driver(driver);
Vect_map_add_dblink(&Out, 1, NULL, fi->table, GV_KEY_COLUMN, fi->database,
fi->driver);
if (theState->docover == TRUE)
table = db_alloc_table(3);
else
table = db_alloc_table(2);
db_set_table_name(table, fi->table);
column = db_get_table_column(table, 0);
db_set_column_name(column, GV_KEY_COLUMN);
db_set_column_sqltype(column, DB_SQL_TYPE_INTEGER);
column = db_get_table_column(table, 1);
db_set_column_name(column, "value");
db_set_column_sqltype(column, DB_SQL_TYPE_DOUBLE_PRECISION);
if (theState->docover == TRUE) {
column = db_get_table_column(table, 2);
db_set_column_name(column, "covervalue");
db_set_column_sqltype(column, DB_SQL_TYPE_DOUBLE_PRECISION);
}
if (db_create_table(driver, table) != DB_OK)
G_warning(_("Cannot create new table"));
db_begin_transaction(driver);
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
db_init_string(&sql);
}
if (theState->outvector && theState->outraster)
G_message(_("Writing raster map <%s> and vector map <%s> ..."),
theState->outraster, theState->outvector);
else if (theState->outraster)
G_message(_("Writing raster map <%s> ..."), theState->outraster);
else if (theState->outvector)
G_message(_("Writing vector map <%s> ..."), theState->outvector);
G_percent(0, theState->nRand, 2);
init_rand();
nc = (theState->use_nulls) ? theState->nCells :
theState->nCells - theState->nNulls;
nt = theState->nRand; /* Number of points to generate */
cat = 1;
/* Execute for loop for every row if nt>1 */
for (row = 0; row < nrows && nt; row++) {
Rast_get_row(infd, theState->buf.data.v, row, theState->buf.type);
if (theState->docover == TRUE) {
Rast_get_row(cinfd, theState->cover.data.v, row,
theState->cover.type);
}
for (col = 0; col < ncols && nt; col++) {
do_check = 0;
if (theState->use_nulls || !is_null_value(theState->buf, col))
do_check = 1;
if (do_check && theState->docover == TRUE) { /* skip no data cover points */
if (!theState->use_nulls &&
is_null_value(theState->cover, col))
do_check = 0;
}
if (do_check && make_rand() % nc < nt) {
nt--;
if (is_null_value(theState->buf, col))
cpvalue(&theState->nulls, 0, &theState->buf, col);
if (theState->docover == TRUE) {
if (is_null_value(theState->cover, col))
cpvalue(&theState->cnulls, 0, &theState->cover, col);
}
if (theState->outvector) {
double x, y, val, coverval;
char buf[500];
Vect_reset_line(Points);
Vect_reset_cats(Cats);
x = window.west + (col + .5) * window.ew_res;
y = window.north - (row + .5) * window.ns_res;
val = cell_as_dbl(&theState->buf, col);
if (theState->docover == 1)
coverval = cell_as_dbl(&theState->cover, col);
if (theState->z_geometry)
Vect_append_point(Points, x, y, val);
else
Vect_append_point(Points, x, y, 0.0);
Vect_cat_set(Cats, 1, cat);
Vect_write_line(&Out, GV_POINT, Points, Cats);
if (theState->docover == 1)
if (is_null_value(theState->cover, col))
sprintf(buf,
"insert into %s values ( %d, %f, NULL )",
fi->table, cat, val);
else
sprintf(buf,
"insert into %s values ( %d, %f, %f )",
fi->table, cat, val, coverval);
else
sprintf(buf, "insert into %s values ( %d, %f )",
fi->table, cat, val);
db_set_string(&sql, buf);
if (db_execute_immediate(driver, &sql) != DB_OK)
G_fatal_error(_("Cannot insert new record: %s"),
db_get_string(&sql));
cat++;
}
G_percent((theState->nRand - nt), theState->nRand, 2);
}
else {
set_to_null(&theState->buf, col);
if (theState->docover == 1)
set_to_null(&theState->cover, col);
}
if (do_check)
nc--;
}
while (col < ncols) {
set_to_null(&theState->buf, col);
if (theState->docover == 1)
set_to_null(&theState->cover, col);
col++;
}
if (theState->outraster) {
if (theState->docover == 1)
Rast_put_row(outfd, theState->cover.data.v,
theState->cover.type);
else
Rast_put_row(outfd, theState->buf.data.v,
theState->buf.type);
}
}
/* Catch any remaining rows in the window */
if (theState->outraster && row < nrows) {
for (col = 0; col < ncols; col++) {
if (theState->docover == 1)
set_to_null(&theState->cover, col);
else
set_to_null(&theState->buf, col);
}
for (; row < nrows; row++) {
if (theState->docover == 1)
Rast_put_row(outfd, theState->cover.data.v,
theState->cover.type);
else
Rast_put_row(outfd, theState->buf.data.v,
theState->buf.type);
}
}
if (nt > 0)
G_warning(_("Only [%ld] random points created"),
theState->nRand - nt);
/* close files */
Rast_close(infd);
if (theState->docover == TRUE)
Rast_close(cinfd);
if (theState->outvector) {
db_commit_transaction(driver);
if (db_create_index2(driver, fi->table, GV_KEY_COLUMN) != DB_OK)
G_warning(_("Unable to create index"));
if (db_grant_on_table
(driver, fi->table, DB_PRIV_SELECT,
DB_GROUP | DB_PUBLIC) != DB_OK) {
G_fatal_error(_("Unable to grant privileges on table <%s>"),
fi->table);
}
db_close_database_shutdown_driver(driver);
if (theState->notopol != 1)
Vect_build(&Out);
Vect_close(&Out);
}
if (theState->outraster)
Rast_close(outfd);
return 0;
} /* execute_random() */
int main(int argc, char *argv[])
{
int i, cat, with_z, more, ctype, nrows;
char buf[DB_SQL_MAX];
int count;
double coor[3];
int ncoor;
struct Option *driver_opt, *database_opt, *table_opt;
struct Option *xcol_opt, *ycol_opt, *zcol_opt, *keycol_opt, *where_opt,
*outvect;
struct Flag *same_table_flag;
struct GModule *module;
struct Map_info Map;
struct line_pnts *Points;
struct line_cats *Cats;
dbString sql;
dbDriver *driver;
dbCursor cursor;
dbTable *table;
dbColumn *column;
dbValue *value;
struct field_info *fi;
G_gisinit(argv[0]);
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("import"));
G_add_keyword(_("database"));
G_add_keyword(_("points"));
module->description =
_("Creates new vector (points) map from database table containing coordinates.");
table_opt = G_define_standard_option(G_OPT_DB_TABLE);
table_opt->required = YES;
table_opt->description = _("Input table name");
driver_opt = G_define_standard_option(G_OPT_DB_DRIVER);
driver_opt->options = db_list_drivers();
driver_opt->answer = (char *)db_get_default_driver_name();
driver_opt->guisection = _("Input DB");
database_opt = G_define_standard_option(G_OPT_DB_DATABASE);
database_opt->answer = (char *)db_get_default_database_name();
database_opt->guisection = _("Input DB");
xcol_opt = G_define_standard_option(G_OPT_DB_COLUMN);
xcol_opt->key = "x";
xcol_opt->required = YES;
xcol_opt->description = _("Name of column containing x coordinate");
ycol_opt = G_define_standard_option(G_OPT_DB_COLUMN);
ycol_opt->key = "y";
ycol_opt->required = YES;
ycol_opt->description = _("Name of column containing y coordinate");
zcol_opt = G_define_standard_option(G_OPT_DB_COLUMN);
zcol_opt->key = "z";
zcol_opt->description = _("Name of column containing z coordinate");
zcol_opt->guisection = _("3D output");
keycol_opt = G_define_standard_option(G_OPT_DB_COLUMN);
keycol_opt->key = "key";
keycol_opt->required = NO;
keycol_opt->label = _("Name of column containing category number");
keycol_opt->description = _("Must refer to an integer column");
where_opt = G_define_standard_option(G_OPT_DB_WHERE);
where_opt->guisection = _("Selection");
outvect = G_define_standard_option(G_OPT_V_OUTPUT);
same_table_flag = G_define_flag();
same_table_flag->key = 't';
same_table_flag->description =
_("Use imported table as attribute table for new map");
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
if (zcol_opt->answer) {
with_z = WITH_Z;
ncoor = 3;
}
else {
with_z = WITHOUT_Z;
ncoor = 2;
}
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
db_init_string(&sql);
if (G_get_overwrite()) {
/* We don't want to delete the input table when overwriting the output
* vector. */
char name[GNAME_MAX], mapset[GMAPSET_MAX];
if (!G_name_is_fully_qualified(outvect->answer, name, mapset)) {
strcpy(name, outvect->answer);
strcpy(mapset, G_mapset());
}
Vect_set_open_level(1); /* no topo needed */
if (strcmp(mapset, G_mapset()) == 0 && G_find_vector2(name, mapset) &&
Vect_open_old(&Map, name, mapset) >= 0) {
int num_dblinks;
num_dblinks = Vect_get_num_dblinks(&Map);
for (i = 0; i < num_dblinks; i++) {
if ((fi = Vect_get_dblink(&Map, i)) != NULL &&
strcmp(fi->driver, driver_opt->answer) == 0 &&
strcmp(fi->database, database_opt->answer) == 0 &&
strcmp(fi->table, table_opt->answer) == 0)
G_fatal_error(_("Vector map <%s> cannot be overwritten "
"because input table <%s> is linked to "
"this map."),
outvect->answer, table_opt->answer);
}
Vect_close(&Map);
}
}
if (Vect_open_new(&Map, outvect->answer, with_z) < 0)
G_fatal_error(_("Unable to create vector map <%s>"),
outvect->answer);
Vect_set_error_handler_io(NULL, &Map);
Vect_hist_command(&Map);
fi = Vect_default_field_info(&Map, 1, NULL, GV_1TABLE);
/* Open driver */
driver = db_start_driver_open_database(driver_opt->answer,
database_opt->answer);
if (driver == NULL) {
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
fi->database, fi->driver);
}
db_set_error_handler_driver(driver);
/* check if target table already exists */
G_debug(3, "Output vector table <%s>, driver: <%s>, database: <%s>",
outvect->answer, db_get_default_driver_name(),
db_get_default_database_name());
if (!same_table_flag->answer &&
db_table_exists(db_get_default_driver_name(),
db_get_default_database_name(), outvect->answer) == 1)
G_fatal_error(_("Output vector map, table <%s> (driver: <%s>, database: <%s>) "
"already exists"), outvect->answer,
db_get_default_driver_name(),
db_get_default_database_name());
if (keycol_opt->answer) {
int coltype;
coltype = db_column_Ctype(driver, table_opt->answer, keycol_opt->answer);
if (coltype == -1)
G_fatal_error(_("Column <%s> not found in table <%s>"),
keycol_opt->answer, table_opt->answer);
if (coltype != DB_C_TYPE_INT)
G_fatal_error(_("Data type of key column must be integer"));
}
else {
if (same_table_flag->answer) {
G_fatal_error(_("Option <%s> must be specified when -%c flag is given"),
keycol_opt->key, same_table_flag->key);
}
if (strcmp(db_get_default_driver_name(), "sqlite") != 0)
G_fatal_error(_("Unable to define key column. This operation is not supported "
"by <%s> driver. You need to define <%s> option."),
fi->driver, keycol_opt->key);
}
/* Open select cursor */
sprintf(buf, "SELECT %s, %s", xcol_opt->answer, ycol_opt->answer);
db_set_string(&sql, buf);
if (with_z) {
sprintf(buf, ", %s", zcol_opt->answer);
db_append_string(&sql, buf);
}
if (keycol_opt->answer) {
sprintf(buf, ", %s", keycol_opt->answer);
db_append_string(&sql, buf);
}
sprintf(buf, " FROM %s", table_opt->answer);
db_append_string(&sql, buf);
if (where_opt->answer) {
sprintf(buf, " WHERE %s", where_opt->answer);
db_append_string(&sql, buf);
}
G_debug(2, "SQL: %s", db_get_string(&sql));
if (db_open_select_cursor(driver, &sql, &cursor, DB_SEQUENTIAL) != DB_OK) {
G_fatal_error(_("Unable to open select cursor: '%s'"),
db_get_string(&sql));
}
table = db_get_cursor_table(&cursor);
nrows = db_get_num_rows(&cursor);
G_debug(2, "%d points selected", nrows);
count = cat = 0;
G_message(_("Writing features..."));
while (db_fetch(&cursor, DB_NEXT, &more) == DB_OK && more) {
G_percent(count, nrows, 2);
/* key column */
if (keycol_opt->answer) {
column = db_get_table_column(table, with_z ? 3 : 2);
ctype = db_sqltype_to_Ctype(db_get_column_sqltype(column));
if (ctype != DB_C_TYPE_INT)
G_fatal_error(_("Key column must be integer"));
value = db_get_column_value(column);
cat = db_get_value_int(value);
}
else {
cat++;
}
/* coordinates */
for (i = 0; i < ncoor; i++) {
column = db_get_table_column(table, i);
ctype = db_sqltype_to_Ctype(db_get_column_sqltype(column));
if (ctype != DB_C_TYPE_INT && ctype != DB_C_TYPE_DOUBLE)
G_fatal_error(_("x/y/z column must be integer or double"));
value = db_get_column_value(column);
if (ctype == DB_C_TYPE_INT)
coor[i] = (double)db_get_value_int(value);
else
coor[i] = db_get_value_double(value);
}
Vect_reset_line(Points);
Vect_reset_cats(Cats);
Vect_append_point(Points, coor[0], coor[1], coor[2]);
Vect_cat_set(Cats, 1, cat);
Vect_write_line(&Map, GV_POINT, Points, Cats);
count++;
}
G_percent(1, 1, 1);
/* close connection to input DB before copying attributes */
db_close_database_shutdown_driver(driver);
/* Copy table */
if (!same_table_flag->answer) {
G_message(_("Copying attributes..."));
if (DB_FAILED == db_copy_table_where(driver_opt->answer, database_opt->answer,
table_opt->answer,
fi->driver, fi->database, fi->table,
where_opt->answer)) { /* where can be NULL */
G_warning(_("Unable to copy table"));
}
else {
Vect_map_add_dblink(&Map, 1, NULL, fi->table,
keycol_opt->answer ? keycol_opt->answer : GV_KEY_COLUMN,
fi->database, fi->driver);
}
if (!keycol_opt->answer) {
/* TODO: implement for all DB drivers in generic way if
* possible */
driver = db_start_driver_open_database(fi->driver, fi->database);
if (driver == NULL) {
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
fi->database, fi->driver);
}
db_set_error_handler_driver(driver);
/* add key column */
sprintf(buf, "ALTER TABLE %s ADD COLUMN %s INTEGER",
fi->table, GV_KEY_COLUMN);
db_set_string(&sql, buf);
if (db_execute_immediate(driver, &sql) != DB_OK) {
G_fatal_error(_("Unable to add key column <%s>: "
"SERIAL type is not supported by <%s>"),
GV_KEY_COLUMN, fi->driver);
}
/* update key column */
sprintf(buf, "UPDATE %s SET %s = _ROWID_",
fi->table, GV_KEY_COLUMN);
db_set_string(&sql, buf);
if (db_execute_immediate(driver, &sql) != DB_OK) {
G_fatal_error(_("Failed to update key column <%s>"),
GV_KEY_COLUMN);
}
}
}
else {
/* do not copy attributes, link original table */
Vect_map_add_dblink(&Map, 1, NULL, table_opt->answer,
keycol_opt->answer ? keycol_opt->answer : GV_KEY_COLUMN,
database_opt->answer, driver_opt->answer);
}
Vect_build(&Map);
Vect_close(&Map);
G_done_msg(_n("%d point written to vector map.",
"%d points written to vector map.",
count), count);
return (EXIT_SUCCESS);
}
/*-------------------------------------------------------------------------------------------*/
int cross_correlation(struct Map_info *Map, double passWE, double passNS)
/*
Map: Vector map from which cross-crorrelation will take values
passWE: spline step in West-East direction
passNS: spline step in North-South direction
RETURN:
TRUE on success
FALSE on failure
*/
{
int bilin = TRUE; /*booleans */
int nsplx, nsply, nparam_spl, ndata;
double *mean, *rms, *stdev;
/* double lambda[PARAM_LAMBDA] = { 0.0001, 0.001, 0.01, 0.1, 1.0, 10.0 }; */ /* Fixed values (by the moment) */
double lambda[PARAM_LAMBDA] = { 0.0001, 0.001, 0.005, 0.01, 0.02, 0.05 }; /* Fixed values (by the moment) */
/* a more exhaustive search:
#define PARAM_LAMBDA 11
double lambda[PARAM_LAMBDA] = { 0.0001, 0.0005, 0.001, 0.005, 0.01, 0.05, 0.1, 0.5, 1.0, 5.0, 10.0 }; */
double *TN, *Q, *parVect; /* Interpolation and least-square vectors */
double **N, **obsVect; /* Interpolation and least-square matrix */
struct Point *observ;
struct Stats stat_vect;
/*struct line_pnts *points; */
/*struct line_cats *Cats; */
struct Cell_head region;
G_get_window(®ion);
extern int bspline_field;
extern char *bspline_column;
dbCatValArray cvarr;
G_debug(5,
"CrossCorrelation: Some tests using different lambda_i values will be done");
ndata = Vect_get_num_lines(Map);
if (ndata > NDATA_MAX)
G_warning(_("%d are too many points. "
"The cross validation would take too much time."), ndata);
/*points = Vect_new_line_struct (); */
/*Cats = Vect_new_cats_struct (); */
/* Current region is read and points recorded into observ */
observ = P_Read_Vector_Region_Map(Map, ®ion, &ndata, 1024, 1);
G_debug(5, "CrossCorrelation: %d points read in region. ", ndata);
G_verbose_message(_("%d points read in region"),
ndata);
if (ndata > 50)
G_warning(_("Maybe it takes too long. "
"It will depend on how many points you are considering."));
else
G_debug(5, "CrossCorrelation: It shouldn't take too long.");
if (ndata > 0) { /* If at least one point is in the region */
int i, j, lbd; /* lbd: lambda index */
int BW;
double mean_reg, *obs_mean;
int nrec, ctype = 0, verbosity;
struct field_info *Fi;
dbDriver *driver_cats;
mean = G_alloc_vector(PARAM_LAMBDA); /* Alloc as much mean, rms and stdev values as the total */
rms = G_alloc_vector(PARAM_LAMBDA); /* number of parameter used used for cross validation */
stdev = G_alloc_vector(PARAM_LAMBDA);
verbosity = G_verbose(); /* store for later reset */
/* Working with attributes */
if (bspline_field > 0) {
db_CatValArray_init(&cvarr);
Fi = Vect_get_field(Map, bspline_field);
if (Fi == NULL)
G_fatal_error(_("Database connection not defined for layer %d"),
bspline_field);
driver_cats =
db_start_driver_open_database(Fi->driver, Fi->database);
G_debug(1, _("CrossCorrelation: driver=%s db=%s"), Fi->driver,
Fi->database);
if (driver_cats == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
nrec =
db_select_CatValArray(driver_cats, Fi->table, Fi->key,
bspline_column, NULL, &cvarr);
G_debug(3, "nrec = %d", nrec);
ctype = cvarr.ctype;
if (ctype != DB_C_TYPE_INT && ctype != DB_C_TYPE_DOUBLE)
G_fatal_error(_("Column type not supported"));
if (nrec < 0)
G_fatal_error(_("No records selected from table <%s> "),
Fi->table);
G_debug(1, "%d records selected from table",
nrec);
db_close_database_shutdown_driver(driver_cats);
}
/* Setting number of splines as a function of WE and SN spline steps */
nsplx = ceil((region.east - region.west) / passWE);
nsply = ceil((region.north - region.south) / passNS);
nparam_spl = nsplx * nsply; /* Total number of splines */
if (nparam_spl > 22900)
G_fatal_error(_("Too many splines (%d x %d). "
"Consider changing spline steps \"ew_step=\" \"ns_step=\"."),
nsplx, nsply);
BW = P_get_BandWidth(bilin, nsply);
/**/
/*Least Squares system */
N = G_alloc_matrix(nparam_spl, BW); /* Normal matrix */
TN = G_alloc_vector(nparam_spl); /* vector */
parVect = G_alloc_vector(nparam_spl); /* Parameters vector */
obsVect = G_alloc_matrix(ndata, 3); /* Observation vector */
Q = G_alloc_vector(ndata); /* "a priori" var-cov matrix */
obs_mean = G_alloc_vector(ndata);
stat_vect = alloc_Stats(ndata);
for (lbd = 0; lbd < PARAM_LAMBDA; lbd++) { /* For each lambda value */
G_message(_("Beginning cross validation with "
"lambda_i=%.4f ... (%d of %d)"), lambda[lbd],
lbd+1, PARAM_LAMBDA);
/*
How the cross correlation algorithm is done:
For each cycle, only the first ndata-1 "observ" elements are considered for the
interpolation. Within every interpolation mean is calculated to lowering edge
errors. The point left out will be used for an estimation. The error between the
estimation and the observation is recorded for further statistics.
At the end of the cycle, the last point, that is, the ndata-1 index, and the point
with j index are swapped.
*/
for (j = 0; j < ndata; j++) { /* Cross Correlation will use all ndata points */
double out_x, out_y, out_z; /* This point is left out */
for (i = 0; i < ndata; i++) { /* Each time, only the first ndata-1 points */
double dval; /* are considered in the interpolation */
/* Setting obsVect vector & Q matrix */
Q[i] = 1; /* Q=I */
obsVect[i][0] = observ[i].coordX;
obsVect[i][1] = observ[i].coordY;
if (bspline_field > 0) {
int cat, ival, ret;
/*type = Vect_read_line (Map, points, Cats, observ[i].lineID); */
/*if ( !(type & GV_POINTS ) ) continue; */
/*Vect_cat_get ( Cats, bspline_field, &cat ); */
cat = observ[i].cat;
if (cat < 0)
continue;
if (ctype == DB_C_TYPE_INT) {
ret =
db_CatValArray_get_value_int(&cvarr, cat,
&ival);
obsVect[i][2] = ival;
obs_mean[i] = ival;
}
else { /* DB_C_TYPE_DOUBLE */
ret =
db_CatValArray_get_value_double(&cvarr, cat,
&dval);
obsVect[i][2] = dval;
obs_mean[i] = dval;
}
if (ret != DB_OK) {
G_warning(_("No record for point (cat = %d)"),
cat);
continue;
}
}
else {
obsVect[i][2] = observ[i].coordZ;
obs_mean[i] = observ[i].coordZ;
}
} /* i index */
/* Mean calculation for every point less the last one */
mean_reg = calc_mean(obs_mean, ndata - 1);
for (i = 0; i < ndata; i++)
obsVect[i][2] -= mean_reg;
/* This is left out */
out_x = observ[ndata - 1].coordX;
out_y = observ[ndata - 1].coordY;
out_z = obsVect[ndata - 1][2];
if (bilin) { /* Bilinear interpolation */
normalDefBilin(N, TN, Q, obsVect, passWE, passNS, nsplx,
nsply, region.west, region.south,
ndata - 1, nparam_spl, BW);
nCorrectGrad(N, lambda[lbd], nsplx, nsply, passWE,
passNS);
}
else { /* Bicubic interpolation */
normalDefBicubic(N, TN, Q, obsVect, passWE, passNS, nsplx,
nsply, region.west, region.south,
ndata - 1, nparam_spl, BW);
nCorrectGrad(N, lambda[lbd], nsplx, nsply, passWE,
passNS);
}
/*
if (bilin) interpolation (&interp, P_BILINEAR);
else interpolation (&interp, P_BICUBIC);
*/
G_set_verbose(G_verbose_min());
G_math_solver_cholesky_sband(N, parVect, TN, nparam_spl, BW);
G_set_verbose(verbosity);
/* Estimation of j-point */
if (bilin)
stat_vect.estima[j] =
dataInterpolateBilin(out_x, out_y, passWE, passNS,
nsplx, nsply, region.west,
region.south, parVect);
else
stat_vect.estima[j] =
dataInterpolateBilin(out_x, out_y, passWE, passNS,
nsplx, nsply, region.west,
region.south, parVect);
/* Difference between estimated and observated i-point */
stat_vect.error[j] = out_z - stat_vect.estima[j];
G_debug(1, "CrossCorrelation: stat_vect.error[%d] = %lf", j,
stat_vect.error[j]);
/* Once the last value is left out, it is swapped with j-value */
observ = swap(observ, j, ndata - 1);
G_percent(j, ndata, 2);
}
mean[lbd] = calc_mean(stat_vect.error, stat_vect.n_points);
rms[lbd] =
calc_root_mean_square(stat_vect.error, stat_vect.n_points);
stdev[lbd] =
calc_standard_deviation(stat_vect.error, stat_vect.n_points);
G_message(_("Mean = %.5lf"), mean[lbd]);
G_message(_("Root Mean Square (RMS) = %.5lf"),
rms[lbd]);
G_message("---");
} /* ENDFOR each lambda value */
G_free_matrix(N);
G_free_vector(TN);
G_free_vector(Q);
G_free_matrix(obsVect);
G_free_vector(parVect);
#ifdef nodef
/*TODO: if the minimum lambda is wanted, the function declaration must be changed */
/* At this moment, consider rms only */
rms_min = find_minimum(rms, &lbd_min);
stdev_min = find_minimum(stdev, &lbd_min);
/* Writing some output */
G_message(_("Different number of splines and lambda_i values have "
"been taken for the cross correlation"));
G_message(_("The minimum value for the test (rms=%lf) was "
"obtained with: lambda_i = %.3f"),
rms_min,
lambda[lbd_min]);
*lambda_min = lambda[lbd_min];
#endif
G_message(_("Table of results:"));
fprintf(stdout, _(" lambda | mean | rms |\n"));
for (lbd = 0; lbd < PARAM_LAMBDA; lbd++) {
fprintf(stdout, " %9.5f | %10.4f | %10.4f |\n", lambda[lbd],
mean[lbd], rms[lbd]);
}
G_free_vector(mean);
G_free_vector(rms);
} /* ENDIF (ndata > 0) */
else
G_warning(_("No point lies into the current region"));
G_free(observ);
return TRUE;
}